HHsearch alignment for GI: peg_472 and conserved domain: pfam06745
>pfam06745 KaiC KaiC. This family represents a conserved region within bacterial and archaeal proteins, most of which are hypothetical. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Probab=95.53 E-value=0.068 Score=34.11 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=18.9
Q ss_pred EEEHHCCCCCCCHHHHHHHHHH
Q ss_conf 0620107879888899999999
Q 537021.9.peg.4 22 QSYMLSGTRGIGKTTTARIIAR 43 (369)
Q Consensus 22 ha~lf~G~~G~GK~~~a~~~A~ 43 (369)
T Consensus 20 s~~LI~G~pGsGKT~la~qfl~ 41 (231)
T pfam06745 20 RVVLITGGPGTGKTIFGLQFLY 41 (231)
T ss_pred EEEEEECCCCCCHHHHHHHHHH
T ss_conf 6999985897259999999999