HHsearch alignment for GI: peg_472 and conserved domain: pfam03796
>pfam03796 DnaB_C DnaB-like helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=94.97 E-value=0.23 Score=30.25 Aligned_cols=27 Identities=26% Similarity=0.317 Sum_probs=21.7
Q ss_pred CCCEEEHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 767062010787988889999999996
Q 537021.9.peg.4 19 RIAQSYMLSGTRGIGKTTTARIIARSL 45 (369)
Q Consensus 19 ~~~ha~lf~G~~G~GK~~~a~~~A~~l 45 (369)
T Consensus 17 ~~G~l~vi~g~pg~GKS~~~~~~a~~~ 43 (186)
T pfam03796 17 QKGDLIIIAARPSMGKTAFALNIARNA 43 (186)
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 888179999679998799999999999