HHsearch alignment for GI: peg_472 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.

Probab=95.70  E-value=0.034  Score=36.33  Aligned_cols=28  Identities=32%  Similarity=0.464  Sum_probs=21.6

Q ss_pred             HHCCCCC--EEEHHCCCCCCCHHHHHHHHH
Q ss_conf             9828767--062010787988889999999
Q 537021.9.peg.4   15 FKSGRIA--QSYMLSGTRGIGKTTTARIIA   42 (369)
Q Consensus        15 ~~~~~~~--ha~lf~G~~G~GK~~~a~~~A   42 (369)
T Consensus        16 iL~GGlp~g~~~LV~G~pGsGKTtla~QfL   45 (501)
T PRK09302         16 ITNGGLPKGRPTLVSGTAGTGKTLFALQFL   45 (501)
T ss_pred             HHCCCCCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             854898899779998389999999999999