HHsearch alignment for GI: peg_472 and conserved domain: cd01122
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=94.88 E-value=0.25 Score=29.90 Aligned_cols=37 Identities=32% Similarity=0.333 Sum_probs=26.7
Q ss_pred HHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999828767062010787988889999999996
Q 537021.9.peg.4 9 KTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSL 45 (369)
Q Consensus 9 ~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l 45 (369)
T Consensus 18 ~~LD~~~~Gl~~GeL~viaarpg~GKT~f~~~~a~~~ 54 (271)
T cd01122 18 PVLNKLTKGLRKGELIILTAGTGVGKTTFLREYALDL 54 (271)
T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 6688873799998089999689986999999999999