HHsearch alignment for GI: peg_472 and conserved domain: PRK10646

Probab=92.97  E-value=0.27  Score=29.67  Aligned_cols=101  Identities=18%  Similarity=0.123  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHCC-CCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             9999999999828-767062010787988889999999996146877788665878999779999779877822245332
Q 537021.9.peg.4    6 PMIKTLTNAFKSG-RIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAAS   84 (369)
Q Consensus         6 ~~~~~l~~~~~~~-~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s   84 (369)
T Consensus        12 ~~T~~lg~~la~~l~~g~vi~L~G~LGaGKTtf~r~i~~~lg~~~-~V~SPTf~lv~~Y~~~~--~~~~H~DlYRl~~~-   87 (153)
T PRK10646         12 QATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQG-NVKSPTYTLVEPYTLDN--LMVYHFDLYRLADP-   87 (153)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC-CCCCCCEEEEEEECCCC--CEEEEEEEECCCCH-
T ss_conf             999999999997689997999988887899999999999849978-62699764799732899--33899985346998-


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHC
Q ss_conf             2334555665554456542046523775115664
Q 537021.9.peg.4   85 HTSIDDVREIIDQIYYKPISARFRVYIMDEVQML  118 (369)
Q Consensus        85 ~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m  118 (369)
T Consensus        88 ----~e~~~lg----~~e~~~~~~i~lIEWpe~~  113 (153)
T PRK10646         88 ----EELEFMG----IRDYFANDAICLVEWPQQG  113 (153)
T ss_pred             ----HHHHHCC----CHHHHCCCCEEEEECCCCC
T ss_conf             ----8998778----7888579969999897651