HHsearch alignment for GI: peg_472 and conserved domain: pfam06144
>pfam06144 DNA_pol3_delta DNA polymerase III, delta subunit. DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction. The delta subunit is also known as HolA.
Probab=98.69 E-value=4.6e-08 Score=79.60 Aligned_cols=161 Identities=14% Similarity=0.233 Sum_probs=119.3
Q ss_pred EHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 20107879888899999999961468777886658789997799997798778222453322334555665554456542
Q 537021.9.peg.4 24 YMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAASHTSIDDVREIIDQIYYKPI 103 (369)
Q Consensus 24 ~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~p~ 103 (369)
T Consensus 1 Yll~G~e~~l~~~~~~~i~~~~~~~~~-~---------------------~~n~~~~d~~~-~---~~~~i~~~~~t~sl 54 (172)
T pfam06144 1 YLLYGEDPFLLEETKDQILKAALDQGF-E---------------------DFNYIYFDLEE-D---WADDVLEECETLPF 54 (172)
T ss_pred CEEECCCHHHHHHHHHHHHHHHHCCCC-C---------------------EEEEEEECCCC-C---CHHHHHHHHCCCCC
T ss_conf 979728599999999999999737997-3---------------------03689862776-6---69999999728998
Q ss_pred CCCCCEEEEECHHH----CCCCHHHHHHHHHHHCCCCCCEEEEECC-C---CCCCHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 04652377511566----4800167899999721221114665067-5---43303567543332102454001356787
Q 537021.9.peg.4 104 SARFRVYIMDEVQM----LSTAAFNGLLKTLEEPPPHVKFIFATTE-I---RKIPITVLSRCQRFDLHRISIGDLIELFT 175 (369)
Q Consensus 104 ~~~~kv~iid~a~~----m~~~a~NaLLK~lEEPp~~~~fil~t~~-~---~~ll~TI~SRcq~~~f~~l~~~~i~~~L~ 175 (369)
T Consensus 55 F~~~rlvii~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~lv~~~~~~~~~~~k~~k~l~k~~~~i~~~~~~~~~l~~wi~ 134 (172)
T pfam06144 55 FSDKRIVILNNPNLKESKLNEKLLKRLEEYLSNPPEDTLLIIEAPGKLDERKKLTKLLKKKATVVECFTLKEEELIQWIQ 134 (172)
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH
T ss_conf 88976999977642445553999999999983699872899983674136788899998376699934898789999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCC
Q ss_conf 64310134562566445653167642001100011
Q 537021.9.peg.4 176 KILQEESIEFDPEAVAMIARASDGSARDGLSLLDQ 210 (369)
Q Consensus 176 ~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq 210 (369)
T Consensus 135 ~~~~~~g~~i~~~a~~~L~~~~g~nl~~l~~EieK 169 (172)
T pfam06144 135 KRAKELGLKIEKDALQLLAEKVENNLLAIAQELEK 169 (172)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH
T ss_conf 99998499989999999999978489999999997