HHsearch alignment for GI: peg_472 and conserved domain: cd00267
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.37 E-value=0.045 Score=35.43 Aligned_cols=114 Identities=23% Similarity=0.221 Sum_probs=55.3
Q ss_pred EEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH---HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 0620107879888899999999961468777886658789997---7999977987782224533223345556655544
Q 537021.9.peg.4 22 QSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGE---HCQAIIRGNHVDVVELDAASHTSIDDVREIIDQI 98 (369)
Q Consensus 22 ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~---~c~~i~~~~~~d~~e~~~~s~~~id~ir~l~~~~ 98 (369)
T Consensus 26 e~~~i~G~nGaGKSTLl~~l~gl~~~~~G~i-----~~~g~~~~~~~~~~~~~~-i~~v~QLSgGqkqrv~iA~------ 93 (157)
T cd00267 26 EIVALVGPNGSGKSTLLRAIAGLLKPTSGEI-----LIDGKDIAKLPLEELRRR-IGYVPQLSGGQRQRVALAR------ 93 (157)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCEE-----EECCEECCCCCHHHHHHC-CCCCCCCCHHHHHHHHHHH------
T ss_conf 7999987889998999999958847996289-----999999997999999940-6087668869999999999------
Q ss_pred HHHHHCCCCCEEEEECHH-HCCCCHHHHHHHHHHHCC-CCCCEEEEECCCCCCC
Q ss_conf 565420465237751156-648001678999997212-2111466506754330
Q 537021.9.peg.4 99 YYKPISARFRVYIMDEVQ-MLSTAAFNGLLKTLEEPP-PHVKFIFATTEIRKIP 150 (369)
Q Consensus 99 ~~~p~~~~~kv~iid~a~-~m~~~a~NaLLK~lEEPp-~~~~fil~t~~~~~ll 150 (369)
T Consensus 94 ---al~~~p~ililDEPtsgLD~~~~~~l~~~i~~l~~~g~tii~vtH~~~~~~ 144 (157)
T cd00267 94 ---ALLLNPDLLLLDEPTSGLDPASRERLLELLRELAEEGRTVIIVTHDPELAE 144 (157)
T ss_pred ---HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH
T ss_conf ---997099999996987668999999999999999968999999908999999