BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 537021.9.peg.473_1 (165 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|239830865|ref|ZP_04679194.1| DNA polymerase III, subunits gamma and tau [Ochrobactrum intermedium LMG 3301] gi|239823132|gb|EEQ94700.1| DNA polymerase III, subunits gamma and tau [Ochrobactrum intermedium LMG 3301] Length = 635 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 16/163 (9%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLA-EAGITEKQDVLNRLSACTPDNYTKQLIELCE 72 DA+ SS A + E P E + +Q V P N ++ L + Sbjct: 445 DAVGSSSMAPASGGPATAMRIVETPPQPVEPSVAPQQFVEPTPQPSVPINSLHDVVALAD 504 Query: 73 KNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG 132 K+ D + +++ + + S GRLE+ + P+ +++ +L NWTG W + + Sbjct: 505 KHRDMQFKILVKSCVRLASIAPGRLEIGLTDDAPKSLPSDISQRLLNWTGIRWIVTVARD 564 Query: 133 RCCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A++ +R Sbjct: 565 VAGQTISEAETERRDNLVTDARADPDVAAILAAFPGAKITDVR 607 >gi|153007366|ref|YP_001368581.1| DNA polymerase III subunits gamma and tau [Ochrobactrum anthropi ATCC 49188] gi|151559254|gb|ABS12752.1| DNA polymerase III, subunits gamma and tau [Ochrobactrum anthropi ATCC 49188] Length = 605 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 15/162 (9%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ SS A + E + +Q V N P N ++ L +K Sbjct: 416 DAVGSSSMAPASGGPATAMRIVETPQPVQPSAAPQQFVENTPQPSVPVNSLHDVVALADK 475 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 + D + +++ + + S GRLE+ + P+ +++ +L NWTG W + + Sbjct: 476 HRDMQFKILVKGCVRLASIAPGRLEIGLTDDAPKSLPSDISQRLLNWTGIRWVVTVARDV 535 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A++ +R Sbjct: 536 AGQTISEAETERRDNLVTDARADPDVAAILAAFPGAKITDVR 577 >gi|325291540|ref|YP_004277404.1| DNA polymerase III subunits gamma and tau [Agrobacterium sp. H13-3] gi|325059393|gb|ADY63084.1| DNA polymerase III subunits gamma and tau [Agrobacterium sp. H13-3] Length = 625 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 15/149 (10%) Query: 27 ALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRF 86 + P + + R P N + + +LC+KN D M ++ F Sbjct: 443 SQPSTMLRAVPDSRPQEMQVAAPKTEERPEPKVPVNSLQDIADLCQKNRDPVMRAKVRNF 502 Query: 87 LHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF-------- 138 + +V E GRL++ P L KLK WTG W + S + Sbjct: 503 VRLVRLEPGRLDMRLGDGAPGSLPGELGVKLKEWTGIHWIVSLSKEQGQPTLVEAEGSAR 562 Query: 139 -------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A++ +R Sbjct: 563 DARLVDARQDPDVAAILQQFPGAKITDVR 591 >gi|15887450|ref|NP_353131.1| DNA polymerase III subunits gamma and tau [Agrobacterium tumefaciens str. C58] gi|15154965|gb|AAK85916.1| DNA polymerase III, tau subunit [Agrobacterium tumefaciens str. C58] Length = 624 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 15/150 (10%) Query: 26 NALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQR 85 P + + R P N + + +LC+KN D M ++ Sbjct: 442 GPQPSTMLRAVPDSRPQEMQVAAPKTEERPEPKVPVNSLQDIADLCQKNRDPVMRAKVRN 501 Query: 86 FLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF------- 138 F+ +V E GRL++ + P L KLK WTG W + S + Sbjct: 502 FVRLVRLEPGRLDMRLGEGAPGSLPGELGVKLKEWTGIHWIVSLSKEQGEPTLVEAEGNA 561 Query: 139 --------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A++ +R Sbjct: 562 RDARLVDARQDPDVAAILAQFPGAKITDVR 591 >gi|197103834|ref|YP_002129211.1| DNA polymerase III subunits gamma and tau [Phenylobacterium zucineum HLK1] gi|196477254|gb|ACG76782.1| DNA polymerase III subunits gamma and tau [Phenylobacterium zucineum HLK1] Length = 605 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 15/121 (12%) Query: 55 LSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLA 114 + ++ L EK D + ++RF+ +S G +E P D + L Sbjct: 462 AEPMAQLASFEDILALIEKKRDITLKLDIERFVRPISVRPGAIEYEPAPGAPRDLAQRLV 521 Query: 115 TKLKNWTGEDWEIRFSLGRCCE---------------YFEIDSDIKAVRTIFPTAQVVCI 159 +L+ WTGE W I G E E D +++V FP A++V I Sbjct: 522 ARLREWTGERWLISAQGGGGAESLWEKQKREQREVRAAIEQDPFVQSVMQAFPGAEIVGI 581 Query: 160 R 160 R Sbjct: 582 R 582 >gi|209551648|ref|YP_002283565.1| DNA polymerase III subunits gamma and tau [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537404|gb|ACI57339.1| DNA polymerase III, subunits gamma and tau [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 626 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 19/158 (12%) Query: 22 AIGENALPRNISSDECFPLAEAGITE----KQDVLNRLSACTPDNYTKQLIELCEKNHDY 77 A G+ ++ P ++ + + P N ++EL + D Sbjct: 435 APGKPQASAPVAMLRAVPSSQPETLPVGRIETKPVETPKPLVPVNSVSDIVELAAEKRDV 494 Query: 78 KMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEY 137 K+ +++ F+ V E GRL+V+ + P + LA KLK WTG W + S Sbjct: 495 KLKALVRNFVRPVRIEPGRLDVNLTEGAPGTLLNELAVKLKEWTGIHWIVSTSREEGGPT 554 Query: 138 F---------------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A+++ +R Sbjct: 555 MVEAEAKAQQQRVSDARQDPDVAAILAQFPGAKIIDVR 592 >gi|190889795|ref|YP_001976337.1| DNA polymerase III, tau subunit protein (DNA-directed DNA polymerase) [Rhizobium etli CIAT 652] gi|190695074|gb|ACE89159.1| DNA polymerase III, tau subunit protein (DNA-directed DNA polymerase) [Rhizobium etli CIAT 652] Length = 623 Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 27/150 (18%) Query: 26 NALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQR 85 N P+ I E P P N +++L + D K+ +++ Sbjct: 452 NPEPQAIGRVETKPAEAPK------------PLVPVNTIGDIVDLAAEKRDVKLKALVRN 499 Query: 86 FLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF------- 138 F+ V E GRL+V+ + P + LA KLK WTG W + S Sbjct: 500 FVRPVRIEPGRLDVNLTEGAPGTLLNELAVKLKEWTGIHWIVSTSREEGGPTMVEAEAKA 559 Query: 139 --------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A+++ +R Sbjct: 560 QQQRVSDARQDPDVAAILAQFPGAKIIDVR 589 >gi|119386357|ref|YP_917412.1| DNA polymerase III subunits gamma and tau [Paracoccus denitrificans PD1222] gi|119376952|gb|ABL71716.1| DNA polymerase III, subunits gamma and tau [Paracoccus denitrificans PD1222] Length = 592 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 28/190 (14%) Query: 1 LHAISWKKRKKKLDALNVSSFAIGE---NALPRNISSDECFPLAEAGITE---KQDVLNR 54 L ++ + L +S A GE NA P + + E P A A T +QD Sbjct: 368 LTHVADLPDPETLIRKVQASAAAGEFSRNAAP-SAARGEAPPRAAAPRTPVAVRQDGSAA 426 Query: 55 LSACTPDN-----YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDF 109 A +PD + +IEL + D K++ ++ L +V + GR+E + P DF Sbjct: 427 ALAVSPDALAGFPDFESVIELIRRMRDMKLLLDVEDHLRLVRYSPGRIEFQPTDKAPRDF 486 Query: 110 IENLATKLKNWT-GEDWEIRFS--LGRCCEYFE-------------IDSDIKAVRTIFPT 153 + LA +L+ WT G+ W + + GR + + ++A+ FP Sbjct: 487 AQRLAERLRGWTGGQRWAVTVTSEAGRPTISEQRAAREAEARARAMQNPTVQAIFAAFPG 546 Query: 154 AQVVCIRTIP 163 A++ IR IP Sbjct: 547 AKITQIRPIP 556 >gi|86355786|ref|YP_467678.1| DNA polymerase III subunits gamma and tau [Rhizobium etli CFN 42] gi|86279888|gb|ABC88951.1| DNA polymerase III, tau subunit protein [Rhizobium etli CFN 42] Length = 624 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 19/160 (11%) Query: 20 SFAIGENALPRNISSDECFPLAEAGITEKQDVLNRL----SACTPDNYTKQLIELCEKNH 75 A + ++ P ++ T + + N ++ L + Sbjct: 432 DIAPSKPQPSVPVAMLRAVPSSQPETTPVGRIEAKPAEAPKPLVKVNSVGDIVNLATEKR 491 Query: 76 DYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCC 135 D K+ M++ F+ V E GRL+VS + P + LA KLK WTG W + S Sbjct: 492 DAKLKAMVRNFVRPVRIEPGRLDVSLTEGAPTTLLNELAVKLKEWTGIHWIVSLSRDEGQ 551 Query: 136 EYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A+++ +R Sbjct: 552 PTLVEAEARTREQHVIDARQDPDVAAILAHFPGAKIIDVR 591 >gi|149916416|ref|ZP_01904935.1| DNA polymerase III subunits gamma and tau [Roseobacter sp. AzwK-3b] gi|149809686|gb|EDM69540.1| DNA polymerase III subunits gamma and tau [Roseobacter sp. AzwK-3b] Length = 596 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 15/161 (9%) Query: 20 SFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKM 79 + A +P P A A ++ + +A + ++EL + D K+ Sbjct: 414 ASAGQSTTIPAAAHPGPSAPGARAPSGQQALAVAAETALAHYPTFEHVVELIRAHRDVKL 473 Query: 80 VEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYFE 139 + ++ + +VS+ GR+ P+D + L L+ WTG W I + Sbjct: 474 LVEVETNMRLVSYRPGRITFQPTGNAPQDLSQRLGAALQRWTGNRWGISLVNEGGADTIA 533 Query: 140 ---------------IDSDIKAVRTIFPTAQVVCIRTIPNL 165 ++AV + FP AQ+ IRT ++ Sbjct: 534 EQRDAAETALRHEVSRHPLVQAVLSAFPKAQITSIRTEADI 574 >gi|256112542|ref|ZP_05453463.1| DNA polymerase III subunits gamma and tau [Brucella melitensis bv. 3 str. Ether] gi|265993981|ref|ZP_06106538.1| DNA polymerase III gamma and tau [Brucella melitensis bv. 3 str. Ether] gi|262764962|gb|EEZ10883.1| DNA polymerase III gamma and tau [Brucella melitensis bv. 3 str. Ether] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + +I L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIIALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|89069708|ref|ZP_01157044.1| DNA polymerase III subunits gamma and tau [Oceanicola granulosus HTCC2516] gi|89044654|gb|EAR50765.1| DNA polymerase III subunits gamma and tau [Oceanicola granulosus HTCC2516] Length = 583 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 15/124 (12%) Query: 53 NRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 +A ++EL + D K++ ++ L +VS+ GR+E+ + P D Sbjct: 434 KSETALAHYPSFAHVVELIRHHRDVKLLVEVETNLRLVSYSPGRIEMEPTETAPPDLAAK 493 Query: 113 LATKLKNWTGEDWEIRFS--LGRCCEYFEID-------------SDIKAVRTIFPTAQVV 157 L ++L+ WTG W + S G E D ++AV FP A++ Sbjct: 494 LGSRLQAWTGVRWAVSVSSGGGGPTIAEERDAAELALKAEAAAHPLVQAVLQAFPKARIT 553 Query: 158 CIRT 161 +RT Sbjct: 554 EVRT 557 >gi|254707264|ref|ZP_05169092.1| DNA polymerase III subunits gamma and tau [Brucella pinnipedialis M163/99/10] gi|261314747|ref|ZP_05953944.1| DNA polymerase III gamma and tau [Brucella pinnipedialis M163/99/10] gi|261303773|gb|EEY07270.1| DNA polymerase III gamma and tau [Brucella pinnipedialis M163/99/10] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAAQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|254718255|ref|ZP_05180066.1| DNA polymerase III subunits gamma and tau [Brucella sp. 83/13] gi|265983215|ref|ZP_06095950.1| DNA polymerase III gamma and tau [Brucella sp. 83/13] gi|306839997|ref|ZP_07472791.1| DNA polymerase III, subunits gamma and tau [Brucella sp. NF 2653] gi|264661807|gb|EEZ32068.1| DNA polymerase III gamma and tau [Brucella sp. 83/13] gi|306404961|gb|EFM61246.1| DNA polymerase III, subunits gamma and tau [Brucella sp. NF 2653] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|254694837|ref|ZP_05156665.1| DNA polymerase III subunits gamma and tau [Brucella abortus bv. 3 str. Tulya] gi|261215165|ref|ZP_05929446.1| DNA polymerase III gamma and tau [Brucella abortus bv. 3 str. Tulya] gi|260916772|gb|EEX83633.1| DNA polymerase III gamma and tau [Brucella abortus bv. 3 str. Tulya] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|17988191|ref|NP_540825.1| DNA polymerase III subunits gamma and tau [Brucella melitensis bv. 1 str. 16M] gi|225851577|ref|YP_002731810.1| DNA polymerase III subunits gamma and tau [Brucella melitensis ATCC 23457] gi|256045825|ref|ZP_05448701.1| DNA polymerase III subunits gamma and tau [Brucella melitensis bv. 1 str. Rev.1] gi|256264911|ref|ZP_05467443.1| DNA polymerase III subunit gamma and tau [Brucella melitensis bv. 2 str. 63/9] gi|260563116|ref|ZP_05833602.1| DNA polymerase III gamma and tau subunit [Brucella melitensis bv. 1 str. 16M] gi|265992238|ref|ZP_06104795.1| DNA polymerase III gamma and tau [Brucella melitensis bv. 1 str. Rev.1] gi|17983953|gb|AAL53089.1| DNA polymerase iii subunits gamma and tau [Brucella melitensis bv. 1 str. 16M] gi|225639942|gb|ACN99855.1| DNA polymerase III, subunits gamma and tau [Brucella melitensis ATCC 23457] gi|260153132|gb|EEW88224.1| DNA polymerase III gamma and tau subunit [Brucella melitensis bv. 1 str. 16M] gi|263003304|gb|EEZ15597.1| DNA polymerase III gamma and tau [Brucella melitensis bv. 1 str. Rev.1] gi|263095396|gb|EEZ18997.1| DNA polymerase III subunit gamma and tau [Brucella melitensis bv. 2 str. 63/9] gi|326408046|gb|ADZ65111.1| DNA polymerase III subunits gamma and tau [Brucella melitensis M28] gi|326537763|gb|ADZ85978.1| DNA polymerase III, subunits gamma and tau [Brucella melitensis M5-90] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|306842673|ref|ZP_07475317.1| DNA polymerase III, subunits gamma and tau [Brucella sp. BO2] gi|306287182|gb|EFM58681.1| DNA polymerase III, subunits gamma and tau [Brucella sp. BO2] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|225626583|ref|ZP_03784622.1| DNA polymerase III, subunits gamma and tau [Brucella ceti str. Cudo] gi|260169621|ref|ZP_05756432.1| DNA polymerase III subunits gamma and tau [Brucella sp. F5/99] gi|261759150|ref|ZP_06002859.1| DNA polymerase III gamma and tau [Brucella sp. F5/99] gi|225618240|gb|EEH15283.1| DNA polymerase III, subunits gamma and tau [Brucella ceti str. Cudo] gi|261739134|gb|EEY27130.1| DNA polymerase III gamma and tau [Brucella sp. F5/99] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|148559186|ref|YP_001258081.1| DNA polymerase III subunits gamma and tau [Brucella ovis ATCC 25840] gi|148370443|gb|ABQ60422.1| replication factor C conserved domain:ATP/GTP-binding site motif A [Brucella ovis ATCC 25840] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|62289022|ref|YP_220815.1| DNA polymerase III subunits gamma and tau [Brucella abortus bv. 1 str. 9-941] gi|82698960|ref|YP_413534.1| DNA polymerase III subunits gamma and tau [Brucella melitensis biovar Abortus 2308] gi|161618024|ref|YP_001591911.1| DNA polymerase III subunits gamma and tau [Brucella canis ATCC 23365] gi|189023298|ref|YP_001934066.1| DNA polymerase III subunits gamma and tau [Brucella abortus S19] gi|237814509|ref|ZP_04593507.1| DNA polymerase III, subunits gamma and tau [Brucella abortus str. 2308 A] gi|254690348|ref|ZP_05153602.1| DNA polymerase III subunits gamma and tau [Brucella abortus bv. 6 str. 870] gi|254696466|ref|ZP_05158294.1| DNA polymerase III subunits gamma and tau [Brucella abortus bv. 2 str. 86/8/59] gi|254700849|ref|ZP_05162677.1| DNA polymerase III subunits gamma and tau [Brucella suis bv. 5 str. 513] gi|254705216|ref|ZP_05167044.1| DNA polymerase III subunits gamma and tau [Brucella suis bv. 3 str. 686] gi|254709194|ref|ZP_05171005.1| DNA polymerase III subunits gamma and tau [Brucella pinnipedialis B2/94] gi|254731378|ref|ZP_05189956.1| DNA polymerase III subunits gamma and tau [Brucella abortus bv. 4 str. 292] gi|256030718|ref|ZP_05444332.1| DNA polymerase III subunits gamma and tau [Brucella pinnipedialis M292/94/1] gi|256060177|ref|ZP_05450357.1| DNA polymerase III subunits gamma and tau [Brucella neotomae 5K33] gi|256158724|ref|ZP_05456599.1| DNA polymerase III subunits gamma and tau [Brucella ceti M490/95/1] gi|256254122|ref|ZP_05459658.1| DNA polymerase III subunits gamma and tau [Brucella ceti B1/94] gi|256258602|ref|ZP_05464138.1| DNA polymerase III subunits gamma and tau [Brucella abortus bv. 9 str. C68] gi|256368500|ref|YP_003106006.1| DNA polymerase III subunits gamma and tau [Brucella microti CCM 4915] gi|260546316|ref|ZP_05822056.1| DNA polymerase III gamma and tau subunit [Brucella abortus NCTC 8038] gi|260567317|ref|ZP_05837787.1| DNA polymerase III gamma and tau [Brucella suis bv. 4 str. 40] gi|260755890|ref|ZP_05868238.1| DNA polymerase III gamma and tau [Brucella abortus bv. 6 str. 870] gi|260759114|ref|ZP_05871462.1| DNA polymerase III gamma and tau [Brucella abortus bv. 4 str. 292] gi|260760839|ref|ZP_05873182.1| DNA polymerase III gamma and tau [Brucella abortus bv. 2 str. 86/8/59] gi|260884914|ref|ZP_05896528.1| DNA polymerase III gamma and tau [Brucella abortus bv. 9 str. C68] gi|261221264|ref|ZP_05935545.1| DNA polymerase III gamma and tau [Brucella ceti B1/94] gi|261316694|ref|ZP_05955891.1| DNA polymerase III gamma and tau [Brucella pinnipedialis B2/94] gi|261324154|ref|ZP_05963351.1| DNA polymerase III gamma and tau [Brucella neotomae 5K33] gi|261751359|ref|ZP_05995068.1| DNA polymerase III gamma and tau [Brucella suis bv. 5 str. 513] gi|261755924|ref|ZP_05999633.1| DNA polymerase III gamma and tau [Brucella suis bv. 3 str. 686] gi|265987764|ref|ZP_06100321.1| DNA polymerase III gamma and tau [Brucella pinnipedialis M292/94/1] gi|265997225|ref|ZP_06109782.1| DNA polymerase III gamma and tau [Brucella ceti M490/95/1] gi|297247441|ref|ZP_06931159.1| DNA polymerase III subunit gamma/tau [Brucella abortus bv. 5 str. B3196] gi|62195154|gb|AAX73454.1| DnaX, DNA polymerase III, gamma and tau subunits [Brucella abortus bv. 1 str. 9-941] gi|82615061|emb|CAJ09987.1| Replication factor C conserved domain:ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region [Brucella melitensis biovar Abortus 2308] gi|161334835|gb|ABX61140.1| DNA polymerase III, subunits gamma and tau [Brucella canis ATCC 23365] gi|189018870|gb|ACD71592.1| DNA polymerase III subunits gamma and tau [Brucella abortus S19] gi|237789346|gb|EEP63556.1| DNA polymerase III, subunits gamma and tau [Brucella abortus str. 2308 A] gi|255998658|gb|ACU47057.1| DNA polymerase III subunits gamma and tau [Brucella microti CCM 4915] gi|260096423|gb|EEW80299.1| DNA polymerase III gamma and tau subunit [Brucella abortus NCTC 8038] gi|260156835|gb|EEW91915.1| DNA polymerase III gamma and tau [Brucella suis bv. 4 str. 40] gi|260669432|gb|EEX56372.1| DNA polymerase III gamma and tau [Brucella abortus bv. 4 str. 292] gi|260671271|gb|EEX58092.1| DNA polymerase III gamma and tau [Brucella abortus bv. 2 str. 86/8/59] gi|260675998|gb|EEX62819.1| DNA polymerase III gamma and tau [Brucella abortus bv. 6 str. 870] gi|260874442|gb|EEX81511.1| DNA polymerase III gamma and tau [Brucella abortus bv. 9 str. C68] gi|260919848|gb|EEX86501.1| DNA polymerase III gamma and tau [Brucella ceti B1/94] gi|261295917|gb|EEX99413.1| DNA polymerase III gamma and tau [Brucella pinnipedialis B2/94] gi|261300134|gb|EEY03631.1| DNA polymerase III gamma and tau [Brucella neotomae 5K33] gi|261741112|gb|EEY29038.1| DNA polymerase III gamma and tau [Brucella suis bv. 5 str. 513] gi|261745677|gb|EEY33603.1| DNA polymerase III gamma and tau [Brucella suis bv. 3 str. 686] gi|262551693|gb|EEZ07683.1| DNA polymerase III gamma and tau [Brucella ceti M490/95/1] gi|264659961|gb|EEZ30222.1| DNA polymerase III gamma and tau [Brucella pinnipedialis M292/94/1] gi|297174610|gb|EFH33957.1| DNA polymerase III subunit gamma/tau [Brucella abortus bv. 5 str. B3196] Length = 602 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|306843634|ref|ZP_07476235.1| DNA polymerase III, subunits gamma and tau [Brucella sp. BO1] gi|306276325|gb|EFM58025.1| DNA polymerase III, subunits gamma and tau [Brucella sp. BO1] Length = 602 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|254713381|ref|ZP_05175192.1| DNA polymerase III subunits gamma and tau [Brucella ceti M644/93/1] gi|254716261|ref|ZP_05178072.1| DNA polymerase III subunits gamma and tau [Brucella ceti M13/05/1] gi|261218037|ref|ZP_05932318.1| DNA polymerase III gamma and tau [Brucella ceti M13/05/1] gi|261321113|ref|ZP_05960310.1| DNA polymerase III gamma and tau [Brucella ceti M644/93/1] gi|260923126|gb|EEX89694.1| DNA polymerase III gamma and tau [Brucella ceti M13/05/1] gi|261293803|gb|EEX97299.1| DNA polymerase III gamma and tau [Brucella ceti M644/93/1] Length = 602 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|163842310|ref|YP_001626714.1| DNA polymerase III subunits gamma and tau [Brucella suis ATCC 23445] gi|163673033|gb|ABY37144.1| DNA polymerase III, subunits gamma and tau [Brucella suis ATCC 23445] Length = 602 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|23500949|ref|NP_697076.1| DNA polymerase III subunits gamma and tau [Brucella suis 1330] gi|23346805|gb|AAN28991.1| DNA polymerase III, gamma and tau subunits [Brucella suis 1330] Length = 602 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPSDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|298294413|ref|YP_003696352.1| DNA polymerase III subunits gamma and tau [Starkeya novella DSM 506] gi|296930924|gb|ADH91733.1| DNA polymerase III, subunits gamma and tau [Starkeya novella DSM 506] Length = 658 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 15/116 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 ++L+ L + D +M L+ + +V+FE G+LE++ + ++ L KL W Sbjct: 511 IATFEELVALASQKRDLRMKFALENNVRLVAFEDGKLELALAAGGSPNLVQELQGKLSEW 570 Query: 121 TGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRT 161 TG+ W + S D + A FP A +V +RT Sbjct: 571 TGKRWLVALSREEGEPTLAEQAKSARDAMMTGVRADPLVAAALARFPGASIVDVRT 626 >gi|158421766|ref|YP_001523058.1| ATPase [Azorhizobium caulinodans ORS 571] gi|158328655|dbj|BAF86140.1| ATPase [Azorhizobium caulinodans ORS 571] Length = 613 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 15/120 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + ++ L + D + ++ +V FE GR+E+S + +++L+ KL W Sbjct: 468 LSSLADVVALATQKRDLMLKHAVESHARLVHFEEGRIEISMAPGGDPNLVQDLSRKLAEW 527 Query: 121 TGEDWEIRFSLGRC---------------CEYFEIDSDIKAVRTIFPTAQVVCIRTIPNL 165 TG W + S + + + + AV + FP AQ+V +R + Sbjct: 528 TGRRWLVSLSSKQGEATIAEIARAAREEREDGIRAEPLVAAVLSQFPGAQIVDVRIKEEV 587 >gi|71083213|ref|YP_265932.1| DNA-directed DNA polymerase subunit gamma/tau [Candidatus Pelagibacter ubique HTCC1062] gi|71062326|gb|AAZ21329.1| DNA-directed DNA polymerase gamma/tau subunit [Candidatus Pelagibacter ubique HTCC1062] Length = 557 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 27/191 (14%) Query: 1 LHAISWKKRKKKLDAL------NVSSFAIGENA------LPRNISSDECFPLAEAGITEK 48 L +I + K K D+ N +SF+ + ++ + + + + ++ Sbjct: 366 LKSIKQESEKYKEDSKLLVESENQTSFSPKKTNEDIFGIKDKSETIGQMKNIVQEKDIKE 425 Query: 49 QDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPED 108 ++ N + + N L++ C + K+ L++ +++VSFE R+E+SF +++ +D Sbjct: 426 KENNNIETNTSLINSFDDLLKACSSKKEIKLKYELEKNVNLVSFENKRIEISFNEDLDKD 485 Query: 109 FIENLATKLKNWTGEDWEIRFSLGRC---------------CEYFEIDSDIKAVRTIFPT 153 FI++L+TKL WT E W I S + E + S K + FP Sbjct: 486 FIKDLSTKLFEWTNERWIISLSKTKGQPSKKEEEINEKKELIESVKNSSIYKDILKNFPD 545 Query: 154 AQVVCIRTIPN 164 A+++ ++ Sbjct: 546 AELIDVKPRKE 556 >gi|222084336|ref|YP_002542865.1| DNA polymerase III [Agrobacterium radiobacter K84] gi|221721784|gb|ACM24940.1| DNA polymerase III [Agrobacterium radiobacter K84] Length = 625 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 17/147 (11%) Query: 35 DECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL 94 + A G E++ V N + EL + D K+ M++ F+ V E Sbjct: 453 NTQPDSAPVGRIEQKPV-EAPKPLIAINSMTDIAELAGQKRDPKLKAMVRSFVRPVRLEP 511 Query: 95 GRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF---------------E 139 GRL+VS P + LA KLK WTG W + S Sbjct: 512 GRLDVSLTPGAPGTLLNELAVKLKEWTGIHWIVSLSRDEGEPTVVEAEANAQRQRVADAR 571 Query: 140 IDSDIKAVRTIFPTAQVVCIR-TIPNL 165 D D+ A+ + FP A+++ +R P++ Sbjct: 572 QDPDVAAILSQFPGAKIIDVRVRAPDV 598 >gi|294851443|ref|ZP_06792116.1| DNA polymerase III subunit gamma/tau [Brucella sp. NVSL 07-0026] gi|294820032|gb|EFG37031.1| DNA polymerase III subunit gamma/tau [Brucella sp. NVSL 07-0026] Length = 602 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA+ S+ A + E P+ + + P N + ++ L +K Sbjct: 416 DAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPSE---AAPQPSVPINSLQDIVALADK 472 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGR 133 D + +++ + S GRLE+ + P+ ++A L NWTG W + + Sbjct: 473 YRDMQFKILVKNCVRPASIAPGRLEIGLTDDAPKSLPIDIAQHLLNWTGIRWVVTVARDV 532 Query: 134 CCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ FP A+++ +R Sbjct: 533 AGQTIAEAEAERRDNLVTDARADPDVAAILAAFPGAKIIDVR 574 >gi|170742371|ref|YP_001771026.1| DNA polymerase III subunits gamma and tau [Methylobacterium sp. 4-46] gi|168196645|gb|ACA18592.1| DNA polymerase III, subunits gamma and tau [Methylobacterium sp. 4-46] Length = 605 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 15/115 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + ++ L E D + L+R +H+V FE GR+E + +LA L WTG Sbjct: 468 FEDVVALAEAKRDIGLKAALERDVHLVRFEEGRIEFRLAEAGRPSLANDLARALDLWTGR 527 Query: 124 DWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVVCIRTIP 163 W + S + ++ V FP AQ+V +R P Sbjct: 528 RWVVALSRETGEATLAARAEAARESRHQGAAAHPLVQEVLKRFPGAQIVDVRERP 582 >gi|116249901|ref|YP_765739.1| DNA polymerase III subunits gamma and tau [Rhizobium leguminosarum bv. viciae 3841] gi|115254549|emb|CAK05623.1| putative DNA polymerase III [Rhizobium leguminosarum bv. viciae 3841] Length = 625 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 17/146 (11%) Query: 30 RNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHV 89 R + S + +A I K + P N ++ L + D K+ M++ FL Sbjct: 449 RAVPSSQSETMAVGRIEPKPAEAPK--PLVPVNSVNDIVNLATEKRDPKLKAMVRTFLRP 506 Query: 90 VSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF----------- 138 V E GRL+VS P + LA KLK WTG W + S Sbjct: 507 VRIEAGRLDVSLAPGAPTTLLNELAVKLKEWTGIHWIVSLSRDEGQPTLVEAEARTREQH 566 Query: 139 ----EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A+++ +R Sbjct: 567 VIDARQDPDVAAILAHFPGAKIIDVR 592 >gi|328541815|ref|YP_004301924.1| DNA polymerase III subunits gamma and tau [Polymorphum gilvum SL003B-26A1] gi|326411567|gb|ADZ68630.1| DNA polymerase III subunits gamma and tau [Polymorphum gilvum SL003B-26A1] Length = 673 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 17/154 (11%) Query: 26 NALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQR 85 P+ + P T Q S + L + D + ++R Sbjct: 500 GGAPQQAMAPAQTPAQTPAQTPVQ--SPHWSPAVRLASLQDCAALASEKRDIPLKVAIER 557 Query: 86 FLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFS--LGRCCEYFEI--- 140 + +V F+ GR+E + D L KL WTG W + S GR + E Sbjct: 558 QMRLVRFDPGRIEFQPTPDAGADLAGELGRKLTEWTGMRWIVSVSRTQGRPTIHEEREAN 617 Query: 141 ----------DSDIKAVRTIFPTAQVVCIRTIPN 164 + A+ T FP A+VV +R + Sbjct: 618 QAQLLSDARSHPTVAALLTEFPGARVVDVRVQDD 651 >gi|262277951|ref|ZP_06055744.1| DNA polymerase III subunit gamma/tau [alpha proteobacterium HIMB114] gi|262225054|gb|EEY75513.1| DNA polymerase III subunit gamma/tau [alpha proteobacterium HIMB114] Length = 553 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 16/168 (9%) Query: 10 KKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIE 69 + K ++ + N S+ + +++ + KQ+ LN+ + + N ++LI Sbjct: 380 ESKEESKINTEHNKTSNQKINLQSTTQIKNVSQEIESPKQN-LNQNNLTSKINSFEELIS 438 Query: 70 LCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF 129 L EK + ++ L+R + +V F G++++ F +++ ++FI+NL ++L WTG W I Sbjct: 439 LVEKKKEIELKFDLERNIRLVKFSEGKIDIEFNEKLSKNFIKNLTSRLLEWTGNRWIITL 498 Query: 130 SLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTI 162 S + + + K V +FP A++ + + Sbjct: 499 SKSKGDQTIYEKKNEVKKMLFEDAKKTEIYKKVMELFPNAELTNVEEV 546 >gi|307942775|ref|ZP_07658120.1| DNA polymerase III subunit tau [Roseibium sp. TrichSKD4] gi|307773571|gb|EFO32787.1| DNA polymerase III subunit tau [Roseibium sp. TrichSKD4] Length = 610 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 15/141 (10%) Query: 35 DECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL 94 + + +A D + + L +N D M ++R + +V FE+ Sbjct: 446 PQVQAVPQAVAQSAPDPTPAPVPKVALHSLQDCAALASENRDIPMKVAIERQMRLVKFEV 505 Query: 95 GRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF--SLGRCCEYFEI------------ 140 GR+E+ ++ P D KL WTG W + + GR + E Sbjct: 506 GRIEIQPTEDAPADISGEFGRKLTEWTGIRWIVSVAKTGGRPTIHEEREANQAQLVSDAK 565 Query: 141 -DSDIKAVRTIFPTAQVVCIR 160 + A+ + FP A+VV +R Sbjct: 566 SHPTVAALLSQFPGAKVVDVR 586 >gi|241207078|ref|YP_002978174.1| DNA polymerase III subunits gamma/tau [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860968|gb|ACS58635.1| DNA polymerase III, subunits gamma and tau [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 625 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 15/128 (11%) Query: 48 KQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPE 107 + L P N ++ L + D K+ M++ FL V E GRL+VS P Sbjct: 465 EPKPAEALKPLVPVNSVNDIVNLATEKRDPKLKAMVRTFLRPVRIEAGRLDVSLAPGAPT 524 Query: 108 DFIENLATKLKNWTGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFP 152 + LA KLK WTG W + S D D+ A+ FP Sbjct: 525 TLLNELAVKLKEWTGIHWIVSLSRDEGQPTLVEAEARTREQHVIDARQDPDVAAILAHFP 584 Query: 153 TAQVVCIR 160 A+++ +R Sbjct: 585 GAKIIDVR 592 >gi|110636381|ref|YP_676589.1| DNA polymerase III subunits gamma and tau [Mesorhizobium sp. BNC1] gi|110287365|gb|ABG65424.1| DNA polymerase III, tau subunit [Chelativorans sp. BNC1] Length = 600 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 19/162 (11%) Query: 18 VSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDY 77 +SS + + + + P A + P + EL + N D Sbjct: 419 ISSQRMPSGGGGQTMRLIQSSPAEYAA---SPQPAEAEAPSVPVKSLADITELADANRDI 475 Query: 78 KMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEY 137 +R + +V E GRL V+ ++ P+ + +L +L+ WTG W + S + Sbjct: 476 AFKVQFKRCVRLVQIEPGRLSVNLTEDAPKTLLGDLTNRLQKWTGRRWIVSLSNEPGSKT 535 Query: 138 F---------------EIDSDIKAVRTIFPTAQVVCIRTIPN 164 D + A+ FP A+++ +R IP+ Sbjct: 536 LAEEESGRRETALADARADPTVAAILQSFPGARILDVR-IPD 576 >gi|150398618|ref|YP_001329085.1| DNA polymerase III subunits gamma and tau [Sinorhizobium medicae WSM419] gi|150030133|gb|ABR62250.1| DNA polymerase III, subunits gamma and tau [Sinorhizobium medicae WSM419] Length = 625 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 23/153 (15%) Query: 23 IGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEM 82 A P + E P+A + V P N + +LC KN D K+ + Sbjct: 451 PNSAAQPVEVGRIEERPIASPAAKPEPKV--------PVNSVGDIADLCAKNRDIKLKTL 502 Query: 83 LQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFS--LGRCCEYF-- 138 ++ FL +V E GRL+V+ + P+ + LA KLK WTG W + +S G Sbjct: 503 VRGFLRLVHIEPGRLDVNLPDDAPKTLLNELAVKLKEWTGIHWVVSYSREQGEPTLAEAE 562 Query: 139 -----------EIDSDIKAVRTIFPTAQVVCIR 160 D + A+ FP A++ +R Sbjct: 563 QRAQEQRVNDAREDPVVAAILARFPGARITDVR 595 >gi|254464305|ref|ZP_05077716.1| DNA polymerase III, tau subunit [Rhodobacterales bacterium Y4I] gi|206685213|gb|EDZ45695.1| DNA polymerase III, tau subunit [Rhodobacterales bacterium Y4I] Length = 601 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL N D K++ ++ + +VS++ GR+E + + P D L + L+NWTG Sbjct: 462 SFEHVVELIRTNRDVKLLVEVETGVRLVSYQPGRIEFTPSAQAPRDLAARLGSALQNWTG 521 Query: 123 EDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + + E ++AV FP A++ IRT L Sbjct: 522 ARWVVSIAPDGDAPTIAEVRDAAENALREKAAAHPLVQAVLESFPKAKITRIRTPEEL 579 >gi|91762357|ref|ZP_01264322.1| DNA-directed DNA polymerase gamma/tau subunit [Candidatus Pelagibacter ubique HTCC1002] gi|91718159|gb|EAS84809.1| DNA-directed DNA polymerase gamma/tau subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 557 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 27/191 (14%) Query: 1 LHAISWKKRKKKLDAL------NVSSFAIGENA------LPRNISSDECFPLAEAGITEK 48 L +I + K K D+ N +SF+ + ++ + + + + ++ Sbjct: 366 LKSIKQESDKYKEDSKLLSESENQTSFSSKKTNEDIFGIKDKSETIGQMKNIVQEKDIKE 425 Query: 49 QDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPED 108 ++ N + + N L++ C + K+ L++ +++VSFE R+E+SF +++ +D Sbjct: 426 KENNNIETNTSLINSFDDLLKACSSKKEIKLKYELEKNVNLVSFENKRIEISFNEDLDKD 485 Query: 109 FIENLATKLKNWTGEDWEIRFSLGRC---------------CEYFEIDSDIKAVRTIFPT 153 FI++L+TKL WT E W I S + E + S K + FP Sbjct: 486 FIKDLSTKLFEWTNERWIISLSKTKGQPSKKEEEINQKKELIESVKNSSIYKDILKSFPD 545 Query: 154 AQVVCIRTIPN 164 A+++ ++ Sbjct: 546 AELIDVKPRKE 556 >gi|170749547|ref|YP_001755807.1| DNA polymerase III, subunits gamma and tau [Methylobacterium radiotolerans JCM 2831] gi|170656069|gb|ACB25124.1| DNA polymerase III, subunits gamma and tau [Methylobacterium radiotolerans JCM 2831] Length = 637 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 15/113 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + LI L + N D + L+R +H+V FE GR+E ++A ++ WTG Sbjct: 495 FEDLIALADANRDILLRTALERDVHLVRFEEGRMEFRLASGGRSSLATDIAAAIERWTGR 554 Query: 124 DWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRT 161 W + S D ++ V T FP A++V +R Sbjct: 555 RWVVALSKDEGAPTLDAAARAATETRRENAAADPFVREVLTRFPGAEIVDVRE 607 >gi|15963983|ref|NP_384336.1| DNA polymerase III subunits gamma and tau [Sinorhizobium meliloti 1021] gi|15073159|emb|CAC41667.1| Putative DNA polymerase III subunit TAU protein [Sinorhizobium meliloti 1021] Length = 626 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 22 AIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVE 81 A+ +A P+ IS A K + P N + +LC KN D K+ Sbjct: 449 AVPSSAPPQPISVGRIEERTVASAAAKPE------PKVPVNSIGDIADLCAKNRDIKLKT 502 Query: 82 MLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF--- 138 M++ FL +V E GRL+V+ ++ P+ + LA KLK WTG W + +S + Sbjct: 503 MVRGFLRLVHIEPGRLDVNLPEDAPKTLLNELAVKLKEWTGIHWVVSYSREQGEPTLVEA 562 Query: 139 ------------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A++ +R Sbjct: 563 EQRAQEQRVNDARQDPDVAAILARFPGARITDVR 596 >gi|222147106|ref|YP_002548063.1| DNA polymerase III subunits gamma and tau [Agrobacterium vitis S4] gi|221734096|gb|ACM35059.1| DNA polymerase III subunits gamma and tau [Agrobacterium vitis S4] Length = 631 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 24/153 (15%) Query: 23 IGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEM 82 + P + E P + + E P ++ LC N D K+ + Sbjct: 455 PKASPSPDIAARPETKPEIQPDVPE---------PKVPVRSLDDIVHLCTANRDPKLKAL 505 Query: 83 LQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRC----CEYF 138 + ++ +V E GRLE++ E P+ + +L +L+ WT W + S E Sbjct: 506 TRAYVRLVKLENGRLEINLPPEAPKSLVGDLQKRLEEWTDIRWMVILSREPGEKTLAEQE 565 Query: 139 E-----------IDSDIKAVRTIFPTAQVVCIR 160 + D D+ A+ + FP A++ +R Sbjct: 566 KSDHEARMTDAAADPDVMAILSRFPGAKITDVR 598 >gi|330813511|ref|YP_004357750.1| DNA polymerase III subunits gamma and tau [Candidatus Pelagibacter sp. IMCC9063] gi|327486606|gb|AEA81011.1| DNA polymerase III subunits gamma and tau [Candidatus Pelagibacter sp. IMCC9063] Length = 531 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 16/165 (9%) Query: 12 KLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELC 71 + + N ++ E + + + E K D +N S+ + ++L++L Sbjct: 364 ETETYNNTTGLKAEPLISKTQIKNTIQEKKEVPKI-KPDTVNLASSTQEIHSFQELVDLT 422 Query: 72 EKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSL 131 K+ + ++ L+R + +V F+ G++++SF + + +DFI+NL+ KL WTG+ W I S Sbjct: 423 NKHKEIELKFDLERNVRLVKFDQGKIDISFNESLSKDFIKNLSLKLNEWTGKRWMITLSK 482 Query: 132 GRCC---------------EYFEIDSDIKAVRTIFPTAQVVCIRT 161 + + K V FP A+++ ++ Sbjct: 483 AEGETSIYETKSQLKEETLKDIKQTEAYKKVLEAFPDAELIDVQE 527 >gi|307306395|ref|ZP_07586139.1| DNA polymerase III, subunits gamma and tau [Sinorhizobium meliloti BL225C] gi|306902237|gb|EFN32834.1| DNA polymerase III, subunits gamma and tau [Sinorhizobium meliloti BL225C] Length = 626 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 21/154 (13%) Query: 22 AIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVE 81 A+ +A P+ IS A K + P N + +LC KN D K+ Sbjct: 449 AVPSSAPPQPISVGRIEERTVASAAAKPE------PKVPVNSIGDIADLCAKNRDIKLKT 502 Query: 82 MLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF--- 138 M++ FL +V E GRL+V+ + P+ + LA KLK WTG W + +S + Sbjct: 503 MVRGFLRLVHIEPGRLDVNLPDDAPKTLLNELAVKLKEWTGIHWVVSYSREQGEPTLVEA 562 Query: 139 ------------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A++ +R Sbjct: 563 EQRAQEQRVNDARQDPDVAAILARFPGARITDVR 596 >gi|307319282|ref|ZP_07598711.1| DNA polymerase III, subunits gamma and tau [Sinorhizobium meliloti AK83] gi|306895118|gb|EFN25875.1| DNA polymerase III, subunits gamma and tau [Sinorhizobium meliloti AK83] Length = 626 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 21/154 (13%) Query: 22 AIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVE 81 A+ +A P+ IS A K + P N + +LC KN D K+ Sbjct: 449 AVPSSAPPQPISVGRIEERTVASAAAKPE------PKVPVNSIGDIADLCAKNRDIKLKT 502 Query: 82 MLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF--- 138 M++ FL +V E GRL+V+ + P+ + LA KLK WTG W + +S + Sbjct: 503 MVRGFLRLVHIEPGRLDVNLPDDAPKTLLNELAVKLKEWTGIHWVVSYSREQGEPTLVEA 562 Query: 139 ------------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A++ +R Sbjct: 563 EQRAQEQRVNDARQDPDVAAILARFPGARITDVR 596 >gi|299132608|ref|ZP_07025803.1| DNA polymerase III, subunits gamma and tau [Afipia sp. 1NLS2] gi|298592745|gb|EFI52945.1| DNA polymerase III, subunits gamma and tau [Afipia sp. 1NLS2] Length = 616 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 17/152 (11%) Query: 27 ALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRF 86 +P SS E + + V + + +++ L + D + L+ Sbjct: 446 TMPPQRSSGETVARQQP--QPVESVAPQSVPTRRLSSYPEIVALASEKRDIALKAALEAD 503 Query: 87 LHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRC------------ 134 L +V E GRLE++ + + +L KL+ WTG W + S Sbjct: 504 LRLVRMEDGRLEIALERSAARSVVNDLQRKLEQWTGRRWAVVVSNEEGQPTLRAQAQERK 563 Query: 135 ---CEYFEIDSDIKAVRTIFPTAQVVCIRTIP 163 E + D ++AV FP AQVV +R + Sbjct: 564 DKLTENVQADPRVQAVMAAFPGAQVVDVRRLA 595 >gi|312114329|ref|YP_004011925.1| DNA polymerase III subunits gamma and tau [Rhodomicrobium vannielii ATCC 17100] gi|311219458|gb|ADP70826.1| DNA polymerase III, subunits gamma and tau [Rhodomicrobium vannielii ATCC 17100] Length = 574 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 15/116 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++++E D + + L+ + +V F G LE+ L+ P+ LA KL+ WTG Sbjct: 459 SFEEIVEKVRAARDIMLQKALEERVELVKFGPGFLELRLLEGAPQSLAPELAKKLQAWTG 518 Query: 123 EDWEIRFSLGRC---------------CEYFEIDSDIKAVRTIFPTAQVVCIRTIP 163 E W + S R E +K++ FP A++ +R + Sbjct: 519 ERWIVSLSEERGLPPLGARMRDEKAQAKEEIRKHPAVKSILHHFPDAEITDVRKLD 574 >gi|167648530|ref|YP_001686193.1| DNA polymerase III subunits gamma and tau [Caulobacter sp. K31] gi|167350960|gb|ABZ73695.1| DNA polymerase III, subunits gamma and tau [Caulobacter sp. K31] Length = 632 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 +++L + D + +++F+ +SF G + P + L LK W Sbjct: 500 LASFDDVVKLIAEKRDIGLRLDVEQFVRPISFRPGAITFEPAPGAPGNLAGRLVRALKEW 559 Query: 121 TGEDWEIRFSLGRCCE---------------YFEIDSDIKAVRTIFPTAQVVCIRTI 162 TG+ W + G E + D + +V FP A++V +R I Sbjct: 560 TGQPWLVAAEGGGGAESLLERQKREDREEMDSIKADPFVASVLIAFPGAEIVEVRKI 616 >gi|217976468|ref|YP_002360615.1| DNA polymerase III, subunits gamma and tau [Methylocella silvestris BL2] gi|217501844|gb|ACK49253.1| DNA polymerase III, subunits gamma and tau [Methylocella silvestris BL2] Length = 628 Score = 127 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 15/119 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + ++ L K+ D +M L+R + +V F+ G +E + L KL+ W Sbjct: 483 LSSFADIVALAAKHRDIQMKLALERDVRLVRFQDGSIEFAPGPHASPQLAPMLMRKLQEW 542 Query: 121 TGEDWEIRFS--LGRCC-------------EYFEIDSDIKAVRTIFPTAQVVCIRTIPN 164 TG W + S GR E D ++ +FP A++V +RT Sbjct: 543 TGRRWLVAVSREAGRPSLKDEADAKAEAAMEGVRADPLVRRALELFPGAEIVAVRTAQE 601 >gi|227824061|ref|YP_002828034.1| DNA polymerase III subunits gamma and tau [Sinorhizobium fredii NGR234] gi|227343063|gb|ACP27281.1| DNA polymerase III, subunits gamma and tau [Sinorhizobium fredii NGR234] Length = 645 Score = 127 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 15/129 (11%) Query: 47 EKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIP 106 Q + P N + +LC KN D K+ +++ FL +V E GRL+V+ + P Sbjct: 487 PAQAPAAKAEPKVPVNSVGDIADLCAKNRDIKLKTLVRGFLRLVHIEPGRLDVNLSDDAP 546 Query: 107 EDFIENLATKLKNWTGEDWEIRFS-----------LGRCCEY----FEIDSDIKAVRTIF 151 + + LA KLK WTG W + +S R E D D+ A+ F Sbjct: 547 KTLLNELAVKLKEWTGIHWVVSYSREPGEPTLVEAEQRAQEQRVNDARQDPDVAAILARF 606 Query: 152 PTAQVVCIR 160 P A++ +R Sbjct: 607 PGARITDVR 615 >gi|254453888|ref|ZP_05067325.1| DNA polymerase III, gamma and tau subunit [Octadecabacter antarcticus 238] gi|198268294|gb|EDY92564.1| DNA polymerase III, gamma and tau subunit [Octadecabacter antarcticus 238] Length = 586 Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL ++ D K++ ++ + + +++ GR+E K P D + L ++L+ WTG Sbjct: 447 TFEHIVELIRRHRDVKLLVEVETGVRLAAYQPGRIEFVPAKGAPHDLAQRLGSRLQAWTG 506 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRT 161 W + E + ++AV FP A++ IRT Sbjct: 507 NRWAVTLVNEGGGETIAEVRDIETNALRDKAQAHPLVQAVLMKFPGARITDIRT 560 >gi|99080007|ref|YP_612161.1| DNA polymerase III subunits gamma and tau [Ruegeria sp. TM1040] gi|99036287|gb|ABF62899.1| DNA polymerase III subunits gamma and tau [Ruegeria sp. TM1040] Length = 608 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + +IEL + D K++ ++ + +VS++ GR+E + P+D + T L+NWTG Sbjct: 470 SFEHVIELIRHHRDVKLLVEVETGVRLVSYQPGRIEFTPAANAPQDLAARIGTALQNWTG 529 Query: 123 EDWEIRFSLGRCCEYFE---------------IDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + + ++AV FP A++ IRT L Sbjct: 530 SRWVVSIAPDGDAPTIAELRDAAQNALRAEASAHPLVQAVLQNFPKAKITKIRTQEEL 587 >gi|220924618|ref|YP_002499920.1| DNA polymerase III subunits gamma and tau [Methylobacterium nodulans ORS 2060] gi|219949225|gb|ACL59617.1| DNA polymerase III, subunits gamma and tau [Methylobacterium nodulans ORS 2060] Length = 605 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 15/115 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + ++ L + D + L+R +H+V FE GR+E + +LA L WTG Sbjct: 473 FEDVVALADARRDIGLKAALERDVHLVRFEDGRIEFRLAEGGRATLANDLARALDLWTGR 532 Query: 124 DWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIP 163 W + S ++AV FP AQ++ +R Sbjct: 533 RWVVALSKETGAPTLAARTRAEIESRHQGAAAHPLVQAVLRGFPGAQIIDVREKA 587 >gi|90419786|ref|ZP_01227695.1| DNA polymerase III, subunits gamma/tau [Aurantimonas manganoxydans SI85-9A1] gi|90335827|gb|EAS49575.1| DNA polymerase III, subunits gamma/tau [Aurantimonas manganoxydans SI85-9A1] Length = 639 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 15/134 (11%) Query: 42 EAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSF 101 ++ + + V+ +QL+ L E D M ++R+L +V GR+EV+ Sbjct: 470 QSSRPQTRPVVQEGQPEIQIASLEQLVALSESKRDSLMTVSIRRYLRLVKLVPGRIEVAL 529 Query: 102 LKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF---------------EIDSDIKA 146 E P I +L KL +WTG W + S G E D ++ A Sbjct: 530 TPEAPRTLITDLTRKLHDWTGRRWVVTISNGEAKPTLDEVATARRNTLLLDAESDPEVAA 589 Query: 147 VRTIFPTAQVVCIR 160 + FP A+VV +R Sbjct: 590 ILASFPGAKVVDVR 603 >gi|126733475|ref|ZP_01749222.1| DNA polymerase III, subunits gamma and tau [Roseobacter sp. CCS2] gi|126716341|gb|EBA13205.1| DNA polymerase III, subunits gamma and tau [Roseobacter sp. CCS2] Length = 612 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 19/160 (11%) Query: 19 SSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYK 78 ++ AIG P + P A + + V + A + ++EL + D K Sbjct: 435 TTTAIGNTPAPTHPG-----PGAPSASGAQTAVALQADALQHYARFEDVVELIRTHRDVK 489 Query: 79 MVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRC---- 134 ++ ++ L +VS++ GR+EV+ + D + L +L+ WTG W I + G Sbjct: 490 LLVEVETGLRLVSYQPGRIEVNPTPDAARDLVGRLGARLQAWTGNRWAISVAEGGGPTIA 549 Query: 135 ----------CEYFEIDSDIKAVRTIFPTAQVVCIRTIPN 164 + + +KAV IFP A++ IRT Sbjct: 550 ETRDAAENALLQEAQDHPLVKAVIAIFPKAKITEIRTEAE 589 >gi|163851288|ref|YP_001639331.1| DNA polymerase III, subunits gamma and tau [Methylobacterium extorquens PA1] gi|163662893|gb|ABY30260.1| DNA polymerase III, subunits gamma and tau [Methylobacterium extorquens PA1] Length = 628 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 39 PLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLE 98 P+ A A + ++ E D + L+R +H+V FE GR+E Sbjct: 462 PVTAAAPQPASRPAPVAPAGPRLKRFEDVVAQAEAARDIALKVALERDVHLVRFEEGRIE 521 Query: 99 VSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSD 143 + +LA L WTG W + S + + Sbjct: 522 FRLAPGGRQSLPTDLARALDAWTGRRWLVALSKEQGAPTLAENTRAAEETRHQNAAAHPL 581 Query: 144 IKAVRTIFPTAQVVCIRTIP 163 ++ V + FP AQ+V +R Sbjct: 582 VREVLSRFPGAQIVDVRDKA 601 >gi|188581065|ref|YP_001924510.1| DNA polymerase III, subunits gamma and tau [Methylobacterium populi BJ001] gi|179344563|gb|ACB79975.1| DNA polymerase III, subunits gamma and tau [Methylobacterium populi BJ001] Length = 623 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 15/115 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + ++ E D + L+R +H+V FE GR+E + +LA L WTG Sbjct: 481 FEDVVAQAEAARDIALKVALERDVHLVRFEEGRIEFRLAPGGRQSLANDLARALDAWTGR 540 Query: 124 DWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVVCIRTIP 163 W + S + + ++ V + FP AQ+V +R Sbjct: 541 RWVVAVSKEQGAPTLAENSRAAEETRHQNAAAHPLVREVLSRFPGAQIVDVRDKA 595 >gi|209886655|ref|YP_002290512.1| DNA polymerase III, subunits gamma and tau [Oligotropha carboxidovorans OM5] gi|209874851|gb|ACI94647.1| DNA polymerase III, subunits gamma and tau [Oligotropha carboxidovorans OM5] Length = 632 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 17/156 (10%) Query: 22 AIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVE 81 A +P +++E + + V + + + ++EL + D ++ Sbjct: 455 APAPRTMPPARAANETIARQQPR--PVESVAPQSAPVLRLSTYADIVELAREKRDVQLKT 512 Query: 82 MLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRC------- 134 L+ L +V E G+LE++ + + L KL+ WTG W + S Sbjct: 513 ALEADLRLVRMEDGKLEIALERSAARSVVNELQRKLEQWTGRRWAVIVSNEEGEPTLRAQ 572 Query: 135 --------CEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 E + D ++AV T+FP +VV +R + Sbjct: 573 ARERKDKLTEDVQADPRVQAVMTLFPGTEVVDVRRL 