HHsearch alignment for GI: peg_472 and conserved domain: TIGR03346

>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins.
Probab=98.95  E-value=2e-08  Score=82.27  Aligned_cols=133  Identities=21%  Similarity=0.342  Sum_probs=87.4

Q ss_pred             CCCHHHHHHHHHHHHHCCCC-------C-EEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH--
Q ss_conf             92848999999999982876-------7-0620107879888899999999961468777886658789997799997--
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFKSGRI-------A-QSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAII--   70 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~~~~~-------~-ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~--   70 (369)
T Consensus       567 ViGQd~AI~~I~~aI~~sraGL~dp~rP~GsFlf~GptGvGKTELAKaLAe~Lfg~~~~LI--riD-MSEy~E~hsvsrL  643 (852)
T TIGR03346       567 VVGQDEAVEAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELAKALAEFLFDDEDAMV--RID-MSEYMEKHSVARL  643 (852)
T ss_pred             HCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEE--EEC-HHHHCCHHHHHHH
T ss_conf             7170999999999999997188889997458998678877689999999999855852069--843-0443012247785


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCC-----------CCCCE
Q ss_conf             7987782224533223345556655544565420465237751156648001678999997212-----------21114
Q 537021.9.peg.4   71 RGNHVDVVELDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPP-----------PHVKF  139 (369)
Q Consensus        71 ~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp-----------~~~~f  139 (369)
T Consensus       644 iGaPPGYV--------Gy~egG~Lte~vr~~Pys----VvL~DEIEKAh~~V~~~lLQilD~G~ltD~~Gr~vdF~Ntii  711 (852)
T TIGR03346       644 IGAPPGYV--------GYEEGGQLTEAVRRKPYS----VVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVI  711 (852)
T ss_pred             CCCCCCCC--------CCCCCCEECHHHHHCCCE----EEEECCHHHHCHHHHHHHHHHHCCCEEECCCCCEEEEEEEEE
T ss_conf             58999767--------768787423989819887----998530543076899999988236743079998885355689


Q ss_pred             EEEECCCCC
Q ss_conf             665067543
Q 537021.9.peg.4  140 IFATTEIRK  148 (369)
Q Consensus       140 il~t~~~~~  148 (369)
T Consensus       712 imTSN~Ga~  720 (852)
T TIGR03346       712 IMTSNLGSQ  720 (852)
T ss_pred             EEECCCCHH
T ss_conf             861540659