HHsearch alignment for GI: peg_472 and conserved domain: PRK07993

>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=100.00  E-value=0  Score=466.87  Aligned_cols=311  Identities=22%  Similarity=0.282  Sum_probs=260.2

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf             48999999999982876706201078798888999999999614687778866587899977999977987782224533
Q 537021.9.peg.4    4 QKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAA   83 (369)
Q Consensus         4 q~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~   83 (369)
T Consensus         7 l~~~~~~l~~~~~~~rl~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~----~~Cg~C~~C~l~~~~~HPD~~~i~pe   82 (334)
T PRK07993          7 LRPDYEKLVGSYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH----KSCGHCRGCQLMQAGTHPDYYTLTPE   82 (334)
T ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHCCCCCCEEEECCC
T ss_conf             78999999999985981046754799998899999999999818999999----99999978999866899984775342


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf             ---22334555665554456542046523775115664800167899999721221114665067543303567543332
Q 537021.9.peg.4   84 ---SHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRF  160 (369)
Q Consensus        84 ---s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~  160 (369)
T Consensus        83 ~~~~~I~IdqIR~l~~~~~~~~~~g~~kV~iI~~Ae~mn~~AaNaLLKtLEEPp~~t~~iL~t~~~~~lLpTI~SRCq~~  162 (334)
T PRK07993         83 KGKSSLGVDAVREVTEKLYEHARLGGAKVVWLPDAALLTDAAANALLKTLEEPPEKTWFFLACREPARLLATLRSRCRLH  162 (334)
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCHHHHHCCCC
T ss_conf             23455999999999999843665699479997667775999999999861279988499986698565723887523041


Q ss_pred             HCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHH-H
Q ss_conf             102454001356787643101345625664456531676420011000111000000121032200013567777788-8
Q 537021.9.peg.4  161 DLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCNDKIVTSSVRLMLALADRNRIMD-L  239 (369)
Q Consensus       161 ~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~~i~~e~v~~llg~~~~~~i~~-L  239 (369)
T Consensus       163 ~~~~~~~~~~~~wL~~-----~~~~~~~~~~~al~la~Gspl~A~~l~~~-----~~~---~---------~r~~l~~~l  220 (334)
T PRK07993        163 YLAPPPEQYALTWLSR-----EVTMSQEALLAALRLSAGAPGAALALLQP-----ERW---Q---------QREALCQAL  220 (334)
T ss_pred             CCCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHCCCCHHHHHHHHCC-----CHH---H---------HHHHHHHHH
T ss_conf             5899799999999987-----36898899999999849989999998256-----589---9---------999999999


Q ss_pred             HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             87630136334678876543047621357877753489999997457412234499889999999986299899999999
Q 537021.9.peg.4  240 FGYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMADTLLYSEAENARALQYSKEVSITFLSRFWQ  319 (369)
Q Consensus       240 l~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~lq  319 (369)
T Consensus       221 ~~~l~~~d~~~ll~~l~---~--~~~~~~L~wl~~ll~D~l~~~~~~~----~l~n~D~~~~i~~la~~~s~~~L~~~~~  291 (334)
T PRK07993        221 AYSLPSGDWYSLLPALN---H--EQAPARLHWLATLLMDALKRQHGAA----QVTNVDQPPLVAQLANHLSPARLQAILG  291 (334)
T ss_pred             HHHHCCCCHHHHHHHHH---H--HHHHHHHHHHHHHHHHHHHHHCCCC----CEECHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             99870367999999971---6--3489999999999999999860853----0148779999999985099999999999


Q ss_pred             HHHHHHHHHHC--CCCHHHHHHHHHHHHHHHC
Q ss_conf             99999998302--7888999999999995330
Q 537021.9.peg.4  320 MILKGISEIEG--FSRPMEAVEMVLIRLAHAV  349 (369)
Q Consensus       320 ~l~~a~~~Lk~--n~np~L~lE~lLlkL~~~~  349 (369)
T Consensus       292 ~i~~~r~~L~~~~NlN~qLlLE~lll~~~~~l  323 (334)
T PRK07993        292 DVCHCREQLLSVTGVNRELLLTDLLLRIEHYL  323 (334)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_conf             99999999752689999999999999999973