608 >gi|254487014|ref|ZP_05100219.1| DNA polymerase III, tau subunit [Roseobacter sp. GAI101] gi|214043883|gb|EEB84521.1| DNA polymerase III, tau subunit [Roseobacter sp. GAI101] Length = 578 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 17/155 (10%) Query: 26 NALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQR 85 N + P + + +++ A P + ++EL N D K++ ++ Sbjct: 404 NTNATASHHVQGSPQSGTTMAAVAPAIDQALARFP--SFEHVVELIRTNRDVKLLVEVEN 461 Query: 86 FLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF------- 138 L + +++ GR+E + P D + L T+L+ WTG W + + Sbjct: 462 TLRLAAYQPGRIEFTPTDAAPRDLAQRLGTRLQLWTGNRWAVSIVGDSDAKTIAEIRDAK 521 Query: 139 --------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 E ++AV FP A+++ IRT ++ Sbjct: 522 DNALKSAAESHPLMQAVMATFPGAKILSIRTPEDI 556 >gi|13474589|ref|NP_106158.1| DNA polymerase III subunits gamma and tau [Mesorhizobium loti MAFF303099] gi|14025343|dbj|BAB51944.1| DNA polymerase III tau [Mesorhizobium loti MAFF303099] Length = 604 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 16/120 (13%) Query: 60 PDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 P ++ L + D +++R + V FE GR++VS + P+ + +L TKL+ Sbjct: 464 PVRSLADIVALADAQRDIAFKVLVKRCIRPVRFEPGRIDVSLTDDAPKLLLNDLTTKLRA 523 Query: 120 WTGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPN 164 WTG +W + S + + D + A+ FP A+++ +R IP+ Sbjct: 524 WTGRNWLVSLSKEEGGQTLAEMESTKRENAFLDAKSDPTVAAILARFPGAKIIDVR-IPD 582 >gi|182677255|ref|YP_001831401.1| DNA polymerase III, subunits gamma and tau [Beijerinckia indica subsp. indica ATCC 9039] gi|182633138|gb|ACB93912.1| DNA polymerase III, subunits gamma and tau [Beijerinckia indica subsp. indica ATCC 9039] Length = 651 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 19/118 (16%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 L+ L + D ++ L+R + +V FE G +E + + L +L+ WTG Sbjct: 498 SFGALVALAGEKRDIQLKTALERDVRLVRFEEGTIEFALAPGASPQLAQTLMRRLQEWTG 557 Query: 123 EDWEIRF----SLGRCCEY---------------FEIDSDIKAVRTIFPTAQVVCIRT 161 W + S G E D ++ + FP AQ++ +R Sbjct: 558 TRWMVAIASETSGGAAALTLKEQAEKQAAAVRQGIEADPLVRKALSQFPGAQIIAVRP 615 >gi|240138441|ref|YP_002962913.1| DNA polymerase III, tau and gamma subunits [Methylobacterium extorquens AM1] gi|240008410|gb|ACS39636.1| DNA polymerase III, tau and gamma subunits [Methylobacterium extorquens AM1] Length = 626 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 15/140 (10%) Query: 39 PLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLE 98 P++ A A + ++ E D + L+R +H+V FE GR+E Sbjct: 460 PVSAAAPQPASRPAPVAPAGPRLGRFEDVVAQAEAARDIALKVALERDVHLVRFEEGRIE 519 Query: 99 VSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSD 143 + +LA L WTG W + S + + Sbjct: 520 FRLAPGGRQSLPTDLARALDAWTGRRWLVALSKEQGAPTLAENTRAAEETRHQNAAAHPL 579 Query: 144 IKAVRTIFPTAQVVCIRTIP 163 ++ V + FP AQ+V +R Sbjct: 580 VREVLSRFPGAQIVDVRDKA 599 >gi|329849471|ref|ZP_08264317.1| DNA polymerase III, subunits gamma and tau [Asticcacaulis biprosthecum C19] gi|328841382|gb|EGF90952.1| DNA polymerase III, subunits gamma and tau [Asticcacaulis biprosthecum C19] Length = 602 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 15/117 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 Q++ L + D + +++++ ++SF+ G + P D + L+ +L+ WTG Sbjct: 465 TFDQVLTLIAERRDIGLRTDVEQYVRLISFKPGAITFELAPRAPADLVRRLSMRLREWTG 524 Query: 123 EDWEIRFSLGRCCEY---------------FEIDSDIKAVRTIFPTAQVVCIRTIPN 164 E W I G E + D + + FP A++ +R P Sbjct: 525 ERWLIATEGGGGAESVYERDKRENDAARARLKADPFVAKLLETFPGAEITAVRARPQ 581 >gi|115526801|ref|YP_783712.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas palustris BisA53] gi|115520748|gb|ABJ08732.1| DNA polymerase III, subunits gamma and tau [Rhodopseudomonas palustris BisA53] Length = 629 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 15/132 (11%) Query: 46 TEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEI 105 T D +L+ L + D + L+ + +V E GR+E++ + Sbjct: 472 TPAPDPAPSAMPVLKIATFPELVALAAEKRDLMVRAALEADVRLVRIEDGRIELALERTA 531 Query: 106 PEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTI 150 I +L+ KL+ WTG W + S E D ++ V Sbjct: 532 SRTLINDLSRKLEQWTGRRWAVIVSNAEGQPTLRSQALQQQTARERAAESDPRVQEVLAR 591 Query: 151 FPTAQVVCIRTI 162 FP A+V+ +R + Sbjct: 592 FPGAKVIEVRRL 603 >gi|83855097|ref|ZP_00948627.1| DNA polymerase III subunits gamma and tau [Sulfitobacter sp. NAS-14.1] gi|83842940|gb|EAP82107.1| DNA polymerase III subunits gamma and tau [Sulfitobacter sp. NAS-14.1] Length = 582 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL N D K++ ++ + + +++ GR+E + P D + L T+L+ WTG Sbjct: 443 TFEHVVELIRSNRDVKLLVEVETSVRLAAYQPGRIEFTPTDSAPRDLAQRLGTRLQLWTG 502 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + + E ++AV FP A+++ IRT + Sbjct: 503 NRWAVTIVGDSSAKTIAEVRDAKENALKSQAENHPLMQAVMASFPGAKILSIRTPEEI 560 >gi|83941620|ref|ZP_00954082.1| DNA polymerase III, gamma and tau subunits [Sulfitobacter sp. EE-36] gi|83847440|gb|EAP85315.1| DNA polymerase III, gamma and tau subunits [Sulfitobacter sp. EE-36] Length = 582 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL N D K++ ++ + + +++ GR+E + P D + L T+L+ WTG Sbjct: 443 TFEHVVELIRSNRDVKLLVEVETSVRLAAYQPGRIEFTPTDSAPRDLAQRLGTRLQLWTG 502 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + + E ++AV FP A+++ IRT + Sbjct: 503 NRWAVTIVGDSSAKTIAEIRDAKENALKSQAENHPLMQAVMASFPGAKILSIRTPEEI 560 >gi|259415625|ref|ZP_05739546.1| DNA polymerase III subunits gamma and tau [Silicibacter sp. TrichCH4B] gi|259348855|gb|EEW60617.1| DNA polymerase III subunits gamma and tau [Silicibacter sp. TrichCH4B] Length = 625 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + +IEL K+ D K++ ++ + +VS++ GR+ + P+D + T L+NWTG Sbjct: 487 SFEHVIELIRKHRDVKLLVEVEGGVRLVSYQPGRITFTPAANAPQDLAARIGTALQNWTG 546 Query: 123 EDWEIRFSLGRCCEYFE---------------IDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + + ++AV FP A++ IRT L Sbjct: 547 SRWVVSIAPDGDAPTIAELRDAAENALRAEASAHPLVQAVLQNFPKAKITKIRTQEEL 604 >gi|260574231|ref|ZP_05842236.1| DNA polymerase III, subunits gamma and tau [Rhodobacter sp. SW2] gi|259023697|gb|EEW26988.1| DNA polymerase III, subunits gamma and tau [Rhodobacter sp. SW2] Length = 577 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 15/113 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 +Q+++L D K++ ++ L + + GR+E + P D LA +L+ WTG Sbjct: 439 FEQVVDLIRDKRDMKLLVEVETCLRLARYSPGRIEFEPTDDAPRDLAARLAQRLQGWTGA 498 Query: 124 DWEIRFSLGRCCEYFEID---------------SDIKAVRTIFPTAQVVCIRT 161 W + G D ++AV FP A++ IR+ Sbjct: 499 RWGVSIVSGGGAATLAEDRGKDWLAAKAEAMQNPLVQAVLAAFPNAEITAIRS 551 >gi|254560987|ref|YP_003068082.1| DNA polymerase III, tau and subunit gammas [Methylobacterium extorquens DM4] gi|254268265|emb|CAX24200.1| DNA polymerase III, tau and gamma subunits [Methylobacterium extorquens DM4] Length = 626 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 39 PLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLE 98 P+ A A + ++ E D + L+R +H+V FE GR+E Sbjct: 460 PVTAAAPQPASRPAPVAPAGPRLGRFEDVVAQAEAARDIALKVALERDVHLVRFEEGRIE 519 Query: 99 VSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSD 143 + +LA L WTG W + S + + Sbjct: 520 FRLAPGGRQSLPTDLARALDAWTGRRWLVALSKEQGAPTLAENTRAAEETRHQNAAAHPL 579 Query: 144 IKAVRTIFPTAQVVCIRTIP 163 ++ V + FP AQ+V +R Sbjct: 580 VREVLSRFPGAQIVDVRDKA 599 >gi|218530155|ref|YP_002420971.1| DNA polymerase III subunits gamma and tau [Methylobacterium chloromethanicum CM4] gi|218522458|gb|ACK83043.1| DNA polymerase III, subunits gamma and tau [Methylobacterium chloromethanicum CM4] Length = 626 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 39 PLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLE 98 P+ A A + ++ E D + L+R +H+V FE GR+E Sbjct: 460 PVTAAAPQPASRPAPVAPAGPRLGRFEDVVAQAEAARDIALKVALERDVHLVRFEEGRIE 519 Query: 99 VSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSD 143 + +LA L WTG W + S + + Sbjct: 520 FRLAPGGRQSLPTDLARALDAWTGRRWLVALSKEQGAPTLAENTRAAEETRHQNAAAHPL 579 Query: 144 IKAVRTIFPTAQVVCIRTIP 163 ++ V + FP AQ+V +R Sbjct: 580 VREVLSRFPGAQIVDVRDKA 599 >gi|323136736|ref|ZP_08071817.1| DNA polymerase III, subunits gamma and tau [Methylocystis sp. ATCC 49242] gi|322398053|gb|EFY00574.1| DNA polymerase III, subunits gamma and tau [Methylocystis sp. ATCC 49242] Length = 610 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 15/119 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 L+ L E+ D ++ L+ + +V FE GR+E D L KL+ W Sbjct: 472 IASFDALVALAEEKRDIRLKLALESDVRLVRFEHGRIEFELAPGGSRDLASALMQKLQAW 531 Query: 121 TGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPN 164 T E W + E D + V FP AQ+V +R+ Sbjct: 532 TNERWMVSIVAAGGAPTIKERRDAQERERRSGLEADPVVAGVLARFPGAQIVAVRSKDE 590 >gi|315497912|ref|YP_004086716.1| DNA polymerase iii, subunits gamma and tau [Asticcacaulis excentricus CB 48] gi|315415924|gb|ADU12565.1| DNA polymerase III, subunits gamma and tau [Asticcacaulis excentricus CB 48] Length = 603 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 15/125 (12%) Query: 54 RLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENL 113 N ++ L + D + ++R++ ++SF G + P D + L Sbjct: 454 NAQPQIQLNTFDDVLALIAEKRDIGLRVDVERYVKLISFRQGAITFEPAPHTPIDLVRKL 513 Query: 114 ATKLKNWTGEDWEIRFSLGRCCEY---------------FEIDSDIKAVRTIFPTAQVVC 158 + +LK WTG+ W I G E D I + T FP +++ Sbjct: 514 SARLKEWTGQRWLIATEGGGGAETYREREIREKAEALQRLRNDPFISGLMTAFPGVEILS 573 Query: 159 IRTIP 163 R P Sbjct: 574 FRPKP 578 >gi|163744802|ref|ZP_02152162.1| DNA polymerase III subunits gamma and tau [Oceanibulbus indolifex HEL-45] gi|161381620|gb|EDQ06029.1| DNA polymerase III subunits gamma and tau [Oceanibulbus indolifex HEL-45] Length = 583 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 17/144 (11%) Query: 37 CFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGR 96 P + T L+ A P + +IEL N D K++ ++ + + +++ GR Sbjct: 420 SNPGPQGQTTALAQDLDAALARFP--TFEHVIELIRVNRDVKLLVEVETCVQLAAYQPGR 477 Query: 97 LEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF---------------EID 141 +E + P D + L KL+ WTG W + E + Sbjct: 478 IEFVPTDDAPRDLAQRLGQKLQLWTGNRWAVSLVNEGGAETIAQIRDAWELALKKQAQEH 537 Query: 142 SDIKAVRTIFPTAQVVCIRTIPNL 165 ++AV FP A++ IRT ++ Sbjct: 538 PMMQAVLAQFPKARITAIRTPEDI 561 >gi|84500405|ref|ZP_00998654.1| DNA polymerase III subunits gamma and tau [Oceanicola batsensis HTCC2597] gi|84391358|gb|EAQ03690.1| DNA polymerase III subunits gamma and tau [Oceanicola batsensis HTCC2597] Length = 581 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 15/113 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++EL N D K++ ++ + +V + GR+E + P D + L +L+ WTG Sbjct: 442 SFDHVVELIRANRDVKLLVEVETCVRLVGYRPGRIEFVPTGDAPRDLAQKLGARLQGWTG 501 Query: 123 EDWEIRFSLGRCCEYFE---------------IDSDIKAVRTIFPTAQVVCIR 160 W + + E ++AV FP A + IR Sbjct: 502 NRWAVIVANEGGGETIAETRDAKALALREEAGAHPLVQAVLAAFPKAAITAIR 554 >gi|296447822|ref|ZP_06889735.1| DNA polymerase III, subunits gamma and tau [Methylosinus trichosporium OB3b] gi|296254681|gb|EFH01795.1| DNA polymerase III, subunits gamma and tau [Methylosinus trichosporium OB3b] Length = 601 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 15/137 (10%) Query: 39 PLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLE 98 P + SA L+ + D ++ L+ + +V FE GR+E Sbjct: 440 PSPQGAARSLAAPRPEASAGVAFADFAALVAFVGEKRDMQLKMALETDVRLVRFEQGRIE 499 Query: 99 VSFLKEIPEDFIENLATKLKNWTGEDWEIRF--SLGRCCEYF-------------EIDSD 143 + L +L+ WTG W + S G E D Sbjct: 500 FELAPGGSTRLPQQLMQRLQEWTGTRWLVALAPSGGAPTLSEQAATRKQEERSGVESDPL 559 Query: 144 IKAVRTIFPTAQVVCIR 160 + A+ FP A++V +R Sbjct: 560 VAAIMARFPGAEIVAVR 576 >gi|148258531|ref|YP_001243116.1| DNA polymerase III subunits gamma and tau [Bradyrhizobium sp. BTAi1] gi|146410704|gb|ABQ39210.1| Putative DNA polymerase III (gamma and tau subunits) [Bradyrhizobium sp. BTAi1] Length = 613 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 15/135 (11%) Query: 44 GITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLK 103 ++ + + + + ++L+ L KN D L+ + +V FE GRLE++ + Sbjct: 456 AMSSQPSPVQQNQSALRLASFQELVALAGKNRDLITKSALEMDVRLVRFEDGRLEIALER 515 Query: 104 EIPEDFIENLATKLKNWTGEDWEIRFSL--GRCCEYF-------------EIDSDIKAVR 148 + +L KL++WTG W + S G+ E D ++ + Sbjct: 516 TAQRSLVSDLGRKLEDWTGRRWTVIVSNEAGQPTLREQNLRAKSEREAAAEADPRVQEIL 575 Query: 149 TIFPTAQVVCIRTIP 163 FP +V+ +R + Sbjct: 576 ARFPGTKVIEVRRLA 590 >gi|327190225|gb|EGE57328.1| DNA polymerase III, tau subunit protein (DNA-directed DNA polymerase) [Rhizobium etli CNPAF512] Length = 178 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 27/150 (18%) Query: 26 NALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQR 85 N P+ I E P P N +++L + D K+ +++ Sbjct: 7 NPEPQAIGRVETKPAEAPK------------PLVPVNTIGDIVDLAAEKRDVKLKALVRN 54 Query: 86 FLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF------- 138 F+ V E GRL+V+ + P + LA KLK WTG W + S Sbjct: 55 FVRPVRIEPGRLDVNLTEGAPGTLLNELAVKLKEWTGIHWIVSTSREEGGPTMVEAEAKA 114 Query: 139 --------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ FP A+++ +R Sbjct: 115 QQQRVSDARQDPDVAAILAQFPGAKIIDVR 144 >gi|254500517|ref|ZP_05112668.1| DNA polymerase III, subunits gamma and tau, putative [Labrenzia alexandrii DFL-11] gi|222436588|gb|EEE43267.1| DNA polymerase III, subunits gamma and tau, putative [Labrenzia alexandrii DFL-11] Length = 654 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 35 DECFPLAEAGITEKQDVLN-RLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFE 93 + P + + + + + L + D M +QR + +V FE Sbjct: 482 PQTAPAQQKSPQNAPEPEPAQPQSAYNLKNLHDCVALASEKRDIPMKVAIQRQMRLVKFE 541 Query: 94 LGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFS--LGRCCEYFEI----------- 140 G++E+ + P D KL WTG+ W + S GR + E Sbjct: 542 PGKIEIQPTDDAPADIAGEFGRKLTEWTGQRWFVVVSRTQGRPTIHEEQEANQQQLLSDA 601 Query: 141 --DSDIKAVRTIFPTAQVVCIR 160 + A+ FP A+V+ ++ Sbjct: 602 KSHPTVAALLAQFPGAKVIDVK 623 >gi|209965591|ref|YP_002298506.1| DNA polymerase III subunits gamma and tau [Rhodospirillum centenum SW] gi|209959057|gb|ACI99693.1| DNA polymerase III, subunits gamma and tau, putative [Rhodospirillum centenum SW] Length = 640 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 15/113 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 ++ L + + ++ L+ +H+V FE G +E + P + + L WTG Sbjct: 474 FADVVALFNERREARIAADLETLVHLVRFEPGLIEFRPEPQAPHNLPGRVGQLLTEWTGR 533 Query: 124 DWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRT 161 W + S G+ E ++AV FP A++ IR Sbjct: 534 RWVVSVSGAPGQPTLREKARAAEAEVRRQVEAHPLVQAVLLAFPGARIETIRD 586 >gi|319779807|ref|YP_004139283.1| DNA polymerase III, subunits gamma and tau [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165695|gb|ADV09233.1| DNA polymerase III, subunits gamma and tau [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 605 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 18/151 (11%) Query: 29 PRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLH 88 + + E P A + + V SA P +I L + D +++ + Sbjct: 436 AQTMRLVEASPAPVAYVAPPEPVTEAQSA--PLKSLADIIALADAQRDIAFKVLVKSCIR 493 Query: 89 VVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF---------- 138 V E GR++V + P+ + +L TKL+ WTG W + S + Sbjct: 494 FVRIEPGRIDVGLTSDAPKMLLNDLTTKLRAWTGRSWLVSLSKEEGGQTLAEMESAKRET 553 Query: 139 -----EIDSDIKAVRTIFPTAQVVCIRTIPN 164 + D + A+ FP A+++ +R IP+ Sbjct: 554 AFLDAKSDPTVAAILARFPGAKIIDVR-IPD 583 >gi|114770074|ref|ZP_01447612.1| DNA polymerase III subunits gamma and tau [alpha proteobacterium HTCC2255] gi|114548911|gb|EAU51794.1| DNA polymerase III subunits gamma and tau [alpha proteobacterium HTCC2255] Length = 594 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 31/192 (16%) Query: 5 SWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQ--------------- 49 S ++ KK+ + G N S+ P + Sbjct: 380 SPEELIKKIQNDPNPPVSSGHNGPSVTTQSENKAPKQQNIQVPSNLSGTKLSSEGIMSIV 439 Query: 50 -DVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPED 108 L + Q++EL + D K++ ++ ++ VV + GRLE KE P+D Sbjct: 440 APQLQEEEPLVKYSEFNQVLELIRSHRDMKLLYDVETYVRVVKYLPGRLEFEPTKEAPKD 499 Query: 109 FIENLATKLKNWTGEDWEIRFSLGRCCEYFE---------------IDSDIKAVRTIFPT 153 + L+ KL++WT W I ++A FP Sbjct: 500 LAQRLSQKLQDWTKSRWAITLVNEGGAATIAEQKLEARDDLHAKVSTHPLVRATLLAFPN 559 Query: 154 AQVVCIRTIPNL 165 +++ ++++ ++ Sbjct: 560 SEIRNVKSLKDM 571 >gi|90426319|ref|YP_534689.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas palustris BisB18] gi|90108333|gb|ABD90370.1| DNA polymerase III, subunits gamma and tau [Rhodopseudomonas palustris BisB18] Length = 618 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 N +L+ L + D L+ + +V E GRLE++ + I +L+ KL+ W Sbjct: 474 INSFPELVALAAEKRDVMTRVALEADVRLVRIEDGRLELAMERSAARTLINDLSRKLEQW 533 Query: 121 TGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIP 163 TG W + S E D ++ V FP A+V+ +R + Sbjct: 534 TGRRWTVIVSNEEGQPTLRSQALAQQSERERAAEADPRVQEVLARFPGAKVLEVRRLA 591 >gi|254474501|ref|ZP_05087887.1| DNA polymerase III, tau subunit [Ruegeria sp. R11] gi|214028744|gb|EEB69579.1| DNA polymerase III, tau subunit [Ruegeria sp. R11] Length = 607 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL D ++E ++ +L +VS++ GR+ + + P+D L +L+NWT Sbjct: 468 SFEHVLELIRVKRDGLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQNWTH 527 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W I + E ++AV FP A++ IRT +L Sbjct: 528 ARWVISLANEGGGETITERENAAENALRAEASKHPIVQAVLENFPKAKITKIRTAEDL 585 >gi|260427427|ref|ZP_05781406.1| DNA polymerase III subunit tau [Citreicella sp. SE45] gi|260421919|gb|EEX15170.1| DNA polymerase III subunit tau [Citreicella sp. SE45] Length = 588 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + +IEL N D ++ ++R + + +++ GR+E + P D + L + L+ WTG Sbjct: 449 SFEHVIELIRANRDGLLLAQVERHVRLAAYQPGRIEFTPTDNAPADLAQKLGSALQRWTG 508 Query: 123 EDWEIRFSLG--RCCEYFEI-------------DSDIKAVRTIFPTAQVVCIRT 161 W + G Y + ++A FP+A++V IRT Sbjct: 509 NRWGVSVVNGCETPTVYEKNHAAELAMKAEATVHPLVQAAIAAFPSAEIVEIRT 562 >gi|56698372|ref|YP_168745.1| DNA polymerase III subunits gamma and tau [Ruegeria pomeroyi DSS-3] gi|56680109|gb|AAV96775.1| DNA polymerase III, gamma and tau subunits [Ruegeria pomeroyi DSS-3] Length = 583 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + L+EL N D K++ ++ L +VS++ GR+E + P D + L + L+ WTG Sbjct: 444 TFEHLVELIRANRDGKLLADIEMDLRLVSYQPGRIEFQPTERAPTDLAQRLGSALQRWTG 503 Query: 123 EDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVVCIRT 161 W + E ++AV FP A++ I T Sbjct: 504 NRWAVSVVAQGGGKTIDEIRNAEKYALEEKAREHPLVQAVLAQFPKARITHIET 557 >gi|260432378|ref|ZP_05786349.1| DNA polymerase III subunits gamma and tau [Silicibacter lacuscaerulensis ITI-1157] gi|260416206|gb|EEX09465.1| DNA polymerase III subunits gamma and tau [Silicibacter lacuscaerulensis ITI-1157] Length = 584 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL N D K++ ++ + +VS++ GR+E + ++ P D L + L+ WTG Sbjct: 445 TFEHVVELIRANRDVKLLVEVENGVRLVSYQPGRIEFTPTEKAPTDLAARLGSALQRWTG 504 Query: 123 EDWEIRFSLGRCCEYFEI---------------DSDIKAVRTIFPTAQVVCIRT 161 W + ++AV T FP A++ I T Sbjct: 505 NRWAVSIVSDGDAPTIAELRDAAELALKAKAEEHPLVQAVLTQFPKARITRIET 558 >gi|254438399|ref|ZP_05051893.1| DNA polymerase III, subunits gamma and tau, putative [Octadecabacter antarcticus 307] gi|198253845|gb|EDY78159.1| DNA polymerase III, subunits gamma and tau, putative [Octadecabacter antarcticus 307] Length = 590 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 15/123 (12%) Query: 54 RLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENL 113 A ++EL ++ D K++ ++ + + +++ GR+E K P D + L Sbjct: 442 EDEALVHYPTFDHIVELIRRHRDVKLLVEVETGMRLAAYQPGRIEFVPAKGAPSDLAQRL 501 Query: 114 ATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVVC 158 ++L+ WTG W + + + ++AV FP A++ Sbjct: 502 GSRLQAWTGNRWAVTLVNEGGAATIAEIRDTENNALRDKAKAHPLVQAVLMKFPGARITD 561 Query: 159 IRT 161 IRT Sbjct: 562 IRT 564 >gi|114763364|ref|ZP_01442771.1| DNA polymerase III subunits gamma and tau [Pelagibaca bermudensis HTCC2601] gi|114543902|gb|EAU46913.1| DNA polymerase III subunits gamma and tau [Roseovarius sp. HTCC2601] Length = 588 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL N D ++ ++R + + +++ GR+E + D + L + L+ WTG Sbjct: 449 TFEHVVELIRANRDMTLLMEVERCVRLAAYQPGRIEFTPTNNARGDLAQRLGSALQRWTG 508 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRT 161 W + G ++A FP A++V IRT Sbjct: 509 NRWGVSLVNGCETATIWEQTHAAELAMKAEAAEHPLVQAALAAFPKAEIVEIRT 562 >gi|254470770|ref|ZP_05084173.1| DNA polymerase III, tau subunit protein [Pseudovibrio sp. JE062] gi|211959912|gb|EEA95109.1| DNA polymerase III, tau subunit protein [Pseudovibrio sp. JE062] Length = 640 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 16 LNVSSFAIGENALPRNISSDECFPLAEA-----GITEKQDVLNRLSACTPDNYTKQLIEL 70 + SS G + P+ + P+A+A + ++ ++ +L Sbjct: 445 PSASSAPSGGGSAPQLRAVAGGQPMAQAVGAAPQTAPQMRQAEEINERIAIRSWAEVAQL 504 Query: 71 CEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFS 130 + D + ++R L +V+F+ GR+EV + D L KL WTG W + S Sbjct: 505 AGRMKDIPVKVSVERALRLVNFQPGRIEVQPTEIATPDAAGELGRKLTEWTGRRWIVAVS 564 Query: 131 --LGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIRTIPN 164 GR + E D ++ + + FP A+VV +R + Sbjct: 565 REQGRPTLHEEKEANQRQLVSDAHSDPEVVKLISAFPGAKVVDVRILKQ 613 >gi|154250711|ref|YP_001411535.1| DNA polymerase III subunits gamma and tau [Parvibaculum lavamentivorans DS-1] gi|154154661|gb|ABS61878.1| DNA polymerase III, subunits gamma and tau [Parvibaculum lavamentivorans DS-1] Length = 623 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 17/133 (12%) Query: 46 TEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEI 105 E + S + ++ L K D ++ L+ + +VSFE GR+E+S L+ Sbjct: 462 AEATPAVAATSPAAVVRTFEDVVALVSKQRDIRLKHALEAGVRLVSFEPGRIEISLLEGT 521 Query: 106 PEDFIENLATKLKNWTGEDWEIRFSLG-----------------RCCEYFEIDSDIKAVR 148 + L+ L TG W + + G E D +KA Sbjct: 522 QSTIVSELSDTLSKATGTRWFVSVARGPAPATPTLREQAQTREEAARETARADPLVKAAL 581 Query: 149 TIFPTAQVVCIRT 161 FP A++V +R Sbjct: 582 AAFPGAEIVNVRE 594 >gi|300024235|ref|YP_003756846.1| DNA polymerase III subunits gamma and tau [Hyphomicrobium denitrificans ATCC 51888] gi|299526056|gb|ADJ24525.1| DNA polymerase III, subunits gamma and tau [Hyphomicrobium denitrificans ATCC 51888] Length = 617 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 48 KQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL--GRLEVSFLKEI 105 +Q L+ S ++ L + D K+ L+ + +V F+ G ++V L + Sbjct: 471 EQTSLSSASRLPDPRSFVDVVTLVGEKRDVKLKMHLENDVSLVKFDAVAGSIDVFLLPDA 530 Query: 106 PEDFIENLATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTI 150 P + +L KL WTG W + S E + ++AV Sbjct: 531 