HHsearch alignment for GI: peg_472 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=0 Score=429.03 Aligned_cols=284 Identities=21% Similarity=0.297 Sum_probs=216.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 92848999999999982876706201078798888999999999614687778866587899977999977987782224
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVEL 80 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~ 80 (369)
T Consensus 6 iiGq~~~~~~L~~ai~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~---------~~~~~~~~r-i~~~nHPDl~~i 75 (314)
T PRK07399 6 LIGQPLAIELLTAAIEQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQG---------SPSKNIRRR-LEEGNHPDLLWV 75 (314)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC---------CCCCCHHHH-HHCCCCCCEEEE
T ss_conf 2594999999999998599674487789998329999999999985789---------999766558-751899977886
Q ss_pred CCC-----------------------CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCC
Q ss_conf 533-----------------------223345556655544565420465237751156648001678999997212211
Q 537021.9.peg.4 81 DAA-----------------------SHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHV 137 (369)
Q Consensus 81 ~~~-----------------------s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~ 137 (369)
T Consensus 76 ~P~~~~~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~AaNaLLKtLEEP~-~~ 154 (314)
T PRK07399 76 EPTYQHQGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEAAANALLKTLEEPG-NG 154 (314)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC-CC
T ss_conf 05620034545577898765302687778799999999997318856884799988978719999999998614787-85
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHC
Q ss_conf 14665067543303567543332102454001356787643101345625664456531676420011000111000000
Q 537021.9.peg.4 138 KFIFATTEIRKIPITVLSRCQRFDLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCND 217 (369)
Q Consensus 138 ~fil~t~~~~~ll~TI~SRcq~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~ 217 (369)
T Consensus 155 ~fILit~~~~~lLpTI~SRCQ~i~F~~l~~~~i~~~L~~~~~~~~~~~~~~---~l~~~A~GspG~a~~~~~~~~~---- 227 (314)
T PRK07399 155 TLILIAPSPESLLPTIVSRCQIIPFYRLSDEQLEQVLKRLGDNINEILDHP---ELLALAQGSPGAAIANIEQLQS---- 227 (314)
T ss_pred EEEEEECCHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHH---HHHHHHCCCHHHHHHHHHHHHH----
T ss_conf 699997993649146641875633899899999999997166433102789---9998817997999999999874----
Q ss_pred CCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 1210322000135677777888876301363346788765430476213578777-534899999974574122344998
Q 537021.9.peg.4 218 KIVTSSVRLMLALADRNRIMDLFGYLIKGDIINVLQEFSSQYDSGVNPSVILHDL-AEFTHLVTRIKYIPEMADTLLYSE 296 (369)
Q Consensus 218 ~i~~e~v~~llg~~~~~~i~~Ll~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~L-l~~~rdll~~k~~~~~~~~~~~~~ 296 (369)
T Consensus 228 -i~-------------~el~~~l~~~-~~~~~~~l~lak~i~~~-------Ld~~~qlwl~~~lq~-------------- 271 (314)
T PRK07399 228 -IP-------------PELLQKLEQP-PKNPLEALELAKDISEE-------LDIEQQLWLIDYLQQ-------------- 271 (314)
T ss_pred -CC-------------HHHHHHHHCC-CCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH--------------
T ss_conf -86-------------9999998624-56899999998861266-------788999999999999--------------
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 8999999998629989999999999999998302788899999999999533
Q 537021.9.peg.4 297 AENARALQYSKEVSITFLSRFWQMILKGISEIEGFSRPMEAVEMVLIRLAHA 348 (369)
Q Consensus 297 ~e~~~i~~~a~~i~~~~L~~~lq~l~~a~~~Lk~n~np~L~lE~lLlkL~~~ 348 (369)
T Consensus 272 ----~~w~~~------~~~~~~~~le~~r~~L~~~vqprL~~Ev~ll~l~~~ 313 (314)
T PRK07399 272 ----HYWQKT------KNSQLLKKLEKLRKQLLSYVQPRLAWEVTLLELSQE 313 (314)
T ss_pred ----HHHHHC------CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf ----999860------037999999999999985288089999999999734