HHsearch alignment for GI: peg_473 and conserved domain: PRK08770
>PRK08770 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.82 E-value=0.00024 Score=46.29 Aligned_cols=99 Identities=22% Similarity=0.186 Sum_probs=77.0
Q ss_pred HHHHHHHHHCCHHHHHHHHHHCCCCEEECCCEEEEEECCC----CCHHHHHHHHHHHHHHCCCCEEEEEECCCCH-----
Q ss_conf 9999999861826679999726400450498089997789----9977999999999986099259999689741-----
Q 537021.9.peg.4 65 KQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKE----IPEDFIENLATKLKNWTGEDWEIRFSLGRCC----- 135 (165)
Q Consensus 65 ~~lveL~~~~rei~Lk~~Le~~VrLVsFe~GrIei~~~~~----a~~~l~~~Ls~~L~~wTG~rW~VslS~g~~~----- 135 (165)
T Consensus 539 ~~W~~lV~qL~L~GlarqLAlNs~Lvs~~d~~L~L~L~~~~~hL~ne~~~erL~qALse~lG~~V~L~Ievg~~~~eTPa 618 (663)
T PRK08770 539 EQWLELVTRSGLNGPSRQLAANAAFIGHRDGVLRLALAPGFEYLNSERSIANLAQALAPVLGNAPRIVIETGSADVETLH 618 (663)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHEEECCEEEEEECHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH
T ss_conf 26999998669817999999834454236898999978887875699999999999999978997999987998886999
Q ss_pred ---------------HHHHCCHHHHHHHHHCCCCEEE--EEEECCC
Q ss_conf ---------------3665396999999867997789--8774588
Q 537021.9.peg.4 136 ---------------EYFEIDSDIKAVRTIFPTAQVV--CIRTIPN 164 (165)
Q Consensus 136 ---------------e~~~~dp~V~avl~~FPgAeI~--~VR~~p~ 164 (165)
T Consensus 619 ~r~~r~~aErqqqAeqaLqnDP~VQ~L~q~F-gAqL~~eSIrP~D~ 663 (663)
T PRK08770 619 ERANRQKGERQSAAETAFMNDPTVQLLIQQQ-GARVVPDSIRPYDE 663 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-CCEECCCCCCCCCC
T ss_conf 9999999999999999996298999999972-99987787688999