PPELANDLREKLNLWTGRRWVVVLSKDAGQRPIGVVRREREAAELEQLKQHPAMRAVLQA 590 Query: 151 FPTAQVVCIRTIP 163 FP A++ +R +P Sbjct: 591 FPDAKIAEVRRLP 603 >gi|83951302|ref|ZP_00960034.1| DNA polymerase III subunits gamma and tau [Roseovarius nubinhibens ISM] gi|83836308|gb|EAP75605.1| DNA polymerase III subunits gamma and tau [Roseovarius nubinhibens ISM] Length = 620 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + +IEL N D K++ ++ L + ++ GR+E + ++ D + L + L+ WTG Sbjct: 481 SFEHVIELIRANRDVKLLVEVENCLRLAAYRPGRIEFAPTEDAAPDLAQKLGSALQRWTG 540 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRT 161 W + E + + ++AV FP+A+++ IRT Sbjct: 541 NRWAVTVVAEGGDETIAEKRDAARLALEAEAKKHALVQAVIANFPSAKILDIRT 594 >gi|260462019|ref|ZP_05810264.1| DNA polymerase III, subunits gamma and tau [Mesorhizobium opportunistum WSM2075] gi|259032266|gb|EEW33532.1| DNA polymerase III, subunits gamma and tau [Mesorhizobium opportunistum WSM2075] Length = 597 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 16/119 (13%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 ++ L + D +++R + +V E GR++VS + P+ + +L KL+ W Sbjct: 458 LKSLADIVALADAQRDIAFKVLVKRCIRLVRIEPGRIDVSLTDDAPKMLLNDLTMKLRAW 517 Query: 121 TGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPN 164 TG +W + S + + D + A+ FP A+++ +R IP+ Sbjct: 518 TGRNWLVSLSKEEGGQTLAEMESTRRENAFLDAKSDPAVAAILARFPGAKIIDVR-IPD 575 >gi|146337878|ref|YP_001202926.1| DNA polymerase III subunits gamma and tau [Bradyrhizobium sp. ORS278] gi|146190684|emb|CAL74688.1| Putative DNA polymerase III (gamma and tau subunits) [Bradyrhizobium sp. ORS278] Length = 615 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 15/116 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++L+ L KN D L+ + +V FE GRLE++ + + +L KL++WTG Sbjct: 475 SFQELVALAAKNRDLITKSALEMDVRLVRFEDGRLEIALERTAQRALVSDLGRKLEDWTG 534 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIP 163 W + S + E D ++ + FP +V+ +R + Sbjct: 535 RRWTVIVSNEQGQATLREQNLRAKSEREAAAEADPRVQEILARFPGTKVIEVRRLA 590 >gi|92116083|ref|YP_575812.1| DNA polymerase III subunits gamma and tau [Nitrobacter hamburgensis X14] gi|91798977|gb|ABE61352.1| DNA polymerase III, subunits gamma and tau [Nitrobacter hamburgensis X14] Length = 615 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 19/152 (12%) Query: 27 ALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRF 86 + PR + P A + + + + +L+ L + D + L+ Sbjct: 446 SAPRAAAEPASRPQAITPMVDPTGAVPAVR----LESFTELVALAGEKRDLIIKAALEAD 501 Query: 87 LHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSL--GRCCE-------- 136 + +V E GRLEV+ + + LA KL+ WTG W + S G+ Sbjct: 502 MRLVRMEDGRLEVALERSAARTLVNELARKLEQWTGRRWTVIVSNEPGQPTLRSQALLQK 561 Query: 137 -----YFEIDSDIKAVRTIFPTAQVVCIRTIP 163 E D +K V FP A+VV +R + Sbjct: 562 NERERAAEADPRVKDVLARFPGAKVVEVRKLA 593 >gi|254456249|ref|ZP_05069678.1| DNA-directed DNA polymerase gamma/tau subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207083251|gb|EDZ60677.1| DNA-directed DNA polymerase gamma/tau subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 556 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 23/182 (12%) Query: 1 LHAISWKKRKKKLDALNVSSFAIGENAL-----PRNISSDECFPLAEAGITEKQDVLNRL 55 L +I K+ KK + I + + ++ +A+ K DV + Sbjct: 366 LSSIKLKQDTKKEQTSHNIDDRIQKKKKENEFDDNSRVINQIKNVAQEEKH-KPDVKQEV 424 Query: 56 SACTP--DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENL 113 A N + L+++C + + K+ L++ +++V FE R+E+SF + +DF+++L Sbjct: 425 EAIDKNLINSFEDLLDICTQKKEIKLKYELEKNVNLVKFERNRIEISFNDNLDKDFVKDL 484 Query: 114 ATKLKNWTGEDWEIRFSLGRCCEYFE------IDSDIKA---------VRTIFPTAQVVC 158 ++KL WT E W I FS + + D I V FP A+++ Sbjct: 485 SSKLFEWTSERWIITFSKSKGEMSIKEKQKNRKDKLINEVKSSETYQMVMEKFPDAELID 544 Query: 159 IR 160 ++ Sbjct: 545 VK 546 >gi|144898666|emb|CAM75530.1| DNA-directed DNA polymerase [Magnetospirillum gryphiswaldense MSR-1] Length = 586 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 16/116 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 +++ L + + + L+ ++ V FE GR+E K P+D ++ L WTG Sbjct: 448 SFAEVVALFSEKREGVLAVHLRNQVNPVKFEAGRIEFRPHKSAPQDLAPRVSRLLSEWTG 507 Query: 123 EDWEIR----------------FSLGRCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 W + + + E ++AV FP A + +R + Sbjct: 508 RRWTVTVNLTDPADPTLSEQEALAEHKRREDAANHPLVRAVLDAFPGAAIEIVRDL 563 >gi|254421036|ref|ZP_05034760.1| DNA polymerase III, subunits gamma and tau, putative [Brevundimonas sp. BAL3] gi|196187213|gb|EDX82189.1| DNA polymerase III, subunits gamma and tau, putative [Brevundimonas sp. BAL3] Length = 623 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 15/116 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 +Q++ L + + + ++RF+ VSF+ G + ++ P + LA +L+ WTG Sbjct: 490 TFEQVVALIGEKREVGLQMDVERFVKPVSFKPGAIVYESVEGAPVELARRLAGRLREWTG 549 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIP 163 W I + E E D IKAV FP A++ I+TI Sbjct: 550 RTWLIAANGQGGGETLIERQKKERAAEREKVEADPFIKAVLLAFPGAKLGEIKTIA 605 >gi|27383227|ref|NP_774756.1| DNA polymerase III subunits gamma and tau [Bradyrhizobium japonicum USDA 110] gi|27356401|dbj|BAC53381.1| DNA polymerase III tau subunit [Bradyrhizobium japonicum USDA 110] Length = 613 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 15/118 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 QL+ L + D L+ + +V FE GRLEV+ I LA K + W Sbjct: 469 ITSFTQLVALAGQKRDIMTKAALEADMRLVRFEEGRLEVALEPNASRTMITELARKFELW 528 Query: 121 TGEDWEIRFSLGRC---------------CEYFEIDSDIKAVRTIFPTAQVVCIRTIP 163 TG W + S + E D ++ V + FP ++VV +R + Sbjct: 529 TGRRWTVIVSNEQGQPTLRSVNQAAKQEHARTAEADPRVQEVLSRFPGSKVVEVRRLA 586 >gi|319408027|emb|CBI81681.1| DNA polymerase III gamma and tau subunit [Bartonella schoenbuchensis R1] Length = 642 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 16/165 (9%) Query: 12 KLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNR-LSACTPDNYTKQLIEL 70 K+ + +L + + + Q N ++ L Sbjct: 452 KIQTPENTDSFKTTESLDNIQTIESSNNIVHLPYASSQPETETTEQKFLNINSLHDIVNL 511 Query: 71 CEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF- 129 E++ + +++ F+H VSFE G + + + P ++ L WT + W I F Sbjct: 512 AEQHRETHFKLLIKEFVHPVSFEPGHITLRLAENAPRSLARDIKKMLHQWTEKKWTITFV 571 Query: 130 -SLGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 G E D DI + FP A++V IR Sbjct: 572 TEGGGPTLQEESAAAQRALFSDVETDPDIATILNHFPGAKIVDIR 616 >gi|126463125|ref|YP_001044239.1| DNA polymerase III subunits gamma and tau [Rhodobacter sphaeroides ATCC 17029] gi|126104789|gb|ABN77467.1| DNA polymerase III, subunits gamma and tau [Rhodobacter sphaeroides ATCC 17029] Length = 580 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%) Query: 60 PDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 P +Q++EL + D K++ ++ + +V F GR+E + D L+ +L+ Sbjct: 441 PCQSFEQMVELIRQKRDMKLLYEVETGVRLVRFAPGRIEFEPAPDAAPDLAARLSQRLQG 500 Query: 120 WTGEDWEIR-FSLGR-CCEYFEID-------------SDIKAVRTIFPTAQVVCIRTIPN 164 WTG W I S G E D ++AV FP A++ IR + Sbjct: 501 WTGGRWGISVVSGGGAPTLAEERDKGRLEEEARALENPLVQAVMAAFPGARIAEIRRLEE 560 >gi|77464283|ref|YP_353787.1| DNA polymerase III subunits gamma and tau [Rhodobacter sphaeroides 2.4.1] gi|77388701|gb|ABA79886.1| DNA polymerase III tau and gamma subunits [Rhodobacter sphaeroides 2.4.1] Length = 582 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%) Query: 60 PDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 P +Q++EL + D K++ ++ + +V F GR+E + D L+ +L+ Sbjct: 443 PCQSFEQMVELIRQKRDMKLLYEVETGVRLVRFAPGRIEFEPAPDAAPDLAARLSQRLQG 502 Query: 120 WTGEDWEIR-FSLGR-CCEYFEID-------------SDIKAVRTIFPTAQVVCIRTIPN 164 WTG W I S G E D ++AV FP A++ IR + Sbjct: 503 WTGGRWGISVVSGGGAPTLAEERDKGRLEEEARALENPLVQAVMAAFPGARIAEIRRLEE 562 >gi|255263195|ref|ZP_05342537.1| DNA polymerase III subunits gamma and tau [Thalassiobium sp. R2A62] gi|255105530|gb|EET48204.1| DNA polymerase III subunits gamma and tau [Thalassiobium sp. R2A62] Length = 585 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 15/121 (12%) Query: 56 SACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLAT 115 A + ++EL + D K++ ++ + +VS+ GR+E + P+D + L + Sbjct: 439 EALSRFVTFDHVVELIRTHRDVKLLVEVETGVKLVSYSPGRIEFAPSDAAPQDLAQRLGS 498 Query: 116 KLKNWTGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 +L+ +TG W I ++AV T FP +++ IR Sbjct: 499 RLQAYTGNRWAISVVADGGAPTIADLRDEADNALKAEAAAHPMVQAVLTAFPKSKITEIR 558 Query: 161 T 161 T Sbjct: 559 T 559 >gi|154246111|ref|YP_001417069.1| DNA polymerase III, subunits gamma and tau [Xanthobacter autotrophicus Py2] gi|154160196|gb|ABS67412.1| DNA polymerase III, subunits gamma and tau [Xanthobacter autotrophicus Py2] Length = 622 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 15/116 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + + D + ++ L V E GR+EV+ + P I++L+ KL +W Sbjct: 477 LASLADVAQYVAAKRDLALKHAVETSLRPVHVEEGRIEVALVPGAPASVIQDLSRKLSDW 536 Query: 121 TGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVVCIRT 161 TG W + S E + + AV FP A+VV +RT Sbjct: 537 TGRRWLVSVSSQAGGPTLAEENAAVKAEREEGIKAHPLVAAVLARFPGAEVVDVRT 592 >gi|84685226|ref|ZP_01013125.1| DNA polymerase III subunits gamma and tau [Maritimibacter alkaliphilus HTCC2654] gi|84666958|gb|EAQ13429.1| DNA polymerase III subunits gamma and tau [Rhodobacterales bacterium HTCC2654] Length = 576 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++ L N D K++ ++ + + +++ GR+E + + P D LA +L+ WTG Sbjct: 437 TFESVVRLIRANRDVKLLVEVETCIRLAAYQPGRIEFTPTPDAPRDLAARLAQRLQGWTG 496 Query: 123 EDWEIRFSLGRCCEYFE---------------IDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + ++AV FP A++ IRT L Sbjct: 497 ARWGVSLVNDAEVPTIAETRDAEENEIKAKATEHPLVQAVLAAFPKARITEIRTPDEL 554 >gi|163757647|ref|ZP_02164736.1| DNA polymerase III subunits gamma and tau [Hoeflea phototrophica DFL-43] gi|162285149|gb|EDQ35431.1| DNA polymerase III subunits gamma and tau [Hoeflea phototrophica DFL-43] Length = 639 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 15/154 (9%) Query: 22 AIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVE 81 A+GE +P+ + LA + + ++ L EK+ D M Sbjct: 453 AVGERHMPQTGNGQPSMRLAHSAEPSVAPPAAEPVEQVAVASLEDMVVLAEKHRDIAMKV 512 Query: 82 MLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF--- 138 ++ + +V E RLE+S + L KLK+WTG +W + S Sbjct: 513 QIRTGVRLVRIEQTRLEISLAPDASPSLPGELVKKLKDWTGANWSVALSREEGAPTITER 572 Query: 139 ------------EIDSDIKAVRTIFPTAQVVCIR 160 D D+ A+ + FP +++ +R Sbjct: 573 EAAKRDALVSDARQDPDVAAILSKFPGSKITDVR 606 >gi|254462224|ref|ZP_05075640.1| DNA polymerase III, gamma and tau subunit [Rhodobacterales bacterium HTCC2083] gi|206678813|gb|EDZ43300.1| DNA polymerase III, gamma and tau subunit [Rhodobacteraceae bacterium HTCC2083] Length = 583 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 17/160 (10%) Query: 21 FAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMV 80 + G ++ S + G Q + P +++L N D K++ Sbjct: 404 VSAGATSVANAQSRMSSSSGSSGGAATAQQLDADALERFP--TFDHVVDLIRANRDVKLL 461 Query: 81 EMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF-- 138 ++ + + +++ GR+E + P D + L KL+ WTG W + E Sbjct: 462 VDVEGGIRLANYQPGRIEFVAHPKAPNDLAQRLGQKLQLWTGNRWAVTLVNQGGRETIAE 521 Query: 139 -------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 ++AV FP+A+++ I+T + Sbjct: 522 KRDAVDIALKEEAASHPLLQAVFEAFPSARIIDIKTPAEI 561 >gi|85717152|ref|ZP_01048111.1| DNA polymerase III subunits gamma and tau [Nitrobacter sp. Nb-311A] gi|85696043|gb|EAQ33942.1| DNA polymerase III subunits gamma and tau [Nitrobacter sp. Nb-311A] Length = 827 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 15/116 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 +L+ L + D + L+ + +V E GRLEV+ + + +LA KL+ W Sbjct: 689 IESFTELVALAGEKRDLIIKAALEADMRLVRMEDGRLEVALERSAARTLVNDLARKLEQW 748 Query: 121 TGEDWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRT 161 TG W + S G+ E D ++ V FP A+VV +R Sbjct: 749 TGRRWTVIVSNEPGQPTLRSQALLQKSERERAAEADPRVQDVLARFPGAKVVEVRK 804 >gi|110678389|ref|YP_681396.1| DNA polymerase III subunits gamma and tau [Roseobacter denitrificans OCh 114] gi|109454505|gb|ABG30710.1| DNA polymerase III, tau subunit [Roseobacter denitrificans OCh 114] Length = 582 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++EL N D K++ ++ + + ++ GR+E + + P D + L +L+ WTG Sbjct: 443 SFDHVVELIRANRDVKLLVEVEGCVRLAQYQPGRIEFAPTENAPADLAQRLGQRLQLWTG 502 Query: 123 EDWEIRFSLG--RCCEYFEID-------------SDIKAVRTIFPTAQVVCIRT 161 W + + D ++AV T FP A++ I+T Sbjct: 503 NRWAVTIVNDASAPTIAEKRDAAELDLQSKALEHPLMQAVLTQFPKARITSIKT 556 >gi|163737243|ref|ZP_02144661.1| DNA polymerase III, subunits gamma and tau [Phaeobacter gallaeciensis BS107] gi|161389847|gb|EDQ14198.1| DNA polymerase III, subunits gamma and tau [Phaeobacter gallaeciensis BS107] Length = 606 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + +IEL D ++E ++ +L +VS++ GR+ + + P+D L +L+ WT Sbjct: 467 SFEHVIELIRVKRDGLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQTWTH 526 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W I + E ++AV FP A++ IRT +L Sbjct: 527 ARWVISLANEGGGETITERDNAAENALRAEASTHPMVQAVLESFPKAKIRHIRTAEDL 584 >gi|163740347|ref|ZP_02147741.1| DNA polymerase III subunits gamma and tau [Phaeobacter gallaeciensis 2.10] gi|161386205|gb|EDQ10580.1| DNA polymerase III subunits gamma and tau [Phaeobacter gallaeciensis 2.10] Length = 611 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + +IEL D ++E ++ +L +VS++ GR+ + + P+D L +L+ WT Sbjct: 472 SFEHVIELIRVKRDGLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQTWTH 531 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W I + E ++AV FP A++ IRT +L Sbjct: 532 ARWVISLANEGGGETITERENAAENALRAEASTHPMVQAVLESFPKAKIRHIRTAEDL 589 >gi|221640167|ref|YP_002526429.1| DNA polymerase III subunits gamma and tau [Rhodobacter sphaeroides KD131] gi|221160948|gb|ACM01928.1| DNA polymerase III, subunits gamma and tau [Rhodobacter sphaeroides KD131] Length = 582 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 15/117 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 +Q++EL + D K++ ++ + +V F GR+E + D L+ +L+ WTG Sbjct: 446 SFEQMVELIRQKRDMKLLYEVETGVRLVRFAPGRIEFEPAPDAAPDLAARLSQRLQGWTG 505 Query: 123 EDWEIR-FSLGR-CCEYFEID-------------SDIKAVRTIFPTAQVVCIRTIPN 164 W I S G E D ++AV FP A++ IR + Sbjct: 506 GRWGISVVSGGGAPTLAEERDKGRLEEEARALENPLVQAVMAAFPGARIAEIRRLEE 562 >gi|126739558|ref|ZP_01755250.1| DNA polymerase III subunits gamma and tau [Roseobacter sp. SK209-2-6] gi|126719204|gb|EBA15914.1| DNA polymerase III subunits gamma and tau [Roseobacter sp. SK209-2-6] Length = 603 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL D ++E ++ +L +V+++ GR+ + + P+D L +L+ WT Sbjct: 464 TFEHVVELIRVKRDGLLLEYVKTYLRLVAYQPGRITIQPTNDAPKDLAARLGQQLQGWTH 523 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRT 161 W I E + ++AV FP A++ IRT Sbjct: 524 ARWIISLENEGGGETITERENAAENALRDKAKAHPLVQAVLESFPKAKITKIRT 577 >gi|288959353|ref|YP_003449694.1| DNA polymerase III subunit gamma/tau [Azospirillum sp. B510] gi|288911661|dbj|BAI73150.1| DNA polymerase III subunit gamma/tau [Azospirillum sp. B510] Length = 636 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 16/159 (10%) Query: 20 SFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPD-NYTKQLIELCEKNHDYK 78 ++ A+ R+I+S + A +P + L++L + Sbjct: 439 PASMATQAVARSIASAQPQSAPVAQTAPAPTPAPAGEELSPMPRDFRALVQLFSDRREGA 498 Query: 79 MVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG------ 132 + L + +V E GRLE+ P + L WTG+ W + S G Sbjct: 499 LYGYLMETVQLVRMEPGRLELKLRPAAPPTLPAKVGQFLGEWTGQRWIVALSDGPAQPTL 558 Query: 133 ---------RCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 R E + ++AV F A+++ +R + Sbjct: 559 AEQEQAERNRAWSEAEANPVVRAVLDAFSGAKIIDVRDL 597 >gi|149203327|ref|ZP_01880297.1| DNA polymerase III subunits gamma and tau [Roseovarius sp. TM1035] gi|149143160|gb|EDM31199.1| DNA polymerase III subunits gamma and tau [Roseovarius sp. TM1035] Length = 588 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL N D K++ ++ + + ++ GR+E + + P D + L + L+ WTG Sbjct: 449 SFEHVLELIRANRDVKLLLEVEGHIRLANYRPGRIEFTPTPDAPGDLAQRLGSALQRWTG 508 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + ++AV FP A++ ++T ++ Sbjct: 509 NRWAVTLVNSATAPTIVEARNAAKDAAESDARQHPLVQAVFAAFPRAKIARVKTEKDI 566 >gi|163732699|ref|ZP_02140144.1| DNA polymerase III subunits gamma and tau [Roseobacter litoralis Och 149] gi|161394059|gb|EDQ18383.1| DNA polymerase III subunits gamma and tau [Roseobacter litoralis Och 149] Length = 584 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++EL N D K++ ++ + + ++ GR+E + + P D + L +L+ WTG Sbjct: 445 SFDHVVELIRTNRDVKLLVEVEGCVRLAQYQPGRIEFAPTENAPADLAQRLGQRLQLWTG 504 Query: 123 EDWEIRFSLGRCCEYFE---------------IDSDIKAVRTIFPTAQVVCIRT 161 W + ++AV FP A++ I+T Sbjct: 505 NRWAVTIVNDASAPTIAEKRDAAELDLQSKALAHPMMQAVLAQFPKARITSIKT 558 >gi|85703838|ref|ZP_01034941.1| DNA polymerase III subunits gamma and tau [Roseovarius sp. 217] gi|85671158|gb|EAQ26016.1| DNA polymerase III subunits gamma and tau [Roseovarius sp. 217] Length = 587 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 62/166 (37%), Gaps = 25/166 (15%) Query: 22 AIGENALPRNISSDECFPLAEAGITE-------KQDVLNRLSACTPDNYTKQLIELCEKN 74 + + ++++ + + QD L+ + ++EL N Sbjct: 403 SPNQTTAAQSVTYTQTHSGPSGPVAHGSASPMLAQDPEEALARYP---TFEHMLELIRTN 459 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRC 134 D K++ ++ L + ++ GR+E + + P D + L + L+ WTG W + Sbjct: 460 RDVKLLLEVEGSLRLANYRPGRIEFTPTPDAPGDLAQRLGSALQRWTGNRWAVTVVNSAT 519 Query: 135 CEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 + ++AV FP A++ ++T+ ++ Sbjct: 520 APTILEARNAAEDALEAEAQQHPLVQAVFAAFPKAKIARVKTVQDI 565 >gi|84516011|ref|ZP_01003372.1| DNA polymerase III subunits gamma and tau [Loktanella vestfoldensis SKA53] gi|84510453|gb|EAQ06909.1| DNA polymerase III subunits gamma and tau [Loktanella vestfoldensis SKA53] Length = 572 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 15/113 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + +++L + D K++ ++ L +VS++ GR+ V + D + L +L+ WTG Sbjct: 434 FEDVVQLIRHHRDVKLLVEVETGLQLVSYQPGRITVQPTADAAPDLVGRLGARLQLWTGN 493 Query: 124 DWEIRFSLGRCCEYFE---------------IDSDIKAVRTIFPTAQVVCIRT 161 W I ++AV FP A++ IRT Sbjct: 494 RWTITVVSDGGAPTIAQTRDAAETSLRDQASAHPLVQAVIAAFPKARITDIRT 546 >gi|297182771|gb|ADI18925.1| DNA polymerase III, gamma/tau subunits [uncultured SAR11 cluster bacterium HF0010_09O16] Length = 557 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 72/171 (42%), Gaps = 16/171 (9%) Query: 5 SWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITE-KQDVLNRLSACTPDNY 63 S + K + + N +N + + +++ + ++D + N Sbjct: 380 SHLEEDKIDQLKKRQNDELVTNDKIKNETISQIKNISQEQKLKIEKDEGIKAGGKLNVNS 439 Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 L+ +C + + K+ L++ +++V F+ ++E+SF + + ++F+++L+ KL WTGE Sbjct: 440 FDDLLIICNQKKEIKLKYELEKNVNLVRFDNKQIEISFNENLDKNFVKDLSLKLFEWTGE 499 Query: 124 DWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCI 159 W I S + + K++ FP A ++ + Sbjct: 500 RWIITLSKTKGGLSVKDKEKNKRIENINNAKQSKLYKSLIEKFPDADLIDV 550 >gi|86747794|ref|YP_484290.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas palustris HaA2] gi|86570822|gb|ABD05379.1| DNA polymerase III, subunits gamma and tau [Rhodopseudomonas palustris HaA2] Length = 627 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 15/118 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 QL+ L + D L+ + +V E GRLE++ + I L KL+ W Sbjct: 487 ITSFPQLVALASEKRDVMTRMALEADVRLVRIEDGRLELALERTASRSLIGELGRKLEQW 546 Query: 121 TGEDWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRTIP 163 TG W + S G+ E D ++ V FP A+V+ +R + Sbjct: 547 TGRRWTVIVSNEPGQPTLRSQNEAQKNERERAAESDPRVQEVLARFPGAKVIEVRRLA 604 >gi|295691235|ref|YP_003594928.1| DNA polymerase III subunits gamma and tau [Caulobacter segnis ATCC 21756] gi|295433138|gb|ADG12310.1| DNA polymerase III, subunits gamma and tau [Caulobacter segnis ATCC 21756] Length = 616 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 15/125 (12%) Query: 53 NRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 A ++ L D + +++++ ++F G + P + Sbjct: 477 PGAQAMPVLASFDDVMALIAAKRDIGLRLDVEQYVRPINFRPGAITFEAAPGAPGNLAGR 536 Query: 113 LATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVV 157 L LK TG+ W + G E + D + +V + FP A++V Sbjct: 537 LVRFLKEHTGQPWLVAAEGGGGAESLMERQKREEREALEQIKKDPFVASVLSAFPGAEIV 596 Query: 158 CIRTI 162 IR + Sbjct: 597 EIRKV 601 >gi|304392342|ref|ZP_07374283.1| DNA polymerase III subunit tau [Ahrensia sp. R2A130] gi|303295446|gb|EFL89805.1| DNA polymerase III subunit tau [Ahrensia sp. R2A130] Length = 672 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 26/158 (16%) Query: 29 PRNISSDECFPLAEAGITEKQDVLNRLSACTP-----------DNYTKQLIELCEKNHDY 77 P+ + +E AE ++ + K +++L E D Sbjct: 455 PQLVVENETVAEAEPVKRPAPQLVPQADPEPVAPPVAAPAYDNVESLKDMLDLAEAKRDI 514 Query: 78 KMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEY 137 + L+ VSF G + P+D + +L +WTG W + + E Sbjct: 515 RFKMQLRNNFSEVSFAPGHIVFRPTGNAPKDLARTITDRLLDWTGTRWTVETTHEGGSET 574 Query: 138 F---------------EIDSDIKAVRTIFPTAQVVCIR 160 E + AV FP +++ +R Sbjct: 575 ISDQESAEHDRTMADAEAHPVVAAVLKAFPRSKITQVR 612 >gi|221233207|ref|YP_002515643.1| DNA polymerase III subunits gamma and tau [Caulobacter crescentus NA1000] gi|220962379|gb|ACL93735.1| DNA polymerase III subunit gamma/tau [Caulobacter crescentus NA1000] Length = 623 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 15/125 (12%) Query: 53 NRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 A ++ L D + +++++ ++F G + P + Sbjct: 484 PGAQAMPVLASFDDVMALIAAKRDIGLRLDVEQYVRPINFRPGAITFEAAPGAPGNLAGR 543 Query: 113 LATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVV 157 L LK TG+ W + G E + D + +V + FP A++V Sbjct: 544 LVRFLKEHTGQPWLVAAEGGGGAESLMERQKREEREALEAIKQDPFVASVLSAFPGAEIV 603 Query: 158 CIRTI 162 IR I Sbjct: 604 EIRKI 608 >gi|1293572|gb|AAB61695.1| DNA polymerase III tau homolog DnaX [Caulobacter crescentus CB15] Length = 608 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 15/125 (12%) Query: 53 NRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 A ++ L D + +++++ ++F G + P + Sbjct: 469 PGAQAMPVLASFDDVMALIAAKRDIGLRLDVEQYVRPINFRPGAITFEAAPGAPGNLAGR 528 Query: 113 LATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVV 157 L LK TG+ W + G E + D + +V + FP A++V Sbjct: 529 LVRFLKEHTGQPWLVAAEGGGGAESLMERQKREEREALEAIKQDPFVASVLSAFPGAEIV 588 Query: 158 CIRTI 162 IR I Sbjct: 589 EIRKI 593 >gi|16124522|ref|NP_419086.1| DNA polymerase III subunits gamma and tau [Caulobacter crescentus CB15] gi|13421402|gb|AAK22254.1| DNA polymerase III, gamma and tau subunits [Caulobacter crescentus CB15] Length = 