HHsearch alignment for GI: peg_472 and conserved domain: cd00984

>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=95.60  E-value=0.048  Score=35.22  Aligned_cols=26  Identities=23%  Similarity=0.300  Sum_probs=21.7

Q ss_pred             CCEEEHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             67062010787988889999999996
Q 537021.9.peg.4   20 IAQSYMLSGTRGIGKTTTARIIARSL   45 (369)
Q Consensus        20 ~~ha~lf~G~~G~GK~~~a~~~A~~l   45 (369)
T Consensus        12 ~G~L~vi~a~~g~GKS~~~~~la~~~   37 (242)
T cd00984          12 PGDLIIIAARPSMGKTAFALNIAENI   37 (242)
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf             98189999689999999999999999