HHsearch alignment for GI: peg_472 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=0 Score=466.87 Aligned_cols=311 Identities=22% Similarity=0.282 Sum_probs=260.2
Q ss_pred HHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 48999999999982876706201078798888999999999614687778866587899977999977987782224533
Q 537021.9.peg.4 4 QKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAA 83 (369)
Q Consensus 4 q~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~ 83 (369)
T Consensus 7 l~~~~~~l~~~~~~~rl~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~----~~Cg~C~~C~l~~~~~HPD~~~i~pe 82 (334)
T PRK07993 7 LRPDYEKLVGSYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH----KSCGHCRGCQLMQAGTHPDYYTLTPE 82 (334)
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHCCCCCCEEEECCC
T ss_conf 78999999999985981046754799998899999999999818999999----99999978999866899984775342
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf ---22334555665554456542046523775115664800167899999721221114665067543303567543332
Q 537021.9.peg.4 84 ---SHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRF 160 (369)
Q Consensus 84 ---s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~ 160 (369)
T Consensus 83 ~~~~~I~IdqIR~l~~~~~~~~~~g~~kV~iI~~Ae~mn~~AaNaLLKtLEEPp~~t~~iL~t~~~~~lLpTI~SRCq~~ 162 (334)
T PRK07993 83 KGKSSLGVDAVREVTEKLYEHARLGGAKVVWLPDAALLTDAAANALLKTLEEPPEKTWFFLACREPARLLATLRSRCRLH 162 (334)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCHHHHHCCCC
T ss_conf 23455999999999999843665699479997667775999999999861279988499986698565723887523041
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHH-H
Q ss_conf 102454001356787643101345625664456531676420011000111000000121032200013567777788-8
Q 537021.9.peg.4 161 DLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCNDKIVTSSVRLMLALADRNRIMD-L 239 (369)
Q Consensus 161 ~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~~i~~e~v~~llg~~~~~~i~~-L 239 (369)
T Consensus 163 ~~~~~~~~~~~~wL~~-----~~~~~~~~~~~al~la~Gspl~A~~l~~~-----~~~---~---------~r~~l~~~l 220 (334)
T PRK07993 163 YLAPPPEQYALTWLSR-----EVTMSQEALLAALRLSAGAPGAALALLQP-----ERW---Q---------QREALCQAL 220 (334)
T ss_pred CCCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHCCCCHHHHHHHHCC-----CHH---H---------HHHHHHHHH
T ss_conf 5899799999999987-----36898899999999849989999998256-----589---9---------999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 87630136334678876543047621357877753489999997457412234499889999999986299899999999
Q 537021.9.peg.4 240 FGYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMADTLLYSEAENARALQYSKEVSITFLSRFWQ 319 (369)
Q Consensus 240 l~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~lq 319 (369)
T Consensus 221 ~~~l~~~d~~~ll~~l~---~--~~~~~~L~wl~~ll~D~l~~~~~~~----~l~n~D~~~~i~~la~~~s~~~L~~~~~ 291 (334)
T PRK07993 221 AYSLPSGDWYSLLPALN---H--EQAPARLHWLATLLMDALKRQHGAA----QVTNVDQPPLVAQLANHLSPARLQAILG 291 (334)
T ss_pred HHHHCCCCHHHHHHHHH---H--HHHHHHHHHHHHHHHHHHHHHCCCC----CEECHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99870367999999971---6--3489999999999999999860853----0148779999999985099999999999
Q ss_pred HHHHHHHHHHC--CCCHHHHHHHHHHHHHHHC
Q ss_conf 99999998302--7888999999999995330
Q 537021.9.peg.4 320 MILKGISEIEG--FSRPMEAVEMVLIRLAHAV 349 (369)
Q Consensus 320 ~l~~a~~~Lk~--n~np~L~lE~lLlkL~~~~ 349 (369)
T Consensus 292 ~i~~~r~~L~~~~NlN~qLlLE~lll~~~~~l 323 (334)
T PRK07993 292 DVCHCREQLLSVTGVNRELLLTDLLLRIEHYL 323 (334)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99999999752689999999999999999973