HHsearch alignment for GI: peg_472 and conserved domain: cd03227
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=94.74 E-value=0.093 Score=33.09 Aligned_cols=110 Identities=17% Similarity=0.131 Sum_probs=51.7
Q ss_pred EEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC-----CCCCCCCCCHHHHHHHHHH
Q ss_conf 62010787988889999999996146877788665878999779999779877822-----2453322334555665554
Q 537021.9.peg.4 23 SYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVV-----ELDAASHTSIDDVREIIDQ 97 (369)
Q Consensus 23 a~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~-----e~~~~s~~~id~ir~l~~~ 97 (369)
T Consensus 23 ~~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~lSg-g~~~~~~l~~~ 91 (162)
T cd03227 23 LTIITGPNGSGKSTILDAIGLALGGAQSATRRR----------SGVKAGCIVAAVSAELIFTRLQLSG-GEKELSALALI 91 (162)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC----------HHHHCCCCCHHHEEEEEECCCCCCC-CHHHHHHHHHH
T ss_conf 899989987757999999999999863267752----------5554277640230576641200054-29999999999
Q ss_pred HHHHHHCCCCCEEEEECHHH-CCC----CHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 45654204652377511566-480----016789999972122111466506754
Q 537021.9.peg.4 98 IYYKPISARFRVYIMDEVQM-LST----AAFNGLLKTLEEPPPHVKFIFATTEIR 147 (369)
Q Consensus 98 ~~~~p~~~~~kv~iid~a~~-m~~----~a~NaLLK~lEEPp~~~~fil~t~~~~ 147 (369)
T Consensus 92 l~~~-~~~~~~lillDE~~~Gtd~~~~~~l~~~i~~~~~~---~~~~i~tTH~~e 142 (162)
T cd03227 92 LALA-SLKPRPLYILDEIDRGLDPRDGQALAEAILEHLVK---GAQVIVITHLPE 142 (162)
T ss_pred HHHC-CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHC---CCEEEEECCHHH
T ss_conf 9854-24898489963655799988999999999999976---998999797399