HHsearch alignment for GI: peg_472 and conserved domain: pfam07728

>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=98.44  E-value=5e-07  Score=71.95  Aligned_cols=88  Identities=19%  Similarity=0.265  Sum_probs=48.7

Q ss_pred             EHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC---CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             2010787988889999999996146877788665878999779999779877822---2453322334555665554456
Q 537021.9.peg.4   24 YMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVV---ELDAASHTSIDDVREIIDQIYY  100 (369)
Q Consensus        24 ~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~---e~~~~s~~~id~ir~l~~~~~~  100 (369)
T Consensus         2 vll~Gp~G~GKT~la~~la~~l~-~~~~~~----i~~~~~~~--------~~dl~G~~~~~~-~--~~----~~~~g~l~   61 (139)
T pfam07728         2 VLLVGPPGTGKSELAERLAAALS-NRPVFY----VQLTRDTT--------EEDLKGRRNIAN-G--TT----SWVDGPLV   61 (139)
T ss_pred             EEEECCCCCHHHHHHHHHHHHCC-CCCCHH----HCCCCCCC--------HHHCCCCEECCC-C--CE----EEECCHHH
T ss_conf             89998997569999999999807-983111----21465565--------222057342379-9--35----78155141


Q ss_pred             HHHCCCCCEEEEECHHHCCCCHHHHHHHHHHH
Q ss_conf             54204652377511566480016789999972
Q 537021.9.peg.4  101 KPISARFRVYIMDEVQMLSTAAFNGLLKTLEE  132 (369)
Q Consensus       101 ~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEE  132 (369)
T Consensus        62 ~a~~-~g~vl~lDEin~a~~~v~~~L~~~le~   92 (139)
T pfam07728        62 RAAR-EGEIAVLDEINRANPDVLNSLLSLLDE   92 (139)
T ss_pred             CCCC-CCCEEEECCHHHCCHHHHHHHHHHHCC
T ss_conf             0101-286899634344899999999999748