HHsearch alignment for GI: peg_472 and conserved domain: PRK08770
>PRK08770 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00 E-value=0 Score=684.46 Aligned_cols=341 Identities=40% Similarity=0.631 Sum_probs=327.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 92848999999999982876706201078798888999999999614687778866587899977999977987782224
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVEL 80 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~ 80 (369)
T Consensus 18 ~~gq~~~~~~l~~~~~~~~~~~a~lf~g~rg~gkt~~ar~~a~~lnc~~~~~----~~pc~~c~~c~~i~~~~~~d~~e~ 93 (663)
T PRK08770 18 LVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAKSLNCETGTS----ADPCGQCPACLDIDAGRYIDLLEI 93 (663)
T ss_pred HCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC----CCCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 2285999999999997099740476227998888899999999867899999----997877877898854898865886
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 53322334555665554456542046523775115664800167899999721221114665067543303567543332
Q 537021.9.peg.4 81 DAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRF 160 (369)
Q Consensus 81 ~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~ 160 (369)
T Consensus 94 daas~~~v~~~r~~~~~~~~~p~~~~~kvy~idevhmls~~~fna~lktleepp~~v~f~~att~~~k~p~t~~src~~f 173 (663)
T PRK08770 94 DAASNTGVDDVREVIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQF 173 (663)
T ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCHHHHHHHHHC
T ss_conf 46765888999999984435887774369997004332899999998740278644289985487333748999888763
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHH
Q ss_conf 10245400135678764310134562566445653167642001100011100000012103220001356777778888
Q 537021.9.peg.4 161 DLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCNDKIVTSSVRLMLALADRNRIMDLF 240 (369)
Q Consensus 161 ~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~~i~~e~v~~llg~~~~~~i~~Ll 240 (369)
T Consensus 174 ~~~~~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~gs~rd~lsl~~q~~~~~~~~~~~~~v~~mlg~~~~~~~~~l~ 253 (663)
T PRK08770 174 NLKRLDEDQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTMLGTVDRTQVGAML 253 (663)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 43779999999999999998399769999999999747856778889999998668976899999984888878999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 76301363346788765430476213578777534899999974574122344998899999999862998999999999
Q 537021.9.peg.4 241 GYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMADTLLYSEAENARALQYSKEVSITFLSRFWQM 320 (369)
Q Consensus 241 ~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~lq~ 320 (369)
T Consensus 254 ~al~~~d~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~a~~q~~~~~~~-----~~~~~~~~~lA~~~~~e~vQL~YQI 328 (663)
T PRK08770 254 QALADGDGARLLQVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPSVAF-----VGDGIDPTPFAAQLRPEVVQLWYQM 328 (663)
T ss_pred HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99996689999999999998688999999999999999999984630124-----5435679999972899999999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 999999830278889999999999953304
Q 537021.9.peg.4 321 ILKGISEIEGFSRPMEAVEMVLIRLAHAVQ 350 (369)
Q Consensus 321 l~~a~~~Lk~n~np~L~lE~lLlkL~~~~~ 350 (369)
T Consensus 329 aL~Gr~dL~~APd~~~gfeM~LLRmlafRP 358 (663)
T PRK08770 329 ALNGRRDLYLAPSPRAGFEMAVLRMLAFRP 358 (663)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 983043255698667869999999842797