HHsearch alignment for GI: peg_473 and conserved domain: PRK05563

Probab=97.61  E-value=0.0012  Score=42.19  Aligned_cols=95  Identities=13%  Similarity=0.174  Sum_probs=71.7

Q ss_pred             CCHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCC--------HHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             448999999986182667999972640045049808999778999--------779999999999860992599996897
Q 537021.9.peg.4   62 NYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIP--------EDFIENLATKLKNWTGEDWEIRFSLGR  133 (165)
Q Consensus        62 nsf~~lveL~~~~rei~Lk~~Le~~VrLVsFe~GrIei~~~~~a~--------~~l~~~Ls~~L~~wTG~rW~VslS~g~  133 (165)
T Consensus       437 ~~W~~ILe~lk~~r~~~l~alL-~~~~pv~~~~~~l~I~f~~~~~f~~~~l~~~e~~~~ie~i~~e~~g~~~~i~~v~~~  515 (541)
T PRK05563        437 KVWKDILEAFKARRKMVLYAAL-VTGKLVKCKKGVITINYKKEYAFNKKRLEKPENKKVVEEIFSEVLKEKVRVKYVVEE  515 (541)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHH-HCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf             8999999998852542099998-559579987998999989831778998612778999999999996998169999845


Q ss_pred             CHHHHHCCHHHHHHHHHCCCCEEEEEE
Q ss_conf             413665396999999867997789877
Q 537021.9.peg.4  134 CCEYFEIDSDIKAVRTIFPTAQVVCIR  160 (165)
Q Consensus       134 ~~e~~~~dp~V~avl~~FPgAeI~~VR  160 (165)
T Consensus       516 ~~~-~e~~~-~~~~k~~f-g~~~~ei~  539 (541)
T PRK05563        516 EIK-EEKDP-EEILKNTF-GEEILEII  539 (541)
T ss_pred             CCC-CCCCH-HHHHHHHC-CCCCEEEC
T ss_conf             654-44689-99999865-86435634