HHsearch alignment for GI: peg_472 and conserved domain: PRK10787

>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=99.05  E-value=1.6e-09  Score=90.36  Aligned_cols=180  Identities=20%  Similarity=0.351  Sum_probs=110.0

Q ss_pred             CHHHHHHHHHHHH-----HCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf             8489999999999-----82876706201078798888999999999614687778866587899977999977987782
Q 537021.9.peg.4    3 GQKPMIKTLTNAF-----KSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDV   77 (369)
Q Consensus         3 Gq~~~~~~l~~~~-----~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~   77 (369)
T Consensus       326 GL~~vKeRile~lAv~~~~~~~kg~IlclvGpPGvGKTSl~~sIA~al~r~f~r-----------------islGGv~De  388 (784)
T PRK10787        326 GLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVR-----------------MALGGVRDE  388 (784)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE-----------------EECCCCCCH
T ss_conf             657799999999999986246778779964699877246999999985898699-----------------806887888


Q ss_pred             CCCCCCCCCCHHHH-HHHHHHHHHHHHCCCCCEEEEECHHHCCC----CHHHHHHHHHHHCCC----------------C
Q ss_conf             22453322334555-66555445654204652377511566480----016789999972122----------------1
Q 537021.9.peg.4   78 VELDAASHTSIDDV-REIIDQIYYKPISARFRVYIMDEVQMLST----AAFNGLLKTLEEPPP----------------H  136 (369)
Q Consensus        78 ~e~~~~s~~~id~i-r~l~~~~~~~p~~~~~kv~iid~a~~m~~----~a~NaLLK~lEEPp~----------------~  136 (369)
T Consensus       389 aeirGHrrTYvgampGrii~~l~~--a~~~nPv~llDEiDK~~~~~~Gdp~salLEvLD-peQN~~F~Dhyl~~~~DlS~  465 (784)
T PRK10787        389 AEIRGHRRTYIGSMPGKLIQKMAK--VGVKNPLFLLDEIDKMSSDMRGDPASALLEVLD-PEQNVAFSDHYLEVDYDLSD  465 (784)
T ss_pred             HHHCCCCCCCCCCCCHHHHHHHHH--HCCCCCEEEEHHHHHHCCCCCCCHHHHHHHHCC-HHHCCCCCCCEEECCCCHHH
T ss_conf             882564334344368389999997--489885665003555224558998899998459-76556400032204645222


Q ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHH----HHHH-HHH-----HHCCCCCCHHHHHHHHHC--CCCCCCH
Q ss_conf             11466506754330356754333210245400135----6787-643-----101345625664456531--6764200
Q 537021.9.peg.4  137 VKFIFATTEIRKIPITVLSRCQRFDLHRISIGDLI----ELFT-KIL-----QEESIEFDPEAVAMIARA--SDGSARD  203 (369)
Q Consensus       137 ~~fil~t~~~~~ll~TI~SRcq~~~f~~l~~~~i~----~~L~-~i~-----~~E~i~~d~~~l~~ia~~--s~GslR~  203 (369)
T Consensus       466 v~Fi~TaN~~~-ip~pLlDRmE~i~~~gYt~~eK~~Ia~~~l~p~~~~~~gl~~~~~~~~~~~~~~ii~~ytrEaGvR~  543 (784)
T PRK10787        466 VMFVATSNSMN-IPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS  543 (784)
T ss_pred             EEEEEECCCCC-CCHHHHHHEEEEEECCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf             58997327677-8767763121554116767889999997453999998289965674399999998753365444251