HHsearch alignment for GI: peg_472 and conserved domain: cd01124
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs. A related protein is found in archaea.
Probab=93.86 E-value=0.032 Score=36.48 Aligned_cols=20 Identities=45% Similarity=0.494 Sum_probs=17.3
Q ss_pred HHCCCCCCCHHHHHHHHHHH
Q ss_conf 01078798888999999999
Q 537021.9.peg.4 25 MLSGTRGIGKTTTARIIARS 44 (369)
Q Consensus 25 lf~G~~G~GK~~~a~~~A~~ 44 (369)
T Consensus 3 Li~G~pGsGKT~~a~qfl~~ 22 (187)
T cd01124 3 LLSGGPGTGKTTFALQFLYA 22 (187)
T ss_pred EEEECCCCCHHHHHHHHHHH
T ss_conf 58768999999999999999