608 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 15/125 (12%) Query: 53 NRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 A ++ L D + +++++ ++F G + P + Sbjct: 469 PGAQAMPVLASFDDVMALIAAKRDIGLRLDVEQYVRPINFRPGAITFEAAPGAPGNLAGR 528 Query: 113 LATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVV 157 L LK TG+ W + G E + D + +V + FP A++V Sbjct: 529 LVRFLKEHTGQPWLVAAEGGGGAESLMERQKREEREALEAIKQDPFVASVLSAFPGAEIV 588 Query: 158 CIRTI 162 IR I Sbjct: 589 EIRKI 593 >gi|86140173|ref|ZP_01058735.1| DNA polymerase III subunits gamma and tau [Roseobacter sp. MED193] gi|85823110|gb|EAQ43323.1| DNA polymerase III subunits gamma and tau [Roseobacter sp. MED193] Length = 608 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 15/114 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++EL + D ++E ++ +L +VS++ GR+ + ++ P+D L +L+NWT Sbjct: 469 SFEHVVELIRQRRDGLLLEYVKTYLRLVSYQPGRITIQPTQDAPKDLAARLGQQLQNWTH 528 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRT 161 W I + ++AV FP A++ IRT Sbjct: 529 ARWIISLENEGGGDTITELENAAENALRAKASEHPLVQAVMENFPKAKITRIRT 582 >gi|75674567|ref|YP_316988.1| DNA polymerase III subunits gamma and tau [Nitrobacter winogradskyi Nb-255] gi|74419437|gb|ABA03636.1| DNA polymerase III gamma/tau subunits [Nitrobacter winogradskyi Nb-255] Length = 611 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 15/116 (12%) Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 +L+ L + D + L+ + +V E GRLEV+ + + +L KL+ W Sbjct: 473 IESLGELVALAGEKRDLIIKAALEADIRLVRIENGRLEVALERSAARTLVNDLGRKLEQW 532 Query: 121 TGEDWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRT 161 TG W + S G+ E D ++ V FP A+VV +R Sbjct: 533 TGRRWTVIVSNEPGQPTLRSQALLQKSERERAAEADPRVQDVLARFPGAKVVEVRK 588 >gi|121602189|ref|YP_989487.1| DNA polymerase III subunits gamma and tau [Bartonella bacilliformis KC583] gi|120614366|gb|ABM44967.1| DNA polymerase III, subunits gamma and tau [Bartonella bacilliformis KC583] Length = 634 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 23/177 (12%) Query: 7 KKRKKKLDALNVSSFAIGENALPR--------NISSDECFPLAEAGITEKQDVLNRLSAC 58 K D + S ++G S E P + + V Sbjct: 433 TPLDNKPDFSSQFSKSLGFQTSKSADSLKTEEISSMIESLPDSANLFSTSSTVKESEQHP 492 Query: 59 TPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLK 118 N +++L +++ D ++ F+H VSFE G + + ++ P +L L Sbjct: 493 FVINSLHDIVKLADQHRDIHFKLLITEFIHPVSFEPGHIVLRLAEDAPHSLARDLKKMLH 552 Query: 119 NWTGEDWEIRF--SLGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 WTG+ W I G+ E + DI + FP A++V IR Sbjct: 553 QWTGQHWAITLVNKGGKPTLQEENSAAQKALFSDVQTNPDIVKILNHFPGAKIVDIR 609 >gi|146276573|ref|YP_001166732.1| DNA polymerase III subunits gamma and tau [Rhodobacter sphaeroides ATCC 17025] gi|145554814|gb|ABP69427.1| DNA polymerase III, subunits gamma and tau [Rhodobacter sphaeroides ATCC 17025] Length = 582 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 15/117 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 Q++E+ + D K++ ++ + +V F GR+E + D L+ +L+ WTG Sbjct: 446 SFGQMVEMIRQKRDMKLLYEVETGVRLVRFAPGRIEFEPAPDAAPDLAARLSQRLQGWTG 505 Query: 123 EDWEIR-FSLGR-CCEYFEID-------------SDIKAVRTIFPTAQVVCIRTIPN 164 W + S G E D ++AV FP A++ IR + Sbjct: 506 ARWGVSVVSGGGAPTLAEERDKGRLEEEARALENPLVQAVMAAFPGARIAEIRKLEE 562 >gi|118590526|ref|ZP_01547928.1| DNA polymerase III subunits gamma and tau [Stappia aggregata IAM 12614] gi|118436989|gb|EAV43628.1| DNA polymerase III subunits gamma and tau [Stappia aggregata IAM 12614] Length = 640 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 15 ALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKN 74 A S A R S + + L + Sbjct: 449 ASGNSGSGPTMQASGRPQLSAIQGGRPAPQTAPQAAPEPQAQPAYNLKNLYDCAALASEK 508 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFS--LG 132 D +QR + +V FE G++E+ + P D KL WTG+ W + S G Sbjct: 509 GDIPFKVKIQRLMRLVKFEPGKIEIQPTDDAPADIAGEFGRKLTEWTGQRWFVVVSRNQG 568 Query: 133 RCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 R + E + A+ FP A+VV ++ Sbjct: 569 RPTIHEEQEANQQQLLSDAKSHPTVAALLAQFPGARVVDVK 609 >gi|159043203|ref|YP_001531997.1| DNA polymerase III subunits gamma and tau [Dinoroseobacter shibae DFL 12] gi|157910963|gb|ABV92396.1| DNA polymerase III [Dinoroseobacter shibae DFL 12] Length = 587 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 15/113 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 ++ L + D K++ ++ L + ++ GR+E + + P D LA +L++WTG Sbjct: 449 FDDVVALIRSHRDVKLLVEVEGCLRLAAYSPGRIEFAPTENAPRDLAARLAARLQSWTGA 508 Query: 124 DWEIRFSLG---------RCCEYFEI------DSDIKAVRTIFPTAQVVCIRT 161 W + R E E+ + AV FP A++ IRT Sbjct: 509 RWAVSVVAEADAPTIAETRDAEKLEMERNALDHPLVAAVFAAFPKARITEIRT 561 >gi|302381707|ref|YP_003817530.1| DNA polymerase III subunits gamma/tau [Brevundimonas subvibrioides ATCC 15264] gi|302192335|gb|ADK99906.1| DNA polymerase III, subunits gamma and tau [Brevundimonas subvibrioides ATCC 15264] Length = 612 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 15/116 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++ L + + + +QR++ VSF+ G L ++ P + L+++LK WTG Sbjct: 480 TFEAVVALIGERREIALQMDVQRYVRPVSFKPGALTYEPVEGAPANLATRLSSRLKEWTG 539 Query: 123 EDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIP 163 W + + E E D + AV FP A V I+T+ Sbjct: 540 RPWFVVANGQGGGETLIEQEKKATAALRAEVEADPFVVAVMAAFPGAVVGEIKTLA 595 >gi|114568986|ref|YP_755666.1| DNA polymerase III subunits gamma and tau [Maricaulis maris MCS10] gi|114339448|gb|ABI64728.1| DNA polymerase III, tau subunit [Maricaulis maris MCS10] Length = 606 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 16/127 (12%) Query: 51 VLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFI 110 V A + + L++L + D + ++R++ F+ G +++ P D Sbjct: 463 VEQDAPAISGPQTWEALMDLLREKRDIGLQSDVERYVRPAVFKPGSFTFQPIEDAPRDLA 522 Query: 111 ENLATKLKNWTGEDWEI----RFSLGRCC------------EYFEIDSDIKAVRTIFPTA 154 + L+ +L WTGE W I G E D + V +FP A Sbjct: 523 QRLSRRLLEWTGERWMILADGSLEGGETWSERRLRLKAERLEAARHDPAVTEVMRLFPGA 582 Query: 155 QVVCIRT 161 ++V IR Sbjct: 583 EIVKIRD 589 >gi|294085056|ref|YP_003551816.1| replication factor C domain-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664631|gb|ADE39732.1| replication factor C conserved domain:ATP/GTP-binding site motif A [Candidatus Puniceispirillum marinum IMCC1322] Length = 620 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 16/160 (10%) Query: 20 SFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTP-DNYTKQLIELCEKNHDYK 78 S A N ++ + P + TP N + L E + Sbjct: 440 SGAPSTNVAIQHQPDQQTVPAQNTDADADAAPDRLAANDTPPLNTLADIATLAEDKGEML 499 Query: 79 MVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCC--- 135 + +++ + +V+ + G LE++ + PE F+ +LA L++WTG W + S Sbjct: 500 LAALIRNHVRLVALQPGLLEIALSGKPPEKFLGDLAQHLRHWTGARWLVSLSDETAGKTL 559 Query: 136 ------------EYFEIDSDIKAVRTIFPTAQVVCIRTIP 163 + + + ++FP A + I I Sbjct: 560 AEAKADAAAVRLDTIAKTPLVAKIISVFPGATIEDISAID 599 >gi|192289049|ref|YP_001989654.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas palustris TIE-1] gi|192282798|gb|ACE99178.1| DNA polymerase III, subunits gamma and tau [Rhodopseudomonas palustris TIE-1] Length = 623 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 15/120 (12%) Query: 60 PDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 QL+ L + D L+ + +V E GRLE++ I +L KL+ Sbjct: 485 KITTFPQLVALASEKRDVMTRLALEADVRLVRIEDGRLELALEPSASRSLINDLGRKLEQ 544 Query: 120 WTGEDWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRTIPN 164 WTG W + S G E D ++ V FP A++ R P Sbjct: 545 WTGRRWTVIVSNAPGEPTLRQQSMAQQNERERAAENDPRVQEVLARFPGAKLTVRRLAPE 604 >gi|39933692|ref|NP_945968.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas palustris CGA009] gi|39647538|emb|CAE26059.1| possible DNA polymerase III tau subunit [Rhodopseudomonas palustris CGA009] Length = 623 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 15/120 (12%) Query: 60 PDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 QL+ L + D L+ + +V E GRLE++ I +L KL+ Sbjct: 485 KITTFPQLVALASEKRDVMTRLALEADVRLVRIEDGRLELALEPSASRSLINDLGRKLEQ 544 Query: 120 WTGEDWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRTIPN 164 WTG W + S G E D ++ V FP A++ R P Sbjct: 545 WTGRRWTVIVSNAPGEPTLRQQSMAQQNERERAAENDPRVQEVLARFPGAKLTVRRLAPE 604 >gi|319403646|emb|CBI77231.1| DNA polymerase III subunit tau [Bartonella rochalimae ATCC BAA-1498] Length = 630 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 15/164 (9%) Query: 12 KLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELC 71 K+ F ++ + + + Q + + +++L Sbjct: 443 KIKTSEKIDFCNKIETRENVQTNQLNKNIINSSQIDPQLDTKATKEKIIIDSLQDIVDLA 502 Query: 72 EKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF-- 129 +++++ +++ F+H VSFE + + +E P ++ L WTG+ W I Sbjct: 503 DQHNEIHFKLLIKEFVHPVSFEPQHITLRLAEEAPRSLERDIKKMLYQWTGKHWNITLVN 562 Query: 130 SLGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 G+ E D DI + FP A+++ IR Sbjct: 563 EGGKPTLQEESVAIQKSLFADAQTDPDIAKILNTFPGAKIIDIR 606 >gi|126731114|ref|ZP_01746922.1| DNA polymerase III subunits gamma and tau [Sagittula stellata E-37] gi|126708416|gb|EBA07474.1| DNA polymerase III subunits gamma and tau [Sagittula stellata E-37] Length = 587 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 15/121 (12%) Query: 56 SACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLAT 115 A + +++L N D K++ ++ L + +++ GR+E + L Sbjct: 441 EALAHYATFEHVLDLIRANRDVKLLVEVEGGLRLAAYQPGRIEFTPTDTADPQLASKLGA 500 Query: 116 KLKNWTGEDWEIRFSLG--RCCEYFEID-------------SDIKAVRTIFPTAQVVCIR 160 L+ WTG W + G D ++A FP A + IR Sbjct: 501 ALQRWTGNRWAVTLVNGCEAPTVTERRDAADRALKAEAAQHPLVQAALAAFPKATITSIR 560 Query: 161 T 161 T Sbjct: 561 T 561 >gi|126725863|ref|ZP_01741705.1| DNA polymerase III subunits gamma and tau [Rhodobacterales bacterium HTCC2150] gi|126705067|gb|EBA04158.1| DNA polymerase III subunits gamma and tau [Rhodobacterales bacterium HTCC2150] Length = 596 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 15/117 (12%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + ++EL + D K++ ++ + + ++ GR+E + P D + L+ +L+ WTG Sbjct: 458 FEDVVELIRLHRDVKLLVEVETGIRLANYSPGRIEFEASEHAPADLAQRLSARLQAWTGV 517 Query: 124 DWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIRTIPNL 165 W + + + +KAV FP A++ I + + Sbjct: 518 RWGVTLVNEGGAKTISELRDADKIALENKARDHAMVKAVLLAFPKAKIDSIVSQKEI 574 >gi|319405116|emb|CBI78722.1| DNA polymerase III subunit tau [Bartonella sp. AR 15-3] Length = 633 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 15/167 (8%) Query: 9 RKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLI 68 ++ K+ A + F ++ ++ + Q + N K ++ Sbjct: 443 KQLKITASEKTDFCNKIESIENVQTNQLDSNITNLSHVIPQSEMEATEQKIIINSLKDIV 502 Query: 69 ELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIR 128 +L E++++ +++ F+H VSFE + + F +E P ++ L WTG+ W I Sbjct: 503 DLAEQHNEIHFKLLIKEFVHPVSFEPQHITLRFAEEAPHSLERDIKKMLYQWTGKHWTIT 562 Query: 129 F--SLGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 G E D +I + FP A+++ IR Sbjct: 563 LVNEGGEPTLQEESIAIQKSLFSDAQTDPNIAKILNNFPGAKIIDIR 609 >gi|310815375|ref|YP_003963339.1| DNA polymerase III, subunits gamma and tau [Ketogulonicigenium vulgare Y25] gi|308754110|gb|ADO42039.1| DNA polymerase III, subunits gamma and tau [Ketogulonicigenium vulgare Y25] Length = 583 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 16/125 (12%) Query: 55 LSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLA 114 S P + ++EL D +++ ++ + + ++ GR+E D LA Sbjct: 437 PSLLAPYATFEAVVELIRDQRDMRLLVEVEGTMRIARYQPGRIEFQPTPNAAPDLAGRLA 496 Query: 115 TKLKNWTGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCI 159 T+L+NWT W + + + AV FP A++ + Sbjct: 497 TRLQNWTHARWAVIIVNEGGAPTITEARDSAENALRDRAAQNPLVAAVLRNFPGAKI-EV 555 Query: 160 RTIPN 164 IP+ Sbjct: 556 TPIPD 560 >gi|319406562|emb|CBI80204.1| DNA polymerase III, subunits gamma and tau [Bartonella sp. 1-1C] Length = 604 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 15/145 (10%) Query: 31 NISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVV 90 I + E T + N+L + + +++L +++++ +++ FLH V Sbjct: 436 KIKTSEKIDFCNKIETCENVQTNQLHKNIIIDSLQDIVDLADQHNEIHFKLLIKEFLHPV 495 Query: 91 SFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF--SLGRCCEYFEI-------- 140 SFE + + +E P ++ L WTG+ W I G+ E Sbjct: 496 SFEPQHITLRLAEEAPRSLERDIKKMLYQWTGKHWTITLVNEGGKPTLQEESVAIQKSLF 555 Query: 141 -----DSDIKAVRTIFPTAQVVCIR 160 D DI + FP A+++ IR Sbjct: 556 ADAQTDPDIAKILNHFPGAKIIDIR 580 >gi|316932084|ref|YP_004107066.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas palustris DX-1] gi|315599798|gb|ADU42333.1| DNA polymerase III, subunits gamma and tau [Rhodopseudomonas palustris DX-1] Length = 624 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 16/119 (13%) Query: 60 PDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 QL+ L + D L+ + +V E GRLE++ I L KL+ Sbjct: 486 KITTFPQLVALASEKRDVMTRLALEADVRLVRIEDGRLELALEPTASRSLINELGRKLEQ 545 Query: 120 WTGEDWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRTIP 163 WTG W + S G+ E D ++ V FP A++ +R + Sbjct: 546 WTGRRWTVIVSNAPGQPTLRQQSEAQQNERERAAENDPRVQEVLARFPGAKLT-VRRLA 603 >gi|49473886|ref|YP_031928.1| DNA polymerase III subunits gamma and tau [Bartonella quintana str. Toulouse] gi|49239389|emb|CAF25723.1| DNA polymerase III subunit tau [Bartonella quintana str. Toulouse] Length = 640 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 19 SSFAIGENALPRNISSDECFPLAEAG-----ITEKQDVLNRLSACTPDNYTKQLIELCEK 73 + +P+ + + + LAE ++ + + +I+L E+ Sbjct: 455 IPESTNSPGIPKILETAQSVNLAENSANLPHLSTQITEEIFGPKTIIIDSLHDIIKLAEQ 514 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF--SL 131 ++ +++ F+H VSFE G + + + P ++ L WT + W I F Sbjct: 515 YNEIPFKLLVKEFVHPVSFEPGHIILRLAENAPRSLARDIKKMLSQWTEKRWTITFVNEG 574 Query: 132 GRCCEYF-------------EIDSDIKAVRTIFPTAQVVCIR 160 G E D DI + FP A++V IR Sbjct: 575 GGPTLQEESMAVQKTLFSNAEADPDIAKILNHFPEAKIVDIR 616 >gi|296775809|gb|ADH43064.1| DNA polymerase III, gamma/tau subunits [uncultured SAR11 cluster alpha proteobacterium H17925_48B19] Length = 514 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 57/134 (42%) Query: 1 LHAISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTP 60 + K ++ N + N + D+ +++ E + + Sbjct: 365 IKGFKEKDVEESFTGKNPDTLIKENEKKITNRTIDQIKNISQQEKIEPNLNKDEVINELK 424 Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + LI LC + + K+ L+ ++VSF G +E+SF + + +DFI+NL+ KL W Sbjct: 425 IGSFESLINLCTERKEAKLKYELETNTNLVSFSEGLIEISFNENLDKDFIKNLSNKLYEW 484 Query: 121 TGEDWEIRFSLGRC 134 T + W I S + Sbjct: 485 TSKRWIISLSKNQG 498 >gi|148260992|ref|YP_001235119.1| DNA polymerase III subunits gamma and tau [Acidiphilium cryptum JF-5] gi|146402673|gb|ABQ31200.1| DNA polymerase III, subunits gamma and tau [Acidiphilium cryptum JF-5] Length = 614 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 15/137 (10%) Query: 39 PLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLE 98 P A + + +I L + D + L+ +V F +E Sbjct: 442 PRAVVNGAPVAPAETAPATAPRLARFEDVIALAGEKRDALLYAHLRHDARLVRFAPPVIE 501 Query: 99 VSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCC-----------EYFEI----DSD 143 ++ E P D LA L+ TG W I S E Sbjct: 502 LNLTPEAPRDLSSRLARFLEAETGRRWTIALSRAAGAPSMVEAETTARETARNEALDHPL 561 Query: 144 IKAVRTIFPTAQVVCIR 160 ++A+ FP A++ + Sbjct: 562 VRAIFETFPGAKIASVE 578 >gi|326404392|ref|YP_004284474.1| DNA polymerase III gamma/tau subunit [Acidiphilium multivorum AIU301] gi|325051254|dbj|BAJ81592.1| DNA polymerase III gamma/tau subunit [Acidiphilium multivorum AIU301] Length = 614 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 15/112 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + +I L + D + L+ +V F +E++ E P D LA L+ TG Sbjct: 467 FEDVIALAGEKRDALLYAHLRHDARLVRFAPPVIELNLTPEAPRDLSSRLARFLEAETGR 526 Query: 124 DWEIRFSLGRCC-----------EYFEI----DSDIKAVRTIFPTAQVVCIR 160 W I S E ++A+ FP A++ + Sbjct: 527 RWTIALSRAAGAPSMVEAETTARETARNEALDHPLVRAIFETFPGAKIASVE 578 >gi|294678278|ref|YP_003578893.1| DNA polymerase III subunit gamma/tau [Rhodobacter capsulatus SB 1003] gi|294477098|gb|ADE86486.1| DNA polymerase III, gamma/tau subunit [Rhodobacter capsulatus SB 1003] Length = 589 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 16/125 (12%) Query: 51 VLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFI 110 V SA + ++ L + D K++ +++ + +V + GR+E P D Sbjct: 437 VSPAASALAKYARFEDVVALIGRMRDVKLLVEVEKGVRLVHYAPGRIEFEPAPGAPRDLA 496 Query: 111 ENLATKLKNWTGEDWEIR-FSLGRCCEYFEI---------------DSDIKAVRTIFPTA 154 + LA +L+ WTG W + S G E + ++A+ FPTA Sbjct: 497 QTLAQRLQGWTGARWGVSVVSEGGAATIDETRNAATLAAEAEARAENRVVQAIFAAFPTA 556 Query: 155 QVVCI 159 + I Sbjct: 557 KFEDI 561 >gi|167041262|gb|ABZ06018.1| putative ATPase family associated with various cellular activities (AAA) [uncultured marine microorganism HF4000_005D21] gi|167045767|gb|ABZ10413.1| putative ATPase family associated with various cellular activities (AAA) [uncultured marine bacterium HF4000_APKG3108] Length = 555 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 2/129 (1%) Query: 18 VSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDY 77 V + E + IS ++ + + + + + LI+L + + Sbjct: 397 VIKKILNEESEITQISKNQIKNTMQTK--PELSLNPKDVDDKNIKSFEDLIKLASEKKEI 454 Query: 78 KMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEY 137 + L+ L+++ F ++++SF + + ++F+ NL+ KL WTG+ W I S + Sbjct: 455 HLKHDLENNLNLIQFSERKIDMSFNENLDKNFVRNLSAKLFEWTGKRWVITLSKEKGQRT 514 Query: 138 FEIDSDIKA 146 F +IK Sbjct: 515 FSELKNIKK 523 >gi|304320347|ref|YP_003853990.1| DNA polymerase III subunits gamma and tau [Parvularcula bermudensis HTCC2503] gi|303299249|gb|ADM08848.1| DNA polymerase III subunits gamma and tau [Parvularcula bermudensis HTCC2503] Length = 607 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 14/131 (10%) Query: 46 TEKQDVLNRLSACTP-----DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVS 100 + ++ L+A +P + L D ++ E ++ L V E GRL+V+ Sbjct: 466 SPERPARPMLTAPSPAPSPTIETLDDIAALAGVKRDARLREEIETCLIPVHLETGRLDVA 525 Query: 101 FLKEIPEDFIENLATKLKNWTGEDWEIRFSL---------GRCCEYFEIDSDIKAVRTIF 151 + P+D L LK WTG W + GR + + + + A + F Sbjct: 526 VTEAAPKDLTGRLGQALKAWTGRPWIVSIVADPGEVPTIRGRRNQAIKANPVVNAALSAF 585 Query: 152 PTAQVVCIRTI 162 P A++ +R + Sbjct: 586 PKARIAAVRPL 596 >gi|23016072|ref|ZP_00055832.1| COG2812: DNA polymerase III, gamma/tau subunits [Magnetospirillum magnetotacticum MS-1] Length = 597 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 16/115 (13%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 ++ L + + + L+ ++ VSF GR+E + D +A L WTG Sbjct: 454 FAAMVALFSERREGLIAVQLRTQVNPVSFAPGRIEWRQNSSVGSDLAPKVARMLSEWTGR 513 Query: 124 DWEIRFSLGRCCE----------------YFEIDSDIKAVRTIFPTAQVVCIRTI 162 W + + + +KAV FP A + +R + Sbjct: 514 RWTVSVNSTDPAQPTLAEQEANAELRRRADAAEHPLVKAVLAAFPGATIEAVRDL 568 >gi|240849897|ref|YP_002971286.1| DNA polymerase III subunits gamma and tau [Bartonella grahamii as4aup] gi|240267020|gb|ACS50608.1| DNA polymerase III subunits gamma and tau [Bartonella grahamii as4aup] Length = 646 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 20/165 (12%) Query: 16 LNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTP-----DNYTKQLIEL 70 N + I + + + + L+E + V T N +++L Sbjct: 452 KNQTPDKINVQEVTETLENSQSIDLSEKSANLSRSVTQTTEKITQPKTLVINSLHDIVQL 511 Query: 71 CEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF- 129 E+++D +++ F+H VSFE G + + + P+ ++ K+ WT + W I F Sbjct: 512 AEQHNDAPFKLLIKEFVHPVSFEAGHITLRLSENTPQFLAHDIEKKISQWTEKRWTITFV 571 Query: 130 -SLGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 G E D DI + FP A++V IR Sbjct: 572 NEGGGPTLQEESIAIQKTLFSNAETDPDIAKILNHFPEAKIVDIR 616 >gi|297182623|gb|ADI18781.1| DNA polymerase III, gamma/tau subunits [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 547 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 60/145 (41%), Gaps = 3/145 (2%) Query: 2 HAISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPD 61 +IS + V + + + IS ++ + + + + Sbjct: 374 KSISSQTNDISTQEK-VIKKNLNKESEITQISKNQIKNTTQTK--PELSLNPKDVDDKNI 430 Query: 62 NYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWT 121 + LI+L + + + L+ +++++ F ++++SF + + + F+ NL+ KL WT Sbjct: 431 KSFEDLIKLASEKKEIHLKHNLENYVNLIQFSERKIDISFNENLDKSFVRNLSEKLLEWT 490 Query: 122 GEDWEIRFSLGRCCEYFEIDSDIKA 146 G+ W I S + F +IK Sbjct: 491 GKRWVITLSKEKGQRTFSELKNIKK 515 >gi|91974569|ref|YP_567228.