HHsearch alignment for GI: peg_472 and conserved domain: pfam05872

>pfam05872 DUF853 Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. One member from Brucella melitensis is thought to be an ATPase.
Probab=94.35  E-value=0.2  Score=30.56  Aligned_cols=91  Identities=24%  Similarity=0.250  Sum_probs=61.5

Q ss_pred             CCEEEEECHHHCCCCHHHHHHHHHHH-----CCCCCCEEEEECCCCCCCHHHHH----HHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             52377511566480016789999972-----12211146650675433035675----4333210245400135678764
Q 537021.9.peg.4  107 FRVYIMDEVQMLSTAAFNGLLKTLEE-----PPPHVKFIFATTEIRKIPITVLS----RCQRFDLHRISIGDLIELFTKI  177 (369)
Q Consensus       107 ~kv~iid~a~~m~~~a~NaLLK~lEE-----Pp~~~~fil~t~~~~~ll~TI~S----Rcq~~~f~~l~~~~i~~~L~~i  177 (369)
T Consensus       258 KLVFFFDEAHLLF~dApkall~kIEqvVRLIRSKGVGVyFvTQnP~DiPd~VL~QLGnRVQH-ALRAfTP~DqKA-vk~a  335 (504)
T pfam05872       258 KLVFFFDEAHLLFNDAPKVLLEKVEQVVRLIRSKGVGVYFVTQNPLDLPDTVLAQLGNRVQH-ALRAFTPRDQKA-VKAA  335 (504)
T ss_pred             EEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH-HHHCCCHHHHHH-HHHH
T ss_conf             38999401666524785999999999998753067359997278764708899988778899-986388546999-9999


Q ss_pred             HHHCCCCCCHHHHHHHHHCCCC
Q ss_conf             3101345625664456531676
Q 537021.9.peg.4  178 LQEESIEFDPEAVAMIARASDG  199 (369)
Q Consensus       178 ~~~E~i~~d~~~l~~ia~~s~G  199 (369)
T Consensus       336 a~tfr~np~~d~~~~it~LgvG  357 (504)
T pfam05872       336 ADTFRPNPDFDTEEAITELGTG  357 (504)
T ss_pred             HHHCCCCCCCCHHHHHHHCCCC
T ss_conf             9857999766899998762765