HHsearch alignment for GI: peg_472 and conserved domain: PRK07399

>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=100.00  E-value=0  Score=429.03  Aligned_cols=284  Identities=21%  Similarity=0.297  Sum_probs=216.8

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf             92848999999999982876706201078798888999999999614687778866587899977999977987782224
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVEL   80 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~   80 (369)
T Consensus         6 iiGq~~~~~~L~~ai~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~---------~~~~~~~~r-i~~~nHPDl~~i   75 (314)
T PRK07399          6 LIGQPLAIELLTAAIEQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQG---------SPSKNIRRR-LEEGNHPDLLWV   75 (314)
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC---------CCCCCHHHH-HHCCCCCCEEEE
T ss_conf             2594999999999998599674487789998329999999999985789---------999766558-751899977886


Q ss_pred             CCC-----------------------CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCC
Q ss_conf             533-----------------------223345556655544565420465237751156648001678999997212211
Q 537021.9.peg.4   81 DAA-----------------------SHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHV  137 (369)
Q Consensus        81 ~~~-----------------------s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~  137 (369)
T Consensus        76 ~P~~~~~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~AaNaLLKtLEEP~-~~  154 (314)
T PRK07399         76 EPTYQHQGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEAAANALLKTLEEPG-NG  154 (314)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC-CC
T ss_conf             05620034545577898765302687778799999999997318856884799988978719999999998614787-85


Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHC
Q ss_conf             14665067543303567543332102454001356787643101345625664456531676420011000111000000
Q 537021.9.peg.4  138 KFIFATTEIRKIPITVLSRCQRFDLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCND  217 (369)
Q Consensus       138 ~fil~t~~~~~ll~TI~SRcq~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~  217 (369)
T Consensus       155 ~fILit~~~~~lLpTI~SRCQ~i~F~~l~~~~i~~~L~~~~~~~~~~~~~~---~l~~~A~GspG~a~~~~~~~~~----  227 (314)
T PRK07399        155 TLILIAPSPESLLPTIVSRCQIIPFYRLSDEQLEQVLKRLGDNINEILDHP---ELLALAQGSPGAAIANIEQLQS----  227 (314)
T ss_pred             EEEEEECCHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHH---HHHHHHCCCHHHHHHHHHHHHH----
T ss_conf             699997993649146641875633899899999999997166433102789---9998817997999999999874----


Q ss_pred             CCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf             1210322000135677777888876301363346788765430476213578777-534899999974574122344998
Q 537021.9.peg.4  218 KIVTSSVRLMLALADRNRIMDLFGYLIKGDIINVLQEFSSQYDSGVNPSVILHDL-AEFTHLVTRIKYIPEMADTLLYSE  296 (369)
Q Consensus       218 ~i~~e~v~~llg~~~~~~i~~Ll~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~L-l~~~rdll~~k~~~~~~~~~~~~~  296 (369)
T Consensus       228 -i~-------------~el~~~l~~~-~~~~~~~l~lak~i~~~-------Ld~~~qlwl~~~lq~--------------  271 (314)
T PRK07399        228 -IP-------------PELLQKLEQP-PKNPLEALELAKDISEE-------LDIEQQLWLIDYLQQ--------------  271 (314)
T ss_pred             -CC-------------HHHHHHHHCC-CCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH--------------
T ss_conf             -86-------------9999998624-56899999998861266-------788999999999999--------------


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             8999999998629989999999999999998302788899999999999533
Q 537021.9.peg.4  297 AENARALQYSKEVSITFLSRFWQMILKGISEIEGFSRPMEAVEMVLIRLAHA  348 (369)
Q Consensus       297 ~e~~~i~~~a~~i~~~~L~~~lq~l~~a~~~Lk~n~np~L~lE~lLlkL~~~  348 (369)
T Consensus       272 ----~~w~~~------~~~~~~~~le~~r~~L~~~vqprL~~Ev~ll~l~~~  313 (314)
T PRK07399        272 ----HYWQKT------KNSQLLKKLEKLRKQLLSYVQPRLAWEVTLLELSQE  313 (314)
T ss_pred             ----HHHHHC------CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf             ----999860------037999999999999985288089999999999734