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas palustris BisB5] gi|91681025|gb|ABE37327.1| DNA polymerase III, subunits gamma and tau [Rhodopseudomonas palustris BisB5] Length = 624 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 16/119 (13%) Query: 60 PDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 QL+ L + D L+ + +V + GRLE++ + I +L KL+ Sbjct: 484 KITTFPQLVALASEKRDVMTRMALEADVRLVRIDDGRLELALERTASRSLINDLGRKLEQ 543 Query: 120 WTGEDWEIRFSL--GRCCE-------------YFEIDSDIKAVRTIFPTAQVVCIRTIP 163 WTG W + S G+ E D ++ V FP A+ +R + Sbjct: 544 WTGRRWTVIVSNEPGQPTLRSQSEAQKNERERAAESDPRVREVLAKFPGAKF-EVRRLA 601 >gi|297183472|gb|ADI19603.1| DNA polymerase III, gamma/tau subunits [uncultured SAR11 cluster bacterium HF0770_37D02] Length = 563 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 18/173 (10%) Query: 5 SWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAG---ITEKQDVLNRLSACTPD 61 S + ++ L+ + + + +S D+ + + K L Sbjct: 387 SSSQLRENLEDFDDKKINLNKKNEINQVSKDQIKNTTQTKPKLTSLKPKNLTENLNLETI 446 Query: 62 NYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWT 121 + LI+L K + ++ L+R + ++ F G+++++F + I ++F+ NLA KL WT Sbjct: 447 PSFEDLIKLTSKKREVELKYDLERNVKLIKFSEGKIDINFDENIGKNFVRNLAEKLLKWT 506 Query: 122 GEDWEIRFSLGRCCEYFEIDSDI---------------KAVRTIFPTAQVVCI 159 G+ W I + + F I K + IF ++V + Sbjct: 507 GKRWIITLTKSTDQKTFLEHQSINKKKLLEEEEKGEVYKKFKDIFSDGELVEV 559 >gi|114704405|ref|ZP_01437313.1| DNA polymerase III subunits gamma and tau [Fulvimarina pelagi HTCC2506] gi|114539190|gb|EAU42310.1| DNA polymerase III subunits gamma and tau [Fulvimarina pelagi HTCC2506] Length = 668 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 22/143 (15%) Query: 33 SSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSF 92 ++ E P + + L EL + N D ++ ++R++ + S Sbjct: 474 AAPEVVPQRVLAQQPVKPAVEIADLVA-------LAELAKHNRDSRLEAWIRRYVRLKSI 526 Query: 93 ELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF-------------- 138 RLE+ E PE L KL +WTG W + + G + Sbjct: 527 GPRRLEIGVTDEAPERLAGELTRKLHDWTGARWSVTVTSGVTGQTLEETKKEKRLALLRD 586 Query: 139 -EIDSDIKAVRTIFPTAQVVCIR 160 E D + AV FP A++ +R Sbjct: 587 AEQDPAVAAVLKAFPGARIADVR 609 >gi|319898354|ref|YP_004158447.1| DNA polymerase III gamma and tau subunit [Bartonella clarridgeiae 73] gi|319402318|emb|CBI75857.1| DNA polymerase III gamma and tau subunit [Bartonella clarridgeiae 73] Length = 634 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 4 ISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNY 63 I ++ D + + + P +E TE++ ++ N Sbjct: 447 IKTSEKTNLCDTVEIREIVQTNQPDENIKNLSHISPQSEIETTEQKPII--------INS 498 Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + +++L E++++ +++ F+H VSFE + + +E P ++ L WTG+ Sbjct: 499 LQDIVDLAEQHNEIHFKLLIKEFVHPVSFEPEHITLRLAEEAPRSLERDIKKMLHQWTGK 558 Query: 124 DWEIRF--SLGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 I G + D DI + FP A+++ IR Sbjct: 559 HCTITLVNEGGEPTLQEKSIAIQKSLFSDAQTDPDIAKILNNFPGAKIIDIR 610 >gi|89056367|ref|YP_511818.1| DNA polymerase III subunits gamma and tau [Jannaschia sp. CCS1] gi|88865916|gb|ABD56793.1| DNA polymerase III subunits gamma and tau [Jannaschia sp. CCS1] Length = 584 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 + ++ L E D K++ ++ L +VS+ GRLEV P D I L L TG Sbjct: 442 TFESVVALVEGARDIKLLIEVKTCLRLVSYAPGRLEVEVTDTAPRDLIPRLGRMLHTATG 501 Query: 123 EDWEIRF--SLGRCCEYFE-------------IDSDIKAVRTIFPTAQVVCIRTIPNL 165 W I S G + ++AV + FP A++ IR+ L Sbjct: 502 ARWGISVASSGGTTTIQEQEQAAQKEAEAEVTQHPLMQAVLSRFPKARIAEIRSHAAL 559 >gi|83594802|ref|YP_428554.1| DNA polymerase III subunits gamma and tau [Rhodospirillum rubrum ATCC 11170] gi|83577716|gb|ABC24267.1| DNA-directed DNA polymerase [Rhodospirillum rubrum ATCC 11170] Length = 659 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 10/111 (9%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL--GRLEVSFLKEIPEDFIENLATKLKNW 120 L++L + + + L R + +V ++ G LE+ L P + L W Sbjct: 503 SFALLVDLFRRKREAVVTGHLYRDVELVGYDPEAGLLEIHPLPAAPAKLAGQITRLLGEW 562 Query: 121 TGEDWEIRFS--LGRCCEY------FEIDSDIKAVRTIFPTAQVVCIRTIP 163 TG W + + G+ + +KAV FP A + IR P Sbjct: 563 TGRRWMVTLTDRPGQPTLHDATQADIHAHPLVKAVLDRFPGAVIGTIREHP 613 >gi|83313202|ref|YP_423466.1| DNA polymerase III subunits gamma and tau [Magnetospirillum magneticum AMB-1] gi|82948043|dbj|BAE52907.1| DNA polymerase III, gamma/tau subunits [Magnetospirillum magneticum AMB-1] Length = 599 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 27/165 (16%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 DA++ G P + P+AE A PD ++ L + Sbjct: 417 DAVSNHHMGGGPVHGPATALKLQPAPVAETVTLP---------AMPPD--FAAVVALFTE 465 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF---- 129 + + L+ +++VSF GR+E + D A L WTG W + Sbjct: 466 RREGLIAVQLRTQVNLVSFAAGRIEWRQNSGVGSDLAPKTARLLSEWTGRRWTVSVNSTD 525 Query: 130 SLGRCCEYFEID------------SDIKAVRTIFPTAQVVCIRTI 162 S E + +KAV FP A + +R + Sbjct: 526 SAQPTLAEQEANAELRRRADAAELPLVKAVLAAFPGATIEAVRDL 570 >gi|163867528|ref|YP_001608727.1| DNA polymerase III subunits gamma and tau [Bartonella tribocorum CIP 105476] gi|161017174|emb|CAK00732.1| DNA polymerase III gamma and tau subunit [Bartonella tribocorum CIP 105476] Length = 646 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 17/175 (9%) Query: 2 HAISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACT-P 60 H++ + K N + + E L + S+D +A + Q V T Sbjct: 443 HSLKPENFVKNKTHDNAKAQEVIE-ILETSQSTDFSKNIANLSHSVTQPVEEITEPKTLV 501 Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 N +++L E++ D +++ F+H VSFE GR+ + + P+ ++ K+ W Sbjct: 502 INSLHDIVKLAEQHSDVPFKLLVKEFVHPVSFETGRITLRLSENTPQFLAHDIEKKISQW 561 Query: 121 TGEDWEIRF--SLGRCCEYFEI-------------DSDIKAVRTIFPTAQVVCIR 160 + + + F G E D DI + FP A++V IR Sbjct: 562 ARKRYVVTFVNEGGGPTLQEESVAIQKTLFSHAETDPDIAKILNHFPEAKIVDIR 616 >gi|49475044|ref|YP_033085.1| DNA polymerase III subunits gamma and tau [Bartonella henselae str. Houston-1] gi|49237849|emb|CAF27044.1| DNA polymerase III subunit tau [Bartonella henselae str. Houston-1] Length = 646 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 22/149 (14%) Query: 27 ALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRF 86 P+NI++ + + + +++L E++ + ++ F Sbjct: 475 TNPQNITNLPHPSTHTTKQATQPKAI-------VIDSLHDIVKLAEQHDEITFKLLITEF 527 Query: 87 LHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRF--SLGRCCEYF------ 138 +H VSFE G + + + P ++ L WT + I F G Sbjct: 528 VHPVSFEPGHIILRIAENAPHSLKNDIKKMLSQWTEKRLTITFVNEGGGPTLQEESMAIQ 587 Query: 139 -------EIDSDIKAVRTIFPTAQVVCIR 160 E D DI + FP A++V IR Sbjct: 588 KTLFSNAEADPDIAKILYHFPEAKIVDIR 616 >gi|114326925|ref|YP_744082.1| DNA polymerase III subunits gamma and tau [Granulibacter bethesdensis CGDNIH1] gi|114315099|gb|ABI61159.1| DNA polymerase III subunit gamma/tau [Granulibacter bethesdensis CGDNIH1] Length = 686 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 15/118 (12%) Query: 57 ACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATK 116 + +++ + E + + L +H+V F +E+ +P LA Sbjct: 490 PVPVFHSFREVAQFVESRREAMLHAHLLHNVHLVRFAPPVIELRLESNVPHTLPAQLAAL 549 Query: 117 LKNWTGEDWEIRFS--LGRCCEYFE-------------IDSDIKAVRTIFPTAQVVCI 159 L G+ W I S G + ++A+ FP A++ + Sbjct: 550 LGEANGQRWTIALSSAPGEPTLAEQGRAAGESRLAQASNHPVVRAILNAFPGARLGTV 607 >gi|46204299|ref|ZP_00050200.2| COG2812: DNA polymerase III, gamma/tau subunits [Magnetospirillum magnetotacticum MS-1] Length = 451 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 31/78 (39%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + ++ E D + L+R +H+V FE GR+E + +LA L WTG Sbjct: 297 FEDVVAQAEAARDIALKVALERDVHLVRFEEGRIEFRLAQGGRATLANDLARALDAWTGR 356 Query: 124 DWEIRFSLGRCCEYFEID 141 W + S + Sbjct: 357 RWVVAVSKDEGAPTLAEN 374 >gi|83859372|ref|ZP_00952893.1| DNA polymerase III subunits gamma and tau [Oceanicaulis alexandrii HTCC2633] gi|83852819|gb|EAP90672.1| DNA polymerase III subunits gamma and tau [Oceanicaulis alexandrii HTCC2633] Length = 586 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 LI L ++ D + ++R VS + G + + P + +A L+ TGE Sbjct: 452 LDALIALVDEARDIGLKLDIERCFRPVSIKPGAIVFEPTQNAPSNLGGRIAAFLQEQTGE 511 Query: 124 DWEIRF---SLGRCC-------------EYFEIDSDIKAVRTIFPTAQVVCI 159 W + S G + D + T+FP A+++ + Sbjct: 512 RWLVDSKPKSKGGETIAERRERQHEERMDAVRRDPAMVKALTLFPGAEILTV 563 >gi|163795453|ref|ZP_02189420.1| DNA polymerase III, gamma/tau subunits [alpha proteobacterium BAL199] gi|159179439|gb|EDP63970.1| DNA polymerase III, gamma/tau subunits [alpha proteobacterium BAL199] Length = 610 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 15/132 (11%) Query: 47 EKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIP 106 + K L EL + + L +H VS+ GR+++ Sbjct: 447 PADAQEPEDARAEVPATFKALAELFHARGEPVLSAQLSGSVHCVSYAPGRIDIRPQNGTD 506 Query: 107 EDFIENLATKLKNWTGEDWEIRFSL--GRCCEYFEI-------------DSDIKAVRTIF 151 F +A L WTG+ W++R S G + + V +F Sbjct: 507 PRFAAQIAAHLGRWTGQPWDVRISREDGEATLREQAVTAKAEHFAKLAEHPVVSKVLELF 566 Query: 152 PTAQVVCIRTIP 163 P A++ + P Sbjct: 567 PGARIEEVTAPP 578 >gi|329114766|ref|ZP_08243523.1| DNA polymerase III subunit Tau [Acetobacter pomorum DM001] gi|326695897|gb|EGE47581.1| DNA polymerase III subunit Tau [Acetobacter pomorum DM001] Length = 712 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 16/159 (10%) Query: 20 SFAIGENALP-RNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYK 78 S + G P R +S + A + ++ + L + + Sbjct: 514 SASAGHQPPPLRMVSGGQSVSAAVPVVAPVSAPSPEPQVFPNPRTWREAVALVKDQKEAI 573 Query: 79 MVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRC---- 134 + L+ H+VSF G + + F + +P + L L TG W + S Sbjct: 574 LHGQLRHAAHLVSFAPGHIVLRFEQHVPSGAAQELRKVLDRATGMSWRVGLSEEEGEPTL 633 Query: 135 -----------CEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 + E +KA+ FP A++ +R Sbjct: 634 DAQGAEIIQFRRKEAEAHPLVKAILKFFPDAELGEVRDH 672 >gi|321472924|gb|EFX83893.1| hypothetical protein DAPPUDRAFT_315316 [Daphnia pulex] Length = 556 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 19/155 (12%) Query: 26 NALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQR 85 P + +T + ++ S K LIE + + L + Sbjct: 404 KGAASPKKEIAVSPTIQIKLTP--PLPSQASFSPLLQDFKGLIEAVIAKREGLLQTHLLQ 461 Query: 86 FLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEI-----------RFSLGRC 134 + +V+FE GRLE+S P D + L LK++TG W++ S + Sbjct: 462 DIVLVTFEQGRLEISLKPGAPTDLPKRLQAFLKDYTGTSWKVILVPFSENLGPTLSEKKA 521 Query: 135 ------CEYFEIDSDIKAVRTIFPTAQVVCIRTIP 163 E ++ R FP + ++T+P Sbjct: 522 EQERLIKEKVNAHPILEKARAFFPGVVLEEVKTLP 556 >gi|258541156|ref|YP_003186589.1| DNA polymerase III subunits gamma/tau [Acetobacter pasteurianus IFO 3283-01] gi|256632234|dbj|BAH98209.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635291|dbj|BAI01260.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638346|dbj|BAI04308.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641400|dbj|BAI07355.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644455|dbj|BAI10403.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647510|dbj|BAI13451.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650563|dbj|BAI16497.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653554|dbj|BAI19481.1| DNA polymerase III gamma/tau subunit [Acetobacter pasteurianus IFO 3283-12] Length = 657 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 17/160 (10%) Query: 20 SFAIGENALPRNISSD--ECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDY 77 S + G P + S + A A ++ + L + + Sbjct: 458 SVSAGHQPPPLRMVSGGGQSVSAAVPVAAPVPMPSVEPQALPHPRTWREAVALVKDQKEA 517 Query: 78 KMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRC--- 134 + L+ H+VSF G + + F + +P + L L TG W + S Sbjct: 518 ILHGQLRHAAHLVSFAPGHIVLRFEQHVPAGAAQELRKVLDRATGMSWRVGLSEEEGEPT 577 Query: 135 ------------CEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 + E +KA+ FP A++ +R Sbjct: 578 LDAQGAEIIQFRRKEAEAHPLVKAILKFFPDAELGEVRDH 617 >gi|315121979|ref|YP_004062468.1| DNA polymerase III subunits gamma and tau [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495381|gb|ADR51980.1| DNA polymerase III subunits gamma and tau [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 151 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 68/135 (50%), Positives = 95/135 (70%), Gaps = 1/135 (0%) Query: 28 LPRNISSDECFPLAEAGITEKQDVLN-RLSACTPDNYTKQLIELCEKNHDYKMVEMLQRF 86 + ++I S++ FP + + EK ++L+ LS+ D+Y ++L ELCE NHD + EM Q+F Sbjct: 13 IQKDIPSNKSFPSGDNEVVEKPNMLSVELSSRASDDYMERLTELCENNHDDNLKEMSQKF 72 Query: 87 LHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYFEIDSDIKA 146 L V FE+G LEV+ K+ PE F+ENL LKNWTG++WEIRF+L +C + F I +DI+A Sbjct: 73 LRVFYFEIGILEVACSKDAPEGFVENLVKNLKNWTGKNWEIRFALEQCYDNFRIGADIQA 132 Query: 147 VRTIFPTAQVVCIRT 161 VR IFP AQVV IRT Sbjct: 133 VRAIFPNAQVVSIRT 147 >gi|58584691|ref|YP_198264.1| DNA polymerase III, gamma/tau subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419007|gb|AAW71022.1| DNA polymerase III, gamma/tau subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 494 Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 53/139 (38%), Gaps = 9/139 (6%) Query: 27 ALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRF 86 + + + + +++ + ++++L ++N+ + + L Sbjct: 361 SPEQVVKKVLAQSTQQRNTRSAENIQQKSYD------FDKILQLLQQNNQIYLYKQLCSN 414 Query: 87 LHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG---RCCEYFEIDSD 143 L +V+ + G L++ + ++ +F +L L T ++W I G + Sbjct: 415 LQLVNCKPGYLKLKAVSQLDSNFCNDLKNYLSQITQQEWVITIDAGYIKKGASSLSYAPA 474 Query: 144 IKAVRTIFPTAQVVCIRTI 162 +K + F A+VV I Sbjct: 475 VKGILDTFKGAKVVNIENK 493 >gi|296533586|ref|ZP_06896154.1| DNA polymerase III, gamma/tau subunit DnaX [Roseomonas cervicalis ATCC 49957] gi|296266094|gb|EFH12151.1| DNA polymerase III, gamma/tau subunit DnaX [Roseomonas cervicalis ATCC 49957] Length = 174 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 16/124 (12%) Query: 53 NRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 +A ++++ L + L +H+V+F LGR+E P D Sbjct: 12 PEPAALPQPRSFREVVALASG-RAPMLHAHLLHSVHLVNFALGRIEFRQDPRAPRDLAAQ 70 Query: 113 LATKLKNWTGEDWEIRFSLGRCC---------------EYFEIDSDIKAVRTIFPTAQVV 157 L+ L TG W I S E + ++A+ FP AQ Sbjct: 71 LSALLAEQTGTRWTISLSNAEGEPTLAQQRSHIASERLEIAKSHPLVQAILLAFPGAQAD 130 Query: 158 CIRT 161 +R Sbjct: 131 ALRD 134 >gi|114798398|ref|YP_759102.1| DNA polymerase III subunits gamma and tau [Hyphomonas neptunium ATCC 15444] gi|114738572|gb|ABI76697.1| DNA polymerase III, subunits gamma and tau [Hyphomonas neptunium ATCC 15444] Length = 578 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 19/144 (13%) Query: 40 LAEAGITEKQDVLNRLSACTP---DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGR 96 +AE +D + +I + + + +RF+ FE G+ Sbjct: 413 IAEGSRPPGKDNPPLKAPPQAPGGIESFADMIAIMVAAREVGLQVDTERFVRPSHFEPGK 472 Query: 97 LEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYF---------------EID 141 L + P+ + L L+ ++ DW + E + D Sbjct: 473 LACALAPGAPQGLLGRLKIFLETYSDLDWSVE-EADTDTESVRERERREKAERIESAKQD 531 Query: 142 SDIKAVRTIFPTAQVVCIRTIPNL 165 + A + P A ++ + P L Sbjct: 532 PRVAAALALIPGAIILDVEDPPEL 555 >gi|24475504|dbj|BAC22717.1| dnaX [Wolbachia endosymbiont of Callosobruchus chinensis] Length = 516 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 4/133 (3%) Query: 34 SDECFPLAEAGITEKQDVLNRLSACTPDNY-TKQLIELCEKNHDYKMVEMLQRFLHVVSF 92 S E +Q + + NY ++++L +++ + + L L ++ Sbjct: 383 SPEQVVKKILSQNAQQGNTHSIGNGQQQNYDFDKVLQLLRRSNQIYLYKQLCNNLQLIDC 442 Query: 93 ELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG---RCCEYFEIDSDIKAVRT 149 + G L++ + ++ +F +L L T ++W I G R +K + Sbjct: 443 KPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQEWVITVDTGYINREVSNLNYAPAVKDILD 502 Query: 150 IFPTAQVVCIRTI 162 F A+VV I Sbjct: 503 TFKGAKVVNIENK 515 >gi|225630794|ref|YP_002727585.1| DNA polymerase III, gamma/tau subunit [Wolbachia sp. wRi] gi|225592775|gb|ACN95794.1| DNA polymerase III, gamma/tau subunit [Wolbachia sp. wRi] Length = 533 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 58/151 (38%), Gaps = 6/151 (3%) Query: 15 ALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKN 74 A + S + + + P+ + P + +D + + ++++L ++ Sbjct: 385 APSPSVIQVADYSDPKKYVESKQQPH---SVIPVRDTGIHVENKQQNYDFDKILQLLRRS 441 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG-- 132 + + + L L ++ + G L++ + ++ +F +L L T ++W I G Sbjct: 442 NQIYLYKQLCNNLQLIDCKPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQEWVIAVDTGYI 501 Query: 133 -RCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 R +K + F A+VV I Sbjct: 502 NREVSNLNYAPAVKDILDTFKGAKVVNIENK 532 >gi|42520868|ref|NP_966783.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410608|gb|AAS14717.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Drosophila melanogaster] Length = 533 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 58/151 (38%), Gaps = 6/151 (3%) Query: 15 ALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKN 74 A + S + + + P+ + P + +D + + ++++L ++ Sbjct: 385 APSPSVIQVADYSDPKKYVESKQQPH---SVIPVRDTGIHVENKQQNYDFDKILQLLRRS 441 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG-- 132 + + + L L ++ + G L++ + ++ +F +L L T ++W + G Sbjct: 442 NQIYLYKQLCNNLQLIDCKPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQEWVVAVDTGYI 501 Query: 133 -RCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 R +K + F A+VV I Sbjct: 502 NREVSNLNYAPAVKDILDTFKGAKVVNIENK 532 >gi|111035803|emb|CAL29430.1| DNA polymerase III tau subunit [Wolbachia endosymbiont of Onchocerca volvulus] Length = 494 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 54/131 (41%), Gaps = 3/131 (2%) Query: 35 DECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL 94 ++ A T ++D+ N + + ++++L +++ + + L L +V + Sbjct: 363 EQVIKKILAQNTRQRDIYNIGNTQQENYDFDKILQLLRQDNQVYLYKQLCNNLQLVDCKP 422 Query: 95 GRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG---RCCEYFEIDSDIKAVRTIF 151 G L + + ++ +F +L L T + W + +G R +K + F Sbjct: 423 GYLRLKAVSQLDSNFCNDLKNYLDQVTQQQWLVTVDVGYINREISNLNHVPTVKGILDTF 482 Query: 152 PTAQVVCIRTI 162 A++V I + Sbjct: 483 KGAKIVNIESK 493 >gi|99034677|ref|ZP_01314618.1| hypothetical protein Wendoof_01000560 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 223 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 58/151 (38%), Gaps = 6/151 (3%) Query: 15 ALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKN 74 A + S + + + P+ + P + +D + + ++++L ++ Sbjct: 75 APSPSVIQVADYSDPKKYVESKQQPH---SVIPVRDTGIHVENKQQNYDFDKILQLLRRS 131 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG-- 132 + + + L L ++ + G L++ + ++ +F +L L T ++W + G Sbjct: 132 NQIYLYKQLCNNLQLIDCKPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQEWVVAVDTGYI 191 Query: 133 -RCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 R +K + F A+VV I Sbjct: 192 NREVSNLNYAPAVKDILDTFKGAKVVNIENK 222 >gi|58699590|ref|ZP_00374291.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Drosophila ananassae] gi|58533894|gb|EAL58192.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Drosophila ananassae] Length = 269 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 58/151 (38%), Gaps = 6/151 (3%) Query: 15 ALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKN 74 A + S + + + P+ + P + +D + + ++++L ++ Sbjct: 121 APSPSVIQVADYSDPKKYVESKQQPH---SVIPVRDTGIHVENKQQNYDFDKILQLLRRS 177 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG-- 132 + + + L L ++ + G L++ + ++ +F +L L T ++W I G Sbjct: 178 NQIYLYKQLCNNLQLIDCKPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQEWVIAVDTGYI 237 Query: 133 -RCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 R +K + F A+VV I Sbjct: 238 NREVSNLNYAPAVKDILDTFKGAKVVNIENK 268 >gi|225629565|ref|ZP_03787596.1| DNA polymerase III, gamma/tau subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591580|gb|EEH12589.1| DNA polymerase III, gamma/tau subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 247 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 57/151 (37%), Gaps = 6/151 (3%) Query: 15 ALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKN 74 A + S + + + P+ + P + D + + ++++L ++ Sbjct: 99 APSPSVIQVADYSDPKKYVESKQQPH---SVIRVADTGIHVENKQQNYDFDKILQLLRRS 155 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG-- 132 + + + L L ++ + G L++ + ++ +F +L L T ++W I G Sbjct: 156 NQIYLYKQLCNNLQLIDCKPGYLKLKAVSKLDSNFCNDLKNYLSQVTQQEWVIAVDTGYI 215 Query: 133 -RCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 R +K + F A+VV I Sbjct: 216 NREVSNLNYAPAVKDILDTFKGAKVVNIENK 246 >gi|190571334|ref|YP_001975692.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018730|ref|ZP_03334538.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357606|emb|CAQ55047.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995681|gb|EEB56321.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 527 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 11/163 (6%) Query: 11 KKLDALNVSSFAIGENALPRNISSDECFPLAEAGI--------TEKQDVLNRLSACTPDN 62 KK+ + NV + + S + ++ +D + + Sbjct: 364 KKILSQNVEQGNRQGRPVAPSPSVIQVTDYSDPKKYVEKPHSVIPVRDTGIHVKNKQQNY 423 Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++++L +++ + + L L ++ + G L++ + + +F +L + L T Sbjct: 424 DFDKILQLLRRSNQIYLYKQLCSNLKLIDCKFGYLKLKAVSNLNSNFCNDLKSYLNQATN 483 Query: 123 EDWEIRFS---LGRCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 ++W I + R +K + F A+VV I Sbjct: 484 QEWVIIVDTSYMNREVSNLNYAPVVKDILNTFKGAKVVNIENK 526 >gi|307292717|ref|ZP_07572563.1| DNA polymerase III, subunits gamma and tau [Sphingobium chlorophenolicum L-1] gi|306880783|gb|EFN11999.1| DNA polymerase III, subunits gamma and tau [Sphingobium chlorophenolicum L-1] Length = 538 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 18/133 (13%) Query: 43 AGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFL 102 G + N SA P + LIEL + ++ + L+ + + LE+ Sbjct: 398 PGQAPQSAPSNAPSAQLP-ASFEDLIELLYRRGRGQLSQHLKDCAGLSHYAPPLLEIRLT 456 Query: 103 K--EIPEDFIENLATKLKNWTGEDWEIRFSLG-----------RCCEYFEI----DSDIK 145 DF A LK+ TG W++R + G R E +K Sbjct: 457 DPWHGEGDFFRETARALKDITGIHWQVRQAEGPVAPTLMEQENRQREDARAAIMETPVVK 516 Query: 146 AVRTIFPTAQVVC 158 A FP A++ Sbjct: 517 AALAAFPDAELSD 529 >gi|241762403|ref|ZP_04760482.1| DNA polymerase III, subunits gamma and tau [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373090|gb|EER62739.1| DNA polymerase III, subunits gamma and tau [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 628 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 49/167 (29%), Gaps = 18/167 (10%) Query: 7 KKRKKKLDALNVSSFAIGENALPRNISSDECF-PLAEAGITEKQDVLNRLSACTPDN-YT 64 KK D N S A + N E Sbjct: 455 KKDFSPFDDDNNSRVAASGYPVEGNQKFSELPENQPRPSAIPIAPASEAKLKNPHFPPDF 514 Query: 65 KQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGED 124 K L E+ N + L+ + ++ + RL + I + + L+ LKN TG+ Sbjct: 515 KSLTEMLFDNGHALLGHSLEDYGRLIEYNPPRLLLENHSRISGETRQELSLALKNLTGQA 574 Query: 125 WEIRFSLGRCCE----------------YFEIDSDIKAVRTIFPTAQ 155 W++ F R + ++AV FP A+ Sbjct: 575 WQVEFLQDRKGQPSFREAEIAQKEARQKAILNTPIVQAVLKTFPDAE 621 >gi|330993788|ref|ZP_08317720.1| DNA polymerase III subunit tau [Gluconacetobacter sp. SXCC-1] gi|329759056|gb|EGG75568.1| DNA polymerase III subunit tau [Gluconacetobacter sp. SXCC-1] Length = 690 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 17/146 (11%) Query: 34 SDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFE 93 E P ++ TP ++ + D + L+ H+VSF Sbjct: 505 RVEGTPRPTPQPGRVEETAPVPPPVTPPRTWREAVAFVSG-RDAMLHGHLRHATHLVSFA 563 Query: 94 LGRLEVSFLKEIPEDFIENLATKLKNWTGE-DWEIRFS--------LGRCCE-------Y 137 +E+ + L T L+ TG+ W++R S + E Sbjct: 564 PPLIEIRVERNSLPGLARRLETLLREGTGDGTWQVRLSDAPGEATLAEQGAEIIQLHRAA 623 Query: 138 FEIDSDIKAVRTIFPTAQVVCIRTIP 163 E ++A +FPTA++ + Sbjct: 624 AEAHPLVQAAMQVFPTARLGEVTDHA 649 >gi|294012157|ref|YP_003545617.1| DNA polymerase III gamma and tau subunit [Sphingobium japonicum UT26S] gi|292675487|dbj|BAI97005.1| DNA polymerase III gamma and tau subunit [Sphingobium japonicum UT26S] Length = 536 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 15/111 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++LIE + ++ + L + VV + L+ + +P DF+ L L+ TG Sbjct: 417 SFEELIEAFWQRGKGQLAQELHDCIGVVRYAAPELDYAPTPSLPSDFLARLTPALREVTG 476 Query: 123 EDWEIRFSLGRCCEY---------------FEIDSDIKAVRTIFPTAQVVC 158 W + G +KA FP A++ Sbjct: 477 TAWRVNAVDGPAAPTLLEQEMRKAADARAEIMETPVVKAALAAFPDAELGD 527 >gi|161611320|ref|YP_162596.2| DNA polymerase III subunits gamma and tau [Zymomonas mobilis subsp. mobilis ZM4] gi|283775348|gb|AAV89485.2| DNA polymerase III, subunits gamma and tau [Zymomonas mobilis subsp. mobilis ZM4] Length = 628 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 49/167 (29%), Gaps = 18/167 (10%) Query: 7 KKRKKKLDALNVSSFAIGENALPRNISSDECF-PLAEAGITEKQDVLNRLSACTPDN-YT 64 KK D N S A + + N E Sbjct: 455 KKDFSPFDDDNNSRVAASDYPVEGNQKFSELPENQPRPSAIPIAPASEAKLKNPHFPPDF 514 Query: 65 KQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGED 124 K L E+ N + L+ + ++ + RL + I + + L+ LKN T + Sbjct: 515 KSLTEMLFDNGHALLGHSLEDYGRLIEYNPPRLLLENHSRISGETRQELSLALKNLTKQA 574 Query: 125 WEIRFSLGRCCE----------------YFEIDSDIKAVRTIFPTAQ 155 W++ F R + ++AV FP A+ Sbjct: 575 WQVEFLQDRKGQPSFREAEIAQKEARQKAILNTPIVQAVLKTFPDAE 621 >gi|6466222|gb|AAF12838.1|AF203881_11 DNA polymerase III subunits tau and gamma [Zymomonas mobilis subsp. mobilis ZM4] Length = 597 Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 49/167 (29%), Gaps = 18/167 (10%) Query: 7 KKRKKKLDALNVSSFAIGENALPRNISSDECF-PLAEAGITEKQDVLNRLSACTPDN-YT 64 KK D N S A + + N E Sbjct: 424 KKDFSPFDDDNNSRVAASDYPVEGNQKFSELPENQPRPSAIPIAPASEAKLKNPHFPPDF 483 Query: 65 KQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGED 124 K L E+ N + L+ + ++ + RL + I + + L+ LKN T + Sbjct: 484 KSLTEMLFDNGHALLGHSLEDYGRLIEYNPPRLLLENHSRISGETRQELSLALKNLTKQA 543 Query: 125 WEIRFSLGRCCE----------------YFEIDSDIKAVRTIFPTAQ 155 W++ F R + ++AV FP A+ Sbjct: 544 WQVEFLQDRKGQPSFREAEIAQKEARQKAILNTPIVQAVLKTFPDAE 590 >gi|260752672|ref|YP_003225565.1| DNA polymerase III subunits gamma/tau [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552035|gb|ACV74981.1| DNA polymerase III, subunits gamma and tau [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 628 Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%) Query: 5 SWKKRKKK----LDALNVSSFAIGENALPRNISSDECF-PLAEAGITEKQDVLNRLSACT 59 S + +KK D N S A + + E Sbjct: 449 SLQPTEKKYFSSFDDDNNSRMAASDYPVEGKQKFSELPENQPRPSAIPIAPASEAKLKNP 508 Query: 60 PDN-YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLK 118 K L E+ N + L+ + ++ + RL + I + + L+ LK Sbjct: 509 HFPPDFKSLTEMLFDNGHALLGHSLEDYGRLIEYNPPRLLLENHSRISGETRQELSLALK 568 Query: 119 NWTGEDWEIRFSLGRCCE----------------YFEIDSDIKAVRTIFPTAQ 155 N T + W++ F R + ++AV FP A+ Sbjct: 569 NLTKQAWQVEFLQDRKGQPSFREAEIAQKEARQKAILNTPIVQAVLKTFPDAE 621 >gi|58699392|ref|ZP_00374154.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Drosophila ananassae] gi|58534090|gb|EAL58327.1| DNA polymerase III, gamma and tau subunits [Wolbachia endosymbiont of Drosophila ananassae] Length = 99 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Query: 68 IELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEI 127 ++L +++ + + L L ++ + G L++ + ++ +F +L L T ++W I Sbjct: 1 MQLLRRSNQIYLYKQLCNNLQLIDCKPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQEWVI 60 Query: 128 RFSLG---RCCEYFEIDSDIKAVRTIFPTAQVVCIRTI 162 G R +K + F A+VV I Sbjct: 61 AVDTGYINREVSNLNYAPAVKDILDTFKGAKVVNIENK 98 >gi|58039074|ref|YP_191038.1| DNA polymerase III subunits gamma and tau [Gluconobacter oxydans 621H] gi|58001488|gb|AAW60382.1| DNA polymerase III subunit gamma/tau [Gluconobacter oxydans 621H] Length = 652 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 41/116 (35%), Gaps = 18/116 (15%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN-WT 121 ++++ + + + + +L+ +H+V F +++ + L L + Sbjct: 497 TWREMVAMVAREREPVLHGLLRNAVHLVRFSPPDVQIRAEEPQAR-IERQLQKLLDRVYP 555 Query: 122 GEDWEIRFS--LGRCCEYF-------------EIDSDIKAVRTIFPTAQVVCIRTI 162 G+ W + S G E ++A+ FP A++ ++ Sbjct: 556 GQ-WRVSASTAPGEPTLDEQGAEVVALNQASVEQHPLVQAILKTFPGAKIGEVQDH 610 >gi|103486288|ref|YP_615849.1| DNA polymerase III subunits gamma and tau [Sphingopyxis alaskensis RB2256] gi|98976365|gb|ABF52516.1| DNA polymerase III, subunits gamma and tau [Sphingopyxis alaskensis RB2256] Length = 565 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 15/111 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 Q+ L E +++ + L ++ E GRL + + + DF L L TG Sbjct: 445 TIAQIHRLLESTGHHQLARQVYDDLRILELEPGRLVYAPVSALDGDFARRLGEALFGQTG 504 Query: 123 EDWEI---------RFSLGRCCEYFEID------SDIKAVRTIFPTAQVVC 158 W++ + + + + + +KA FP A++V Sbjct: 505 SRWQVREGTGEGRPSLAQMKAAQRADNEARIRELPVVKAALAAFPDARLVE 555 >gi|94497479|ref|ZP_01304049.1| DNA polymerase III, subunits gamma and tau [Sphingomonas sp. SKA58] gi|94423110|gb|EAT08141.1| DNA polymerase III, subunits gamma and tau [Sphingomonas sp. SKA58] Length = 538 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 17/112 (15%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 LIE + ++ + L + V+ + + + ++P DF+ L L+ TG Sbjct: 419 TYADLIEAFWQGGKGQLAQELHDCVGVIRYAPPQFDYRPTPQLPADFLARLLPALREVTG 478 Query: 123 EDWEIRFSLGRCCE----------------YFEIDSDIKAVRTIFPTAQVVC 158 W++ + E +KA FP A++ Sbjct: 479 TAWQVA-AGEGPAEPTLLEQEQRQAADTRARILETPVVKAAMAAFPDAELDD 529 >gi|209545026|ref|YP_002277255.1| DNA polymerase III subunits gamma and tau [Gluconacetobacter diazotrophicus PAl 5] gi|209532703|gb|ACI52640.1| DNA polymerase III, subunits gamma and tau [Gluconacetobacter diazotrophicus PAl 5] Length = 687 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 16/115 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++++ D + L+ H+V F R+ + + L T L+ TG Sbjct: 532 TWREVVAFVSG-RDAMLHGHLRHSTHLVEFAPPRIAIRVDRAGLPGLTRRLETLLRRETG 590 Query: 123 EDWEIRFS--LGRCCEYF-------------EIDSDIKAVRTIFPTAQVVCIRTI 162 + WE+R S G+ E ++A+ FP A + + Sbjct: 591 QAWEVRASTEAGQPTLAEQGAEIIQFHRAAAEAHPLVRAIFARFPDAILGAVTDH 645 >gi|162149236|ref|YP_001603697.1| DNA polymerase III subunits gamma and tau [Gluconacetobacter diazotrophicus PAl 5] gi|161787813|emb|CAP57411.1| putative DNA polymerase III tau subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 629 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 16/115 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++++ D + L+ H+V F R+ + + L T L+ TG Sbjct: 474 TWREVVAFVSG-RDAMLHGHLRHSTHLVEFAPPRIAIRVDRAGLPGLTRRLETLLRRETG 532 Query: 123 EDWEIRFS--LGRCCEYF-------------EIDSDIKAVRTIFPTAQVVCIRTI 162 + WE+R S G+ E ++A+ FP A + + Sbjct: 533 QAWEVRASTEAGQPTLAEQGAEIIQFHRAAAEAHPLVRAIFARFPDAILGAVTDH 587 >gi|87199378|ref|YP_496635.1| DNA polymerase III subunits gamma and tau [Novosphingobium aromaticivorans DSM 12444] gi|87135059|gb|ABD25801.1| DNA polymerase III, subunits gamma and tau [Novosphingobium aromaticivorans DSM 12444] Length = 573 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 15/87 (17%) Query: 87 LHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLG-------------- 132 + +V + G L +P D ++ L + TGE W + + G Sbjct: 471 VRLVDLKPGLLRYQLAPGLPGDPAPDIRRALNHVTGEAWIVERAEGVAQPSLEEVKAAKA 530 Query: 133 -RCCEYFEIDSDIKAVRTIFPTAQVVC 158 + D +KA FP A ++ Sbjct: 531 VAADAAMKEDPLVKAALEAFPGAVIID 557 >gi|326385522|ref|ZP_08207161.1| DNA polymerase III subunits gamma and tau [Novosphingobium nitrogenifigens DSM 19370] gi|326210061|gb|EGD60839.1| DNA polymerase III subunits gamma and tau [Novosphingobium nitrogenifigens DSM 19370] Length = 622 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 17/120 (14%) Query: 56 SACTPDNYTKQLIELCEKNHDY--KMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENL 113 S+ + + ++ + L EK ++ + VV G L +P D ++ Sbjct: 488 SSISEEALLEEWVSLVEKVEHVSPLTGSTMRLAIRVVRLTPGYLAYELAPGVPGDPGPDI 547 Query: 114 ATKLKNWTGEDWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVC 158 L+ TGE W++ S G+ + + +KAV FP A+++ Sbjct: 548 RRGLEAATGERWQVERSEGKGRPSLEEARAARVAAEEAAMQENPLVKAVLAAFPQARIID 607 >gi|254293230|ref|YP_003059253.1| DNA polymerase III subunits gamma and tau [Hirschia baltica ATCC 49814] gi|254041761|gb|ACT58556.1| DNA polymerase III, subunits gamma and tau [Hirschia baltica ATCC 49814] Length = 619 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 14/129 (10%) Query: 49 QDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPED 108 D + Q+ + + ++ ++ ++ G + IP D Sbjct: 467 PDKYAEAAPGPVLGSLNQICAALQGDKQIHLLYDVEHYVRPAEVRYGLFTYAAAPGIPVD 526 Query: 109 FIENLATKLKNWTGEDWEIRF--SLGRCCEYFE------------IDSDIKAVRTIFPTA 154 F + L++ TG +W + S E I + P A Sbjct: 527 FQMRMKNWLEDKTGVEWNVDLGHSTKESLEEIRVRQEKERVAEVSAIPRIAEALELLPGA 586 Query: 155 QVVCIRTIP 163 +VV I + Sbjct: 587 KVVKIEKLD 595 >gi|85708099|ref|ZP_01039165.1| DNA polymerase III subunits gamma and tau [Erythrobacter sp. NAP1] gi|85689633|gb|EAQ29636.1| DNA polymerase III subunits gamma and tau [Erythrobacter sp. NAP1] Length = 601 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 39/119 (32%), Gaps = 17/119 (14%) Query: 57 ACTPDNYTK--QLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLA 114 + + + L++ + ++ +M++ + V+ +L +D ++ Sbjct: 467 SSSVYASFEWGALVDQIDNAGQLRVAQMMRDRIRVIELAPEKLIFEQADNYSDDPAPDIR 526 Query: 115 TKLKNWTGEDWEI---------RFSLGRCCEY------FEIDSDIKAVRTIFPTAQVVC 158 L TG+ W + E + +KA FP A++V Sbjct: 527 DALFKLTGKRWLVERGSGDAQPSLREAADAEAQATQDRIRANPLVKAAFEAFPDAELVD 585 >gi|332185894|ref|ZP_08387641.1| DNA polymerase III, subunits gamma and tau [Sphingomonas sp. S17] gi|332014252|gb|EGI56310.1| DNA polymerase III, subunits gamma and tau [Sphingomonas sp. S17] Length = 559 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 15/111 (13%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 +I+ + + L+ +V + + S + I D + L + LK TG Sbjct: 439 SFVAMIDRLDDMGQLALAARLRHGARLVRYTPPEMVFSGSRPIAADTLSELVSALKTATG 498 Query: 123 EDWEIRFS--LGRCCEYFEI-------------DSDIKAVRTIFPTAQVVC 158 + W I G + + ++A R FP A+++ Sbjct: 499 QIWRITLEDVPGEPTLHEQQVAAEEAIKTAAWESDMVRAAREAFPEAELME 549 >gi|296116792|ref|ZP_06835398.1| DNA polymerase III subunits gamma and tau [Gluconacetobacter hansenii ATCC 23769] gi|295976593|gb|EFG83365.1| DNA polymerase III subunits gamma and tau [Gluconacetobacter hansenii ATCC 23769] Length = 690 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 17/129 (13%) Query: 51 VLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFI 110 + + A ++++ D + L+ H+V+F + + Sbjct: 524 PVPAIPAAPQLRTWREVVAFVSG-RDAMLHGHLRHSTHLVAFAAPEIRIRVEAAAMAGLA 582 Query: 111 ENLATKLKNWTGED-WEIRF--SLGRCCEYFE-------------IDSDIKAVRTIFPTA 154 L T L+ TG+ W+IR G + +KAV FP+A Sbjct: 583 RRLETLLRAETGDPSWKIRTCEDEGEATLAEQGAEIIQLHRADAASHPLVKAVMAAFPSA 642 Query: 155 QVVCIRTIP 163 ++ + Sbjct: 643 RLGQVTDHA 651 >gi|73667555|ref|YP_303571.1| DNA-directed DNA polymerase [Ehrlichia canis str. Jake] gi|72394696|gb|AAZ68973.1| DNA-directed DNA polymerase [Ehrlichia canis str. Jake] Length = 491 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 8/133 (6%) Query: 39 PLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEML-QRFLHVVSFELGRL 97 PL + N + DNY ++L+EL + N+ + + + L + ++ G L Sbjct: 356 PLPSPKQIIDKIQDNIKTNNKSDNYKEELLELLKVNNMQDLYNQIYESDLEITNYNDGIL 415 Query: 98 EVSFLKEIPEDFIENLATKLKNWTGEDWEIRFSLGRCCEYFEI-------DSDIKAVRTI 150 + + +D +L+ L + T + W I +S + + Sbjct: 416 NIKANNTLSKDLHNDLSNFLNSSTNKKWNISIEQNFNINKNSNTCYNQSFNSTVCNILQE 475 Query: 151 FPTAQVVCIRTIP 163 F A+VV I I Sbjct: 476 FDGAKVVNIENIK 488 >gi|148552984|ref|YP_001260566.1| DNA polymerase III subunits gamma and tau [Sphingomonas wittichii RW1] gi|148498174|gb|ABQ66428.1| DNA polymerase III, subunits gamma and tau [Sphingomonas wittichii RW1] Length = 582 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 15/85 (17%) Query: 89 VVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEIR----------FSLGRCCEYF 138 +V E L ++ + +P++F ++A LK TG W + + R E Sbjct: 487 IVRLEGEELLIARHQRLPQNFAGDVANILKRSTGRTWSVAMVDEAGAPSLLARIRAEEDA 546 Query: 139 EID-----SDIKAVRTIFPTAQVVC 158 D +KA FP A+++ Sbjct: 547 ARDAILESPLVKAALEAFPDAELID 571 >gi|289610813|emb|CBI60172.1| unnamed protein product [Sordaria macrospora] Length = 88 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%) Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 +Q++ L K+ + + + ++ E +E+S + +P DF +L LK TG Sbjct: 23 TMEQVVNLLAKHGRHSLEAQFRNCARMIRLEPNLIELSGSRPLPADFARDLENALKGITG 82 Query: 123 EDWEI 127 W + Sbjct: 83 SHWRV 87 >gi|162007986|ref|YP_457625.2| DNA polymerase III subunits gamma and tau [Erythrobacter litoralis HTCC2594] Length = 575 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 16/110 (14%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 L++ E+ +++ L V+ E RL S E+ L L TG+ Sbjct: 450 FASLVDRVEQAGHGFAASIMRLQLRVIECEERRLVFSRASSYTEEIAPQLREALLAATGQ 509 Query: 124 DWEI----------RFSLGRCCEYFEI------DSDIKAVRTIFPTAQVV 157 W++ E + A +T FP A+++ Sbjct: 510 RWQLEERDWVDAPPSLMEQAEAREEEKKARIDGHPLVAATKTAFPDAEII 559 >gi|84786646|gb|ABC62828.1| DNA polymerase III tau subunit [Erythrobacter litoralis HTCC2594] Length = 521 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 16/110 (14%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 L++ E+ +++ L V+ E RL S E+ L L TG+ Sbjct: 396 FASLVDRVEQAGHGFAASIMRLQLRVIECEERRLVFSRASSYTEEIAPQLREALLAATGQ 455 Query: 124 DWEI----------RFSLGRCCEYFEI------DSDIKAVRTIFPTAQVV 157 W++ E + A +T FP A+++ Sbjct: 456 RWQLEERDWVDAPPSLMEQAEAREEEKKARIDGHPLVAATKTAFPDAEII 505 >gi|296284716|ref|ZP_06862714.1| DNA polymerase III subunits gamma and tau [Citromicrobium bathyomarinum JL354] Length = 606 Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 16/111 (14%) Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 L+ E +Y +++ L VVS E G L + E + L L TG Sbjct: 479 FASLVAKVEDAGEYIAASIMRLQLRVVSLEDGALTFARAPEFRDKIETELRAALAKATGR 538 Query: 124 DWEIRFSLGRCC----------------EYFEIDSDIKAVRTIFPTAQVVC 158 W + + E ++A R FP A+++ Sbjct: 539 SWVLTEVEDPAAPPSMAESAQAEAAALRDAMEAHPLMQAARAAFPQAELLD 589 >gi|67809793|gb|AAY81977.1| DNA polymerase III gamma and tau subunit [Wolbachia pipientis] Length = 446 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 43/109 (39%), Gaps = 3/109 (2%) Query: 15 ALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKN 74 + S + + + P+ + P + +D + + ++++L ++ Sbjct: 340 TPSPSVIQVADYSDPKKYVESKQQPH---SVIPVRDTGIHVENKQQNYDFDKILQLLRRS 396 Query: 75 HDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGE 123 + + + L L ++ + G L++ + ++ +F +L L T + Sbjct: 397 NQIYLYKQLCNNLQLIDCKPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQ 445 >gi|157826506|ref|YP_001495570.1| DNA polymerase III subunits gamma and tau [Rickettsia bellii OSU 85-389] gi|157801810|gb|ABV78533.1| DNA polymerase III subunits gamma and tau [Rickettsia bellii OSU 85-389] Length = 508 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 59/167 (35%), Gaps = 12/167 (7%) Query: 3 AISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDN 62 +I W+ K + + +S + E + I S L L + S Sbjct: 340 SILWQIYSKGIAEIKISYNQLIETEM-LIIKSIYSASLPLDDSPSDNRDLKQPSTEEIKK 398 Query: 63 YTK--QLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + ++ +N++ ++ L + + +F +LE+ + + + + L + Sbjct: 399 KFEIVDFLKYLYENNEIEIYYFLLNSIELKNFYDNKLEIVSSEITSK-IKKQIENLLFAF 457 Query: 121 TGEDWEIRFSLGRC--------CEYFEIDSDIKAVRTIFPTAQVVCI 159 + E EI S + + E ++ FP A+++ I Sbjct: 458 SNEKIEIIISKEQQQTTLKSQLTDKIESGDGFSLIKKHFPDAKIMDI 504 >gi|91204862|ref|YP_537217.1| DNA polymerase III subunits gamma and tau [Rickettsia bellii RML369-C] gi|91068406|gb|ABE04128.1| DNA polymerase III gamma and tau chains [Rickettsia bellii RML369-C] Length = 508 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 59/167 (35%), Gaps = 12/167 (7%) Query: 3 AISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDN 62 +I W+ K + + +S + E + I S L L + S Sbjct: 340 SILWQIYSKGVAEIKISYNQLIETEM-LIIKSIYSASLPLDDSPSDNRDLKQPSTEEIKK 398 Query: 63 YTK--QLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + ++ +N++ ++ L + + +F +LE+ + + + + L + Sbjct: 399 KFEIVDFLKYLYENNEIEIYYFLLNSIELKNFYDNKLEIVSSEITSK-IKKQIENLLFAF 457 Query: 121 TGEDWEIRFSLGRC--------CEYFEIDSDIKAVRTIFPTAQVVCI 159 + E EI S + + E ++ FP A+++ I Sbjct: 458 SNEKIEIIISKEQQQTTLKSQLTDKIESGDGFSLIKKHFPDAKIMDI 504 >gi|218660624|ref|ZP_03516554.1| DNA polymerase III subunits gamma and tau [Rhizobium etli IE4771] Length = 97 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 15/52 (28%) Query: 124 DWEIRFSLGRCCEYF---------------EIDSDIKAVRTIFPTAQVVCIR 160 W + S D D+ A+ FP A+++ +R Sbjct: 12 HWIVSTSREEGGPTMVEAEAKAQQQRVSDARQDPDVAAILAQFPGAKIIDVR 63 >gi|58617668|ref|YP_196867.1| DNA polymerase III gamma and tau chains [Ehrlichia ruminantium str. Gardel] gi|58417280|emb|CAI28393.1| DNA polymerase III gamma and tau chains [Ehrlichia ruminantium str. Gardel] Length = 500 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 2/123 (1%) Query: 43 AGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL-GRLEVSF 101 I EK + + + K L+ L + N+ + L + L +++ + Sbjct: 374 KQIIEKLQNNVKANENGLEINRKMLLALLKTNNMEDLYNQLSKSLLEITYNNDCTSNIIL 433 Query: 102 LKEIPEDFIENLATKLKNWTGEDWEIRFSLGR-CCEYFEIDSDIKAVRTIFPTAQVVCIR 160 +P + + L L N T + W I C ++DS I + F A+V+ I Sbjct: 434 NTILPNNSQKELLNFLSNLTSKKWNICIKKNNDPCYNSQLDSTISDILQEFDGAKVINIE 493 Query: 161 TIP 163 TI Sbjct: 494 TIK 496 >gi|149186799|ref|ZP_01865109.1| DNA polymerase III subunits gamma and tau [Erythrobacter sp. SD-21] gi|148829466|gb|EDL47907.1| DNA polymerase III subunits gamma and tau [Erythrobacter sp. SD-21] Length = 612 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 20/114 (17%) Query: 65 KQLIELCEKNHDYKMVEM--LQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 ++LIE K+ ++ + +S E+G+L + + + L L T Sbjct: 485 EELIEKVSAAG--KLQAESIMRLQIRPISVEMGKLVYTRDAKYGDAIEPVLKDALYAVTE 542 Query: 123 EDWEI----------RFSLGRCCEYFEI------DSDIKAVRTIFPTAQVVCIR 160 W++ R + +KAV FP A+++ R Sbjct: 543 TRWQLETGDPALATPSLEEQRQAKAEAAKAAMKEHPMVKAVEAAFPDAEMIEDR 596 >gi|58579613|ref|YP_197825.1| DNA polymerase III gamma and tau chains [Ehrlichia ruminantium str. Welgevonden] gi|58418239|emb|CAI27443.1| DNA polymerase III gamma and tau chains [Ehrlichia ruminantium str. Welgevonden] Length = 500 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 2/123 (1%) Query: 43 AGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL-GRLEVSF 101 I EK + + + K L+ L + N+ + L + L +++ + Sbjct: 374 KQIIEKLQNNVKANENGLEINRKMLLALLKTNNMEDLYNQLSKSLLEITYNNDCTSNIIL 433 Query: 102 LKEIPEDFIENLATKLKNWTGEDWEIRFSLGR-CCEYFEIDSDIKAVRTIFPTAQVVCIR 160 +P + + L L N T + W I C +++S I + F A+V+ I Sbjct: 434 NTMLPNNSQKELLNFLSNLTSKKWNICIKKNNDPCYNSQLNSTISDILQEFDGAKVINIE 493 Query: 161 TIP 163 TI Sbjct: 494 TIK 496 >gi|168206740|ref|ZP_02632745.1| cell wall binding repeat/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium perfringens E str. JGS1987] gi|170661832|gb|EDT14515.1| cell wall binding repeat/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium perfringens E str. JGS1987] Length = 891 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 7/135 (5%) Query: 4 ISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNY 63 ++ K+ ++K D N ++ +N L +++ EK N++ A DN Sbjct: 77 MNGKESEEKKDNNNQDTYIEPKNNLDTENTNNNDNSKDWKKEVEKNRDENKIKAADEDNK 136 Query: 64 TK---QLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + L+ + + +F S E+ + + + +E+L L Sbjct: 137 VENKDDLVGSIYEKKSINLKPKFHQFF---SINNSENELKYEQIRDSNGLESLVR-LHPK 192 Query: 121 TGEDWEIRFSLGRCC 135 T + +EI + Sbjct: 193 TDKKYEIALAKNDGT 207 >gi|57238735|ref|YP_179871.1| DNA polymerase III gamma and tau chains [Ehrlichia ruminantium str. Welgevonden] gi|57160814|emb|CAH57712.1| putative DNA polymerase III, gamma subunit [Ehrlichia ruminantium str. Welgevonden] Length = 487 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 2/123 (1%) Query: 43 AGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFEL-GRLEVSF 101 I EK + + + K L+ L + N+ + L + L +++ + Sbjct: 361 KQIIEKLQNNVKANENGLEINRKMLLALLKTNNMEDLYNQLSKSLLEITYNNDCTSNIIL 420 Query: 102 LKEIPEDFIENLATKLKNWTGEDWEIRFSLGR-CCEYFEIDSDIKAVRTIFPTAQVVCIR 160 +P + + L L N T + W I C +++S I + F A+V+ I Sbjct: 421 NTMLPNNSQKELLNFLSNLTSKKWNICIKKNNDPCYNSQLNSTISDILQEFDGAKVINIE 480 Query: 161 TIP 163 TI Sbjct: 481 TIK 483 >gi|51474034|ref|YP_067790.1| DNA polymerase III subunits gamma and tau [Rickettsia typhi str. Wilmington] gi|51460346|gb|AAU04309.1| DNA nucleotidyltransferase (DNA-directed) [Rickettsia typhi str. Wilmington] Length = 507 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 9/118 (7%) Query: 50 DVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDF 109 +++N ++ N +E KN++ + L + RLE LK + Sbjct: 385 NIMNADNSGIKKNEILDFLEYLYKNNEIDIYYFLLNHTELKKLSDNRLEFCSLKVTNK-I 443 Query: 110 IENLATKLKNWTGED--WEIRFSLGRCCEY------FEIDSDIKAVRTIFPTAQVVCI 159 + + L +T E + + + E +D ++ FP ++ I Sbjct: 444 KKQIEDLLTAFTKEKPEFIVIKEQNKQTLKGQLINKIETSNDFSLIKKHFPNVKITDI 501 >gi|157826351|ref|YP_001494071.1| DNA polymerase III subunits gamma and tau [Rickettsia akari str. Hartford] gi|157800309|gb|ABV75563.1| DNA polymerase III subunits gamma and tau [Rickettsia akari str. Hartford] Length = 509 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 11/121 (9%) Query: 49 QDVLNRLSACTPDNYTK--QLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIP 106 LN+ + ++ KN++ + L + + RLE L+ Sbjct: 386 NQNLNQSINPEIKKNFEIVDFLKYLYKNNEIDIYYFLLNHAELKNLSDNRLEFCSLEIKS 445 Query: 107 EDFIENLATKLKNWTGED--WEIRFSLGRCCEYFEIDSDIKA------VRTIFPTAQVVC 158 + + + L ++T E + + + ++ I A ++ FP A++ Sbjct: 446 K-LKKQIEDLLADFTKEKCKFIVIKEQNKQTLKSQLIDKIAASNDFGLIKKHFPNAEISD 504 Query: 159 I 159 I Sbjct: 505 I 505 >gi|110803679|ref|YP_697919.1| cell wall binding repeat-containing protein/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium perfringens SM101] gi|110684180|gb|ABG87550.1| cell wall binding repeat/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium perfringens SM101] Length = 891 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 7/135 (5%) Query: 4 ISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNY 63 ++ K+ ++K D N + +N L +++ EK N++ A DN Sbjct: 77 MNGKESEEKKDNNNQDIYVEPKNNLDTENTNNNDNSKDWKKEVEKNRDENKIKAADEDNK 136 Query: 64 TK---QLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + L+ + + +F S E+ + + + +E+L L Sbjct: 137 VENKDDLVGSIYEKKSINLKPKFHQFF---SINNSENELKYEQIRDSNGLESLVR-LHPK 192 Query: 121 TGEDWEIRFSLGRCC 135 T + +EI + Sbjct: 193 TDKKYEIALAKDDGT 207 >gi|83310597|ref|YP_420861.1| hypothetical protein amb1498 [Magnetospirillum magneticum AMB-1] gi|82945438|dbj|BAE50302.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 114 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 141 DSDIKAVRTIFPTAQVVCIRTIP 163 ++AV FP A + +R IP Sbjct: 76 HPLVRAVLAHFPDATIDAVRPIP 98 >gi|118372090|ref|XP_001019242.1| hypothetical protein TTHERM_00849400 [Tetrahymena thermophila] gi|89301009|gb|EAR98997.1| hypothetical protein TTHERM_00849400 [Tetrahymena thermophila SB210] Length = 1644 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 46/119 (38%), Gaps = 8/119 (6%) Query: 5 SWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQ--------DVLNRLS 56 ++KK +K D ++ I + + + + + K+ D L + Sbjct: 156 TYKKAQKNFDNQTIAQTQIHAKKVDKEQQIQQNVVYEKTRGSSKKSFVSVELRDYLCGIK 215 Query: 57 ACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLAT 115 N +QL E C + + + F+++ F+ +E + + ++ ++NL+ Sbjct: 216 FDEGLNSLQQLYEKCLAQKENILKMLSNDFINLKDFKQKAIEYYNNRLLLQNTLKNLSR 274 >gi|300706971|ref|XP_002995714.1| hypothetical protein NCER_101322 [Nosema ceranae BRL01] gi|239604914|gb|EEQ82043.1| hypothetical protein NCER_101322 [Nosema ceranae BRL01] Length = 846 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 4/122 (3%) Query: 1 LHAISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTP 60 L S + K + + E + + PL E EK+D++ Sbjct: 407 LEKTSLEMDLKNTPNSEILLKKLEEIQKRIEVIKESMIPLEENYQNEKKDIIQAKELRKK 466 Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 T+ ++ E++ + L+ + + E +++ ++ I ++A K+ NW Sbjct: 467 LEDTRIKLQQAERDRQSYLAYDLKTNVIPI-LEEELTKLTGVEIIETH---HVAEKISNW 522 Query: 121 TG 122 TG Sbjct: 523 TG 524 >gi|221132437|ref|XP_002157712.