HHsearch alignment for GI: peg_472 and conserved domain: pfam05872
>pfam05872 DUF853 Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. One member from Brucella melitensis is thought to be an ATPase.
Probab=94.35 E-value=0.2 Score=30.56 Aligned_cols=91 Identities=24% Similarity=0.250 Sum_probs=61.5
Q ss_pred CCEEEEECHHHCCCCHHHHHHHHHHH-----CCCCCCEEEEECCCCCCCHHHHH----HHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 52377511566480016789999972-----12211146650675433035675----4333210245400135678764
Q 537021.9.peg.4 107 FRVYIMDEVQMLSTAAFNGLLKTLEE-----PPPHVKFIFATTEIRKIPITVLS----RCQRFDLHRISIGDLIELFTKI 177 (369)
Q Consensus 107 ~kv~iid~a~~m~~~a~NaLLK~lEE-----Pp~~~~fil~t~~~~~ll~TI~S----Rcq~~~f~~l~~~~i~~~L~~i 177 (369)
T Consensus 258 KLVFFFDEAHLLF~dApkall~kIEqvVRLIRSKGVGVyFvTQnP~DiPd~VL~QLGnRVQH-ALRAfTP~DqKA-vk~a 335 (504)
T pfam05872 258 KLVFFFDEAHLLFNDAPKVLLEKVEQVVRLIRSKGVGVYFVTQNPLDLPDTVLAQLGNRVQH-ALRAFTPRDQKA-VKAA 335 (504)
T ss_pred EEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH-HHHCCCHHHHHH-HHHH
T ss_conf 38999401666524785999999999998753067359997278764708899988778899-986388546999-9999
Q ss_pred HHHCCCCCCHHHHHHHHHCCCC
Q ss_conf 3101345625664456531676
Q 537021.9.peg.4 178 LQEESIEFDPEAVAMIARASDG 199 (369)
Q Consensus 178 ~~~E~i~~d~~~l~~ia~~s~G 199 (369)
T Consensus 336 a~tfr~np~~d~~~~it~LgvG 357 (504)
T pfam05872 336 ADTFRPNPDFDTEEAITELGTG 357 (504)
T ss_pred HHHCCCCCCCCHHHHHHHCCCC
T ss_conf 9857999766899998762765