HHsearch alignment for GI: peg_472 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=94.44 E-value=0.073 Score=33.85 Aligned_cols=109 Identities=16% Similarity=0.275 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHCCCCCEE-EHHCCCCCCCHHHHHHHHHHHHC--------CCCCCCCCCCCCCCCCCHHH----HHHHC
Q ss_conf 8999999999982876706-20107879888899999999961--------46877788665878999779----99977
Q 537021.9.peg.4 5 KPMIKTLTNAFKSGRIAQS-YMLSGTRGIGKTTTARIIARSLN--------YKTAHIDVPTVEFEGFGEHC----QAIIR 71 (369)
Q Consensus 5 ~~~~~~l~~~~~~~~~~ha-~lf~G~~G~GK~~~a~~~A~~l~--------c~~~~~~~~~~~~c~~c~~c----~~i~~ 71 (369)
T Consensus 231 ~~~l~~~~~li~r---pHGIiLVTGPTGSGKtTTLYaaL~~LN~~~~NIlTvEDPVEY~--i~GIgQ~Qvn~kIglTFA~ 305 (495)
T TIGR02533 231 PELLSSLERLIKR---PHGIILVTGPTGSGKTTTLYAALSRLNTPERNILTVEDPVEYQ--IEGIGQIQVNPKIGLTFAA 305 (495)
T ss_pred HHHHHHHHHHHHC---CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCEEEE--ECCCCEEEECCCCCHHHHH
T ss_conf 8899999999718---8961884177898525889999986358997156865782476--2487636514654303888
Q ss_pred C------CCCCCCCCCCCCCCCHHHHHHHH--HHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHH
Q ss_conf 9------87782224533223345556655--544565420465237751156648001678999997
Q 537021.9.peg.4 72 G------NHVDVVELDAASHTSIDDVREII--DQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLE 131 (369)
Q Consensus 72 ~------~~~d~~e~~~~s~~~id~ir~l~--~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lE 131 (369)
T Consensus 306 GLRaILRQDPDii--------MvGEIRD~ETA~IAiQASLTGH---LVLSTLH--TNDAAgAvtRL~D 360 (495)
T TIGR02533 306 GLRAILRQDPDII--------MVGEIRDLETAQIAIQASLTGH---LVLSTLH--TNDAAGAVTRLID 360 (495)
T ss_pred HHHHHHCCCCCEE--------EEECCCCHHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHHH
T ss_conf 8788642799889--------9823160689999998764325---7655655--4015446655532