HHsearch alignment for GI: peg_472 and conserved domain: PRK11034

>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional.
Probab=98.76  E-value=1.9e-07  Score=75.08  Aligned_cols=128  Identities=23%  Similarity=0.369  Sum_probs=85.1

Q ss_pred             CCCHHHHHHHHHHHHHCCC--------CCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH--
Q ss_conf             9284899999999998287--------670620107879888899999999961468777886658789997799997--
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFKSGR--------IAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAII--   70 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~~~~--------~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~--   70 (369)
T Consensus       460 viGQ~~Ai~~v~~ai~~~raGL~~~~rPigsFlf~GPTGVGKTElak~LA~~L~--~~---lir~D-MSEy~e~hsvsrL  533 (758)
T PRK11034        460 VFGQDKAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG--IE---LLRFD-MSEYMERHTVSRL  533 (758)
T ss_pred             HHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH--HH---HHCCC-HHHHCCHHHHHHH
T ss_conf             745499999999999998638889999705899978998777999999999986--67---72142-6653120147774


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCC-----------CCCCE
Q ss_conf             7987782224533223345556655544565420465237751156648001678999997212-----------21114
Q 537021.9.peg.4   71 RGNHVDVVELDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPP-----------PHVKF  139 (369)
Q Consensus        71 ~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp-----------~~~~f  139 (369)
T Consensus       534 iGaPPGYV--------Gy~eGG~Lte~Vr~~Pys----VvL~DEIEKAhpdV~nilLQvlD~G~LtD~~Gr~vdF~NtiI  601 (758)
T PRK11034        534 IGAPPGYV--------GFDQGGLLTDAVIKHPHA----VLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVL  601 (758)
T ss_pred             CCCCCCCC--------CCCCCCCCCHHHHHCCCE----EEEEHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEECEEEEE
T ss_conf             48998666--------767777012878739877----997336756398999988732377830179999884400199


Q ss_pred             EEEECCCC
Q ss_conf             66506754
Q 537021.9.peg.4  140 IFATTEIR  147 (369)
Q Consensus       140 il~t~~~~  147 (369)
T Consensus       602 ImTS-N~G  608 (758)
T PRK11034        602 VMTT-NAG  608 (758)
T ss_pred             EEEC-CCC
T ss_conf             9825-617