HHsearch alignment for GI: peg_472 and conserved domain: PRK07132
>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=0 Score=374.31 Aligned_cols=297 Identities=15% Similarity=0.187 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 48999999999982876706201078798888999999999614687778866587899977999977987782224533
Q 537021.9.peg.4 4 QKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAA 83 (369)
Q Consensus 4 q~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~ 83 (369)
T Consensus 3 ~e~iv~~L~nai~~~klsHAYLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~----~~~~~~------~~~~~id~~~~--- 69 (303)
T PRK07132 3 DNNIIKSLDNLAKQNKISHSFLLKSNYNNDLDESILYFLNKFNNLQSLNL----NLEELP------YNIFLFDIFDE--- 69 (303)
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC----CCCCCC------CCCEEECCCCC---
T ss_conf 03899999999984997616886789986799999999999729987888----754565------32304133222---
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 22334555665554456542-04652377511566480016789999972122111466506754330356754333210
Q 537021.9.peg.4 84 SHTSIDDVREIIDQIYYKPI-SARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRFDL 162 (369)
Q Consensus 84 s~~~id~ir~l~~~~~~~p~-~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~~f 162 (369)
T Consensus 70 -~i~~~~i~~~i~~~~~~~~~~~~~Kv~IIdea~~lt~~A~NaLLKtLEEPp~~~~fil~t~~~~~il~TI~SRCq~~~f 148 (303)
T PRK07132 70 -DLSKEEFLSAIEKFSFSSFVSNQKKILIIKNIEKTSNSSLNALLKTIEEPSKNTYFLLTTKNINKVIPTIVSRCQVINV 148 (303)
T ss_pred -CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCHHHHHCCEEEEC
T ss_conf -0016889999999973665568706999816553399999999987038986848999728824383778636656637
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 24540013567876431013456256644565316764200110001110000001210322000135677777888876
Q 537021.9.peg.4 163 HRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCNDKIVTSSVRLMLALADRNRIMDLFGY 242 (369)
Q Consensus 163 ~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~~i~~e~v~~llg~~~~~~i~~Ll~a 242 (369)
T Consensus 149 ~~~~~~~i~~~l~e----~~--~~~e~~~~~a~~~~-n~~~a~~~~-------~~e-~~~~~~~~---------~~~l~~ 204 (303)
T PRK07132 149 KEPDQQKILAKLLS----QN--KEKEFEKFYAYIFK-NFEDAIKYI-------SKI-SENLVKKF---------IKALNK 204 (303)
T ss_pred CCCCHHHHHHHHHH----CC--CCCHHHHHHHHHHC-CHHHHHHHH-------HHH-HHHHHHHH---------HHHHHH
T ss_conf 88999999999986----47--75278999999974-758899998-------642-39999999---------999998
Q ss_pred HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 30136334678876543047621357877753489999997457412234499889999999986299899999999999
Q 537021.9.peg.4 243 LIKGDIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMADTLLYSEAENARALQYSKEVSITFLSRFWQMIL 322 (369)
Q Consensus 243 i~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~lq~l~ 322 (369)
T Consensus 205 ~~~~~-~~~~~fl~~~~~~-~~~~~l~~ll~~~~~~i~~~~~~~~--~~~~k~~~~~~~~~~-----~~~~~~~ii~~id 275 (303)
T PRK07132 205 SLKEK-YSLLIFLNEKLNK-ENALFLVKLLLFYFKSIFLNKKKKK--IKNSKKTFLFEKYKE-----IKISFYKVMTSID 275 (303)
T ss_pred HHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
T ss_conf 74114-7899999988778-4799999999999999988601001--688998999999988-----8878999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 9999830278889999999999953
Q 537021.9.peg.4 323 KGISEIEGFSRPMEAVEMVLIRLAH 347 (369)
Q Consensus 323 ~a~~~Lk~n~np~L~lE~lLlkL~~ 347 (369)
T Consensus 276 ~~~~~L~aNvNF~L~~E~mll~I~e 300 (303)
T PRK07132 276 EFLTKLEQNENFFIQKQAFLLKINI 300 (303)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 9999887034889999999999998