HHsearch alignment for GI: peg_472 and conserved domain: cd03235
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=94.18 E-value=0.075 Score=33.77 Aligned_cols=23 Identities=30% Similarity=0.407 Sum_probs=18.2
Q ss_pred EEHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 62010787988889999999996
Q 537021.9.peg.4 23 SYMLSGTRGIGKTTTARIIARSL 45 (369)
Q Consensus 23 a~lf~G~~G~GK~~~a~~~A~~l 45 (369)
T Consensus 27 ~~~liGpNGaGKSTllk~i~Gl~ 49 (213)
T cd03235 27 FLAIVGPNGAGKSTLLKAILGLL 49 (213)
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999986999999997687