HHsearch alignment for GI: peg_472 and conserved domain: cd01393

>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=95.65  E-value=0.051  Score=35.02  Aligned_cols=27  Identities=30%  Similarity=0.305  Sum_probs=20.7

Q ss_pred             CCCC--EEEHHCCCCCCCHHHHHHHHHHH
Q ss_conf             8767--06201078798888999999999
Q 537021.9.peg.4   18 GRIA--QSYMLSGTRGIGKTTTARIIARS   44 (369)
Q Consensus        18 ~~~~--ha~lf~G~~G~GK~~~a~~~A~~   44 (369)
T Consensus        14 GGip~G~ItEi~G~~gsGKT~l~lqla~~   42 (226)
T cd01393          14 GGIPTGRITEIFGEFGSGKTQLCLQLAVE   42 (226)
T ss_pred             CCCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             99888839999999999899999999999