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 590 Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 29/136 (21%) Query: 5 SWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTP---- 60 S KR KK+D+ +++ + + + + + EKQDVL T Sbjct: 143 SPTKRHKKIDSSSLTVIEANASQIKEHENKIKYLSDELRSKEEKQDVLKNKLEVTQKCII 202 Query: 61 -----------------DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLK 103 +++ K+L+E K + + + + ++ +E ++E Sbjct: 203 ESLEIQKFELEAEMLKGESHLKELLEHQLKEKEALLRAEFDQHICLLEYEKKKVE----- 257 Query: 104 EIPEDFIENLATKLKN 119 ++ + L+ KL Sbjct: 258 ---KNLQDELSNKLSE 270 >gi|15604695|ref|NP_221213.1| DNA polymerase III subunits gamma and tau [Rickettsia prowazekii str. Madrid E] gi|3861390|emb|CAA15289.1| DNA POLYMERASE III SUBUNITS GAMMA AND TAU (dnaX) [Rickettsia prowazekii] gi|292572530|gb|ADE30445.1| DNA polymerase III gamma and tau chains [Rickettsia prowazekii Rp22] Length = 541 Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 11/165 (6%) Query: 3 AISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDN 62 +I W+ K + + +S + E + I S L + + S Sbjct: 374 SILWQIYNKGVTEIKISYNQLIETEM-LVIKSIYSTSLPLLNDSNANIMNADNSGIKKIE 432 Query: 63 YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTG 122 +E KN++ + L + RLE+ L+ + + + L +T Sbjct: 433 IL-DFLEYLYKNNEIDIYYFLLNHTELKKLSDNRLELYSLE-VTHKLKKQIEDLLAAFTK 490 Query: 123 ED--WEIRFSLGRCCEY------FEIDSDIKAVRTIFPTAQVVCI 159 E + + + E +D ++ FP ++ I Sbjct: 491 EKPEFIVIKEQNKQTLKGQLINKIETSNDFSLIKKHFPNVKITDI 535 >gi|294139072|ref|YP_003555050.1| hypothetical protein SVI_0301 [Shewanella violacea DSS12] gi|293325541|dbj|BAJ00272.1| hypothetical protein [Shewanella violacea DSS12] Length = 1479 Score = 36.9 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 11/113 (9%) Query: 50 DVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDF 109 DV N S N+ EL D Q + + S + ++ +F +IP Sbjct: 880 DVPNTSSCKDTANF-----ELFAVKKD----SQTQECVPLFSNQTKAIDFNFEYKIPSSV 930 Query: 110 IENLATKLKNWTGEDWEIRFSLGR-CCEYFEIDSDIKAVRTI-FPTAQVVCIR 160 + L + G ++ + G D D KAV +P A VV ++ Sbjct: 931 NNEASLTLSSLNGSRDDVSIAGGATESLDVRFDKDGKAVLQANYPEAGVVRLK 983 >gi|307176987|gb|EFN66293.1| T-complex protein 11-like protein 1 [Camponotus floridanus] Length = 553 Score = 36.9 bits (84), Expect = 0.89, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 9/123 (7%) Query: 6 WKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEK---QDVLNRLSACTPDN 62 +K K + + + + N+ ++E + + ++ L+A +P Sbjct: 41 NQKMKNEDEQKHNADDPGTSTNCDNNVHTNEQNEVQNEEQNRQLTPNFMMGGLTAASPPK 100 Query: 63 --YTKQLIELCEKNHDYKMVEM--LQRFLHVVSFEL--GRLEVSFLKEIPEDFIENLATK 116 ++I+ + + + + + E G + + + F LA K Sbjct: 101 FVSFDEIIKTANGMKNMALAHEIAVDKNFQLQKLEPEDGSFHRRVKEIMHKAFWNLLAQK 160 Query: 117 LKN 119 L Sbjct: 161 LAE 163 >gi|307720523|ref|YP_003891663.1| DNA polymerase III, tau subunit [Sulfurimonas autotrophica DSM 16294] gi|306978616|gb|ADN08651.1| DNA polymerase III, tau subunit [Sulfurimonas autotrophica DSM 16294] Length = 563 Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 5 SWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRL-SACTPDN- 62 S++K K+ D + E P I E P I + + ++ TP N Sbjct: 351 SFEKDVKRPDIIVPQEEKKEEKPSPIKIKVQETTPEMNGKIANETPLQEKVQEEITPPNQ 410 Query: 63 ---YTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVS 100 +LI K+ +Y++ E + + VS+E L Sbjct: 411 YLVTFNELIAKI-KDRNYELGECFTKNIRFVSYENNTLTWE 450 >gi|63034435|gb|AAY28520.1| biofilm-associated protein [Staphylococcus hyicus] Length = 3278 Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 19/95 (20%) Query: 5 SWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAG-----ITEKQDVLNRLSACT 59 S + + K D S AI E A + ++ E EA + + + Sbjct: 147 SSEDPQTKKDTNETSETAIDEGASTKEQNNKEDSNTQEASTNTSSQSSEDPQTKKEQPDK 206 Query: 60 PDNYTKQ--------------LIELCEKNHDYKMV 80 N K+ + E+ +KN + ++ Sbjct: 207 SSNSIKEPDKQQEEVAKEEKAITEIADKNKELELK 241 >gi|222100874|ref|YP_002535442.1| DNA polymerase III, gamma and tau subunit [Thermotoga neapolitana DSM 4359] gi|221573264|gb|ACM24076.1| DNA polymerase III, gamma and tau subunit [Thermotoga neapolitana DSM 4359] Length = 473 Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 12/140 (8%) Query: 18 VSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDY 77 +S+ GE L + +S+ A + ++ + + K+L+E ++ D Sbjct: 336 ISTRFSGEKVLEKTKASNADNDQNNAQESTTKEE--KDKDIEFEERFKELMEELKEKGDL 393 Query: 78 KMVEMLQRFLHVVSFELGRLEVSFLKEIP------EDFIENLATKLKNWTGEDWEIRFSL 131 + L L VSFE G++ V+F + + L G+ E+ L Sbjct: 394 SIFVAL--SLSEVSFEDGKVVVTFDSSKAMHYELMKKKLPELENLFSKKLGKRVEVELRL 451 Query: 132 GRCCEYFEIDSDIKAVRTIF 151 E E + + +F Sbjct: 452 MGKEETVEK--VSQKILKLF 469 >gi|260814378|ref|XP_002601892.1| hypothetical protein BRAFLDRAFT_86370 [Branchiostoma floridae] gi|229287195|gb|EEN57904.1| hypothetical protein BRAFLDRAFT_86370 [Branchiostoma floridae] Length = 252 Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 47 EKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHV 89 +K D + + +P N K+ ++L + + L+ +++ Sbjct: 133 DKPDTKKKPISASPHNMPKEFLKLVNLHRSGILKIHLETCIYL 175 >gi|295692239|ref|YP_003600849.1| hypothetical protein LCRIS_00377 [Lactobacillus crispatus ST1] gi|295030345|emb|CBL49824.1| putative protein without homology [Lactobacillus crispatus ST1] Length = 196 Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 5/62 (8%) Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIP-----EDFIENLATKLKNWTGEDWEIR 128 N + + +L+ ++ F G L++ IP + +L L + + Sbjct: 11 NKETTLQILLEDHNSLIRFGDGELDLIRGASIPYQDYQPELAGSLKELLLEGSNRRLLVG 70 Query: 129 FS 130 S Sbjct: 71 LS 72 >gi|256849089|ref|ZP_05554522.1| glycosyl transferase [Lactobacillus crispatus MV-1A-US] gi|256713865|gb|EEU28853.1| glycosyl transferase [Lactobacillus crispatus MV-1A-US] Length = 190 Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 5/62 (8%) Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIP-----EDFIENLATKLKNWTGEDWEIR 128 N + + +L+ ++ F G L++ IP + +L L + + Sbjct: 5 NKETTLQILLEDHNSLIRFGDGELDLIRGASIPYQDYQPELAGSLKELLLEGSNRRLLVG 64 Query: 129 FS 130 S Sbjct: 65 LS 66 >gi|227877636|ref|ZP_03995689.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01] gi|256844522|ref|ZP_05550008.1| glycosyltransferase [Lactobacillus crispatus 125-2-CHN] gi|262047571|ref|ZP_06020526.1| glycosyltransferase [Lactobacillus crispatus MV-3A-US] gi|293379951|ref|ZP_06626052.1| glycosyltransferase, SP_1767 family [Lactobacillus crispatus 214-1] gi|227862784|gb|EEJ70250.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01] gi|256613600|gb|EEU18803.1| glycosyltransferase [Lactobacillus crispatus 125-2-CHN] gi|260572147|gb|EEX28712.1| glycosyltransferase [Lactobacillus crispatus MV-3A-US] gi|290923464|gb|EFE00366.1| glycosyltransferase, SP_1767 family [Lactobacillus crispatus 214-1] Length = 196 Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 5/62 (8%) Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIP-----EDFIENLATKLKNWTGEDWEIR 128 N + + +L+ ++ F G L++ IP + +L L + + Sbjct: 11 NKETTLQILLEDHNSLIRFGDGELDLIRGASIPYQDYQPELAGSLKELLLEGSNRRLLVG 70 Query: 129 FS 130 S Sbjct: 71 LS 72 >gi|195332869|ref|XP_002033115.1| GM20591 [Drosophila sechellia] gi|194125085|gb|EDW47128.1| GM20591 [Drosophila sechellia] Length = 869 Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 5/100 (5%) Query: 27 ALPRNISSDECFPLAEAGITEKQ--DVLNRLSACTPDNYTKQLIELCEKN---HDYKMVE 81 A NI A I +Q D + L++ E + K+ Sbjct: 3 ANETNIFQPLYKQDEHANILRQQIIDWAREQRKRLEQVNLEHLLKRLEDKLKQREEKLKW 62 Query: 82 MLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWT 121 + + ++ SFE ++++ + K++ T Sbjct: 63 SVIKQVNAKSFEDKHMKLTPNYWKALKLTKQALDKIEQKT 102 >gi|225438525|ref|XP_002275767.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 345 Score = 35.3 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Query: 33 SSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQL-IELCEKNHDYKMVEMLQRFLHVVS 91 S+ E A+ +E D+ ++ P N + L + L K K E ++ ++ Sbjct: 105 SNVEQKRDAQDSESEHDDMYAKILEKDPRN-VEALKVVLYGKMRRGKTKEAVEYVERLID 163 Query: 92 FELGRLEVSFLKEIPEDFIENLATK 116 E +E L+ + + + +L+ Sbjct: 164 IEPDEVEWRLLQALSYEIMGHLSKA 188 >gi|195581932|ref|XP_002080783.1| GD10064 [Drosophila simulans] gi|194192792|gb|EDX06368.1| GD10064 [Drosophila simulans] Length = 869 Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 27 ALPRNISSDECFPLAEAGITEKQ--DVLNRLSACTPDNYTKQLIELCE---KNHDYKMVE 81 A NI A I +Q D + L++ E K+ + K+ Sbjct: 3 ANETNIFQPLYKQDEHANILRQQIIDWAREQRKRLEQVNLEHLLKRLEDKLKHREEKLKW 62 Query: 82 MLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWT 121 + + ++ SFE ++++ + K++ T Sbjct: 63 SVFKQVNAKSFEDKHMKLTPNYWKALKLTKQALDKIEQKT 102 >gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens] gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens] Length = 7662 Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 30/153 (19%) Query: 11 KKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIEL 70 K + +SS + A P N++ E ++ L Q++ Sbjct: 6509 KGNGVVGLSSISAVSQAAPSNLNKKETKQKLHEKHLQESAELEENLRANEIFVINQVLSE 6568 Query: 71 CEKNHD---YKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWEI 127 C K + K+ E L+ L S E + IE A K++ Sbjct: 6569 CNKKKEEAIAKIKEELRDALKSAS----------TDEERQQIIEEHAKKIEK-------- 6610 Query: 128 RFSLGRCCEYFEIDSDIKAVRTIFPTAQVVCIR 160 + E E I+ ++ IR Sbjct: 6611 -INNAHEKEKQERLKKIRK--------ELSDIR 6634 >gi|297834832|ref|XP_002885298.1| ATPREP1 [Arabidopsis lyrata subsp. lyrata] gi|297331138|gb|EFH61557.1| ATPREP1 [Arabidopsis lyrata subsp. lyrata] Length = 1081 Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 34 SDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEM 82 + E P E E+ + N L + L EL + K+ + Sbjct: 564 TIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQE 612 >gi|22331173|ref|NP_188548.2| ATPREP1 (PRESEQUENCE PROTEASE 1); metalloendopeptidase [Arabidopsis thaliana] gi|115311842|sp|Q9LJL3|PREP1_ARATH RecName: Full=Presequence protease 1, chloroplastic/mitochondrial; Short=AtPreP1; Short=PreP 1; AltName: Full=Zinc metalloprotease 1; Short=AtZnMP1; Flags: Precursor gi|19699073|gb|AAL90904.1| AT3g19170/MVI11_8 [Arabidopsis thaliana] gi|20259504|gb|AAM13872.1| putative metalloprotease [Arabidopsis thaliana] gi|26983906|gb|AAN86205.1| putative metalloprotease [Arabidopsis thaliana] gi|30102504|gb|AAP21170.1| At3g19170/MVI11_8 [Arabidopsis thaliana] Length = 1080 Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 34 SDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEM 82 + E P E E+ + N L + L EL + K+ + Sbjct: 563 TIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQE 611 >gi|331699132|ref|YP_004335371.1| Flavanone 3-dioxygenase [Pseudonocardia dioxanivorans CB1190] gi|326953821|gb|AEA27518.1| Flavanone 3-dioxygenase [Pseudonocardia dioxanivorans CB1190] Length = 334 Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%) Query: 93 ELGRLEVSFLKEIPEDFIENLATKLKNWTGEDWE 126 E E + +P F+ NL L+ WT + W Sbjct: 229 ENKAGEWVDVPVVPGTFVVNLGDSLERWTNDRWV 262 >gi|9294618|dbj|BAB02957.1| zinc metalloprotease (insulinase family) [Arabidopsis thaliana] Length = 1052 Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 34 SDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEM 82 + E P E E+ + N L + L EL + K+ + Sbjct: 535 TIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQE 583 >gi|118789389|ref|XP_317380.3| AGAP008077-PA [Anopheles gambiae str. PEST] gi|116123195|gb|EAA12273.3| AGAP008077-PA [Anopheles gambiae str. PEST] Length = 667 Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Query: 8 KRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDN--YTK 65 ++ KK L+ +S N + ++ + L + + +D N LS PD + Sbjct: 10 EKPKKKKTLSSTSLVSIPNTIKLSMLNSGLLSLDKVKL-SARDEKNPLSQTMPDKPTELR 68 Query: 66 QLIELCEKNHDYKMVEMLQ 84 +LCE+ + ++ L+ Sbjct: 69 HFAKLCEQRRKFPILYKLE 87 >gi|109157627|pdb|2FGE|A Chain A, Crystal Structure Of Presequence Protease Prep From Arabidopsis Thaliana gi|109157628|pdb|2FGE|B Chain B, Crystal Structure Of Presequence Protease Prep From Arabidopsis Thaliana Length = 995 Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 34 SDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEM 82 + E P E E+ + N L + L EL + K+ + Sbjct: 478 TIEXQPDPEKATQEEVEEKNILEKVKAAXTEEDLAELARATEELKLKQE 526 >gi|33861187|ref|NP_892748.1| glutathione S-transferase N terminus [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639919|emb|CAE19089.1| Glutathione S-transferase N terminus [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 219 Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 14/123 (11%) Query: 9 RKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLI 68 + K ++ +N S L +N E + + N P N K+++ Sbjct: 37 KNKPIEFMNKSRTKTVPILLKKNNEVIEESLDIIIWALSESEKENIKKFYNPKNKEKEIL 96 Query: 69 ELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW----TGED 124 E+ +N D+ L RF + F + +L+ +K W T Sbjct: 97 EIISEN-DHSFKYHLDRFKYSARFNASEEDYHYLEA---------TKFIKKWNKILTNNR 146 Query: 125 WEI 127 W I Sbjct: 147 WII 149 >gi|254585365|ref|XP_002498250.1| ZYRO0G05830p [Zygosaccharomyces rouxii] gi|238941144|emb|CAR29317.1| ZYRO0G05830p [Zygosaccharomyces rouxii] Length = 1578 Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 34 SDECFPLA--EAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRF 86 + C P E EK++ +S N+ + L L + + ++ + L+ Sbjct: 1195 KNSCKPEEFCEMTEDEKREKGKYVSELEEINHYESL--LANEKKEIELRKQLEFN 1247 >gi|57168279|ref|ZP_00367418.1| probable nucleotidyltransferase Cj1367c [Campylobacter coli RM2228] gi|57020653|gb|EAL57322.1| probable nucleotidyltransferase Cj1367c [Campylobacter coli RM2228] Length = 782 Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 7/75 (9%), Positives = 26/75 (34%), Gaps = 4/75 (5%) Query: 40 LAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHV----VSFELG 95 L + I + + + + N + ++E+ + ++ V+F+ Sbjct: 576 LEQNAILQDKITHIKSNLFIIKNTFEDIVEIARFAKENDFKFWFSNSTNLSLQIVAFKDF 635 Query: 96 RLEVSFLKEIPEDFI 110 ++E+ + + Sbjct: 636 KIEIVLTALANLNLV 650 >gi|75812843|ref|YP_320460.1| hypothetical protein Ava_C0185 [Anabaena variabilis ATCC 29413] gi|75705599|gb|ABA25271.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 2581 Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 54/164 (32%), Gaps = 20/164 (12%) Query: 4 ISWKKRKKKLDAL---NVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTP 60 I K +K N ++ G + + +N + +A + +L P Sbjct: 1588 IPAKALPEKNTTNIQSNTNATVGGISQVYQNAVEIQVLTDIQAEAKNQPILLPNSRQADP 1647 Query: 61 DNYTKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + L ++ EK + ++ L+ + E + + + +A W Sbjct: 1648 TKAIEILGKISEKKVE-QLRSHLETHFKPI-LENDKSNYAP--------LRQVA-----W 1692 Query: 121 TGEDWEIRFSLGRCCEYFEIDSDIKAVRTIFPTAQVVCIRTIPN 164 G W + D ++ V+ ++P A +V + N Sbjct: 1693 VGAKW--DLKDKDFKPGVQDDKLMELVKQVYPDADIVLVTYSEN 1734 >gi|300869727|ref|YP_003784598.1| glutamine synthetase [Brachyspira pilosicoli 95/1000] gi|300687426|gb|ADK30097.1| glutamine synthetase [Brachyspira pilosicoli 95/1000] Length = 698 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 32 ISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFL--HV 89 IS +E + D++N+ +YT++L+ + EK K+ +++ L + Sbjct: 565 ISLEEYNKVINIEALTLIDMINKYIIPFSLDYTEELVNIYEKKKSLKIKYDIEKDLLDRL 624 Query: 90 VSFELG 95 S Sbjct: 625 TSLTNN 630 >gi|305431579|ref|ZP_07400753.1| GlnD family protein [Campylobacter coli JV20] gi|304445386|gb|EFM38025.1| GlnD family protein [Campylobacter coli JV20] Length = 782 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 7/75 (9%), Positives = 26/75 (34%), Gaps = 4/75 (5%) Query: 40 LAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHV----VSFELG 95 L + I + + + + N + ++E+ + ++ V+F+ Sbjct: 576 LEQNAILQDKITHIKSNLFIIKNTFEDIVEIARFAKENDFKFWFSNSTNLSLQIVAFKDF 635 Query: 96 RLEVSFLKEIPEDFI 110 ++E+ + + Sbjct: 636 KIEIVLTALANLNLV 650 >gi|254410301|ref|ZP_05024081.1| caspase domain protein [Microcoleus chthonoplastes PCC 7420] gi|196183337|gb|EDX78321.1| caspase domain protein [Microcoleus chthonoplastes PCC 7420] Length = 2099 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 1 LHAISWKKRK--KKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSAC 58 + AIS K K KL+ V + + N +NI + E Q V + Sbjct: 414 ISAISKKLDKFYDKLNQNLVKNLELDRNNNDKNIKKEREDSFKELVNELIQQVSTEQNLL 473 Query: 59 TPDNYTKQLIELCE-KNHDYKMV 80 + ++L+ LC+ +Y + Sbjct: 474 LVIDQFEELVTLCQPLEREYFLK 496 >gi|296082522|emb|CBI21527.3| unnamed protein product [Vitis vinifera] Length = 252 Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 33/84 (39%) Query: 33 SSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHDYKMVEMLQRFLHVVSF 92 S+ E A+ +E D+ ++ P N + L K K E ++ ++ Sbjct: 12 SNVEQKRDAQDSESEHDDMYAKILEKDPRNVEALKVVLYGKMRRGKTKEAVEYVERLIDI 71 Query: 93 ELGRLEVSFLKEIPEDFIENLATK 116 E +E L+ + + + +L+ Sbjct: 72 EPDEVEWRLLQALSYEIMGHLSKA 95 >gi|145546167|ref|XP_001458767.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426588|emb|CAK91370.1| unnamed protein product [Paramecium tetraurelia] Length = 456 Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 10/93 (10%) Query: 3 AISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDN 62 ++ K + S I +N + ++ I+++ + + N Sbjct: 74 EVTENNDKHGSSTSSNQSIKIAKNQIISPTQNETPEQHPNEQISQQSEDEPVSFDKSKTN 133 Query: 63 YTKQLI--ELCEKN--------HDYKMVEMLQR 85 +QL+ +L + D K L+R Sbjct: 134 SFEQLLKDDLLNQKLRTGLQFLRDGKFKLALER 166 >gi|293375830|ref|ZP_06622099.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] gi|292645538|gb|EFF63579.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] Length = 1080 Score = 34.6 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 21/81 (25%), Gaps = 7/81 (8%) Query: 58 CTPDNYTKQLIELCEKNHDYKM-----VEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 DN Q + K + + SF+ E +++ E Sbjct: 551 NLKDNEFGQAEVMIPKYRALYLDQLIQHHETLHAVRDASFKSMVREFKLVEDADFIVPEP 610 Query: 113 LATKL--KNWTGEDWEIRFSL 131 L L TG W + Sbjct: 611 LQKTLRRYQKTGFRWIKTLAK 631 >gi|325841031|ref|ZP_08167240.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] gi|325490097|gb|EGC92440.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] Length = 1080 Score = 34.6 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 21/81 (25%), Gaps = 7/81 (8%) Query: 58 CTPDNYTKQLIELCEKNHDYKM-----VEMLQRFLHVVSFELGRLEVSFLKEIPEDFIEN 112 DN Q + K + + SF+ E +++ E Sbjct: 551 NLKDNEFGQAEVMIPKYRALYLDQLIQHHETLHAVRDASFKSMVREFKLVEDADFIVPEP 610 Query: 113 LATKL--KNWTGEDWEIRFSL 131 L L TG W + Sbjct: 611 LQKTLRRYQKTGFRWIKTLAK 631 >gi|242092882|ref|XP_002436931.1| hypothetical protein SORBIDRAFT_10g011270 [Sorghum bicolor] gi|241915154|gb|EER88298.1| hypothetical protein SORBIDRAFT_10g011270 [Sorghum bicolor] Length = 854 Score = 34.2 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 35/105 (33%), Gaps = 1/105 (0%) Query: 4 ISWKKRKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNY 63 + KK++ K + + + +E + E++ A N Sbjct: 661 MENKKKQTKQEQNKADESIKNDEMKVEEPTENEQNNAESSKAMEEEKQKEMQIAKDFSNS 720 Query: 64 TKQLIELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPED 108 + +IE +K K + + +V++ E L + + + Sbjct: 721 AQAVIEEIDKKK-MKQLTEVVDNRNVITNEEELLMIRAREYEDDK 764 >gi|259016151|sp|A8X0L9|TBP7_CAEBR RecName: Full=Tat-binding homolog 7; AltName: Full=Lin-48 expression abnormal protein 1 gi|309363425|emb|CAP26179.2| CBR-LEX-1 protein [Caenorhabditis briggsae AF16] Length = 1285 Score = 34.2 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 5/107 (4%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 D + A+ EN + ++ E I + + LI+LC + Sbjct: 1158 DDTEETEEAVAENNVDADVEMKETPADPVPTIQSSSSQEREI--IVSADSITDLIKLCVE 1215 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + V L+ + S +E + E+ E LA ++ W Sbjct: 1216 KSEGWSVSELE---RLSSVLSHTIERFRDEWNRENLPEQLAQIVREW 1259 >gi|268536638|ref|XP_002633454.1| C. briggsae CBR-LEX-1 protein [Caenorhabditis briggsae] Length = 1221 Score = 34.2 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 5/107 (4%) Query: 14 DALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK 73 D + A+ EN + ++ E I + + LI+LC + Sbjct: 1094 DDTEETEEAVAENNVDADVEMKETPADPVPTIQSSSSQEREI--IVSADSITDLIKLCVE 1151 Query: 74 NHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKNW 120 + V L+ + S +E + E+ E LA ++ W Sbjct: 1152 KSEGWSVSELE---RLSSVLSHTIERFRDEWNRENLPEQLAQIVREW 1195 >gi|320582927|gb|EFW97144.1| hypothetical protein HPODL_1854 [Pichia angusta DL-1] Length = 1180 Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 28/102 (27%), Gaps = 9/102 (8%) Query: 23 IGENALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEK--NHDYKMV 80 E+ P I S + E E + + D K L+ K + Sbjct: 883 PAESGQPETIGSLLTK-VKEIPKAEPEQRPAAVKKKKHDASFKDLLSSINKIQKKESYHH 941 Query: 81 EML--QRFLHVV-SFELGRLEVSFLKEIPEDFIENLATKLKN 119 L + S+ + + + P L + L+ Sbjct: 942 HELPRMTNFTPMPSYRPFIMSI---DQAPSKAPAELESFLQE 980 >gi|229543804|ref|ZP_04432863.1| chaperone protein DnaK [Bacillus coagulans 36D1] gi|229324943|gb|EEN90619.1| chaperone protein DnaK [Bacillus coagulans 36D1] Length = 608 Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 47/120 (39%), Gaps = 21/120 (17%) Query: 9 RKKKLDALNVSSFAIGENALPRNISSDECFPLAEAGITEKQDVLNRLSAC--TPDNYTKQ 66 +++K+ + ++ + E + R + E + E+ ++ N T + K+ Sbjct: 465 KQQKITIKSSTTLSDEE--IERMVKEAEANAEKDKKRKEEAELRNEADQLVFTAEKTLKE 522 Query: 67 L--------IELCEKNHDYKMVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLK 118 L I EK D ++ +++ E+ K+ ++ +++L+ KL Sbjct: 523 LEGKVDASEISKAEKAKD-ELKAAIEKN--------DLNEIRQKKDALQEIVQDLSVKLY 573 >gi|206889465|ref|YP_002248721.1| response regulator receiver domain protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741403|gb|ACI20460.1| response regulator receiver domain protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 165 Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 7/101 (6%) Query: 26 NALPRNISSDECFPLAEAGITEKQDVLNRLSACTPDNYTKQLIELCEKNHD-------YK 78 N+L +N S + FP + + +L D L++ C+K + Sbjct: 18 NSLNKNKFSVKFFPNIDETLQNIDRYEPKLILLVADQEETDLLDFCKKIREKYSLLLPIL 77 