HHsearch alignment for GI: peg_472 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=97.63 E-value=0.00011 Score=54.65 Aligned_cols=114 Identities=27% Similarity=0.332 Sum_probs=60.3
Q ss_pred HHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCHHHHHHHCCCCCC-CCCCC
Q ss_conf 9999999998287670620107879888899999999961----468777886658789997799997798778-22245
Q 537021.9.peg.4 7 MIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLN----YKTAHIDVPTVEFEGFGEHCQAIIRGNHVD-VVELD 81 (369)
Q Consensus 7 ~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~----c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d-~~e~~ 81 (369)
T Consensus 10 v~~R~l~yL~~G~PvH---l~GPaG~GKT~LA~hvA~~r~RPV~l~~Gd~eL~~~DLvG~~~g---~~~~kv~Dqfih-- 81 (265)
T TIGR02640 10 VTSRALRYLKSGYPVH---LRGPAGTGKTTLAMHVARKRDRPVVLINGDAELTTSDLVGSYAG---YTRKKVVDQFIH-- 81 (265)
T ss_pred HHHHHHHHHCCCCCEE---EECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC---CEEEEEEECCEE--
T ss_conf 9998766322788667---44788855689999999736896899865823265442315467---522223201211--
Q ss_pred CCCCCC-HHHHHH-HHH-HHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHH
Q ss_conf 332233-455566-555-445654204652377511566480016789999972
Q 537021.9.peg.4 82 AASHTS-IDDVRE-IID-QIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEE 132 (369)
Q Consensus 82 ~~s~~~-id~ir~-l~~-~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEE 132 (369)
T Consensus 82 --nV~K~~d~~~~~W~D~rLt~A-v~eG~-TLVYdEF~RskP~~nNVLLSvlEE 131 (265)
T TIGR02640 82 --NVVKLEDIVRQNWVDNRLTLA-VREGF-TLVYDEFTRSKPETNNVLLSVLEE 131 (265)
T ss_pred --EEECCCCCCCCCCCCCHHHHH-HHCCC-EEEECCCCCCCCHHHHHHHHHHHH
T ss_conf --134251220026678357899-75697-276647578862045656755552