HHsearch alignment for GI: peg_472 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=94.03 E-value=0.066 Score=34.18 Aligned_cols=102 Identities=22% Similarity=0.241 Sum_probs=52.3
Q ss_pred EEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 06201078798888999999999614687778866587899977999977987782224533223345556655544565
Q 537021.9.peg.4 22 QSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAASHTSIDDVREIIDQIYYK 101 (369)
Q Consensus 22 ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~ 101 (369)
T Consensus 27 e~~~l~G~NGsGKTTl~~~l~G~~~----~~-------~G~i~----~~~~~--~i~y~~QLS--gGqkqr~~l----a~ 83 (144)
T cd03221 27 DRIGLVGRNGAGKSTLLKLIAGELE----PD-------EGIVT----WGSTV--KIGYFEQLS--GGEKMRLAL----AK 83 (144)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCC----CC-------CEEEE----ECCCC--EEEEEHHCC--HHHHHHHHH----HH
T ss_conf 9999998999849999999848988----98-------50999----99960--899870079--999999999----99
Q ss_pred HHCCCCCEEEEECHH-HCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 420465237751156-64800167899999721221114665067543
Q 537021.9.peg.4 102 PISARFRVYIMDEVQ-MLSTAAFNGLLKTLEEPPPHVKFIFATTEIRK 148 (369)
Q Consensus 102 p~~~~~kv~iid~a~-~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ 148 (369)
T Consensus 84 al~~~p~iliLDEPt~~LD~~~~~~i~~~l~~~~-~-tii~vsHd~~~ 129 (144)
T cd03221 84 LLLENPNLLLLDEPTNHLDLESIEALEEALKEYP-G-TVILVSHDRYF 129 (144)
T ss_pred HHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC-C-EEEEEECCHHH
T ss_conf 9725998999957755589999999999999709-9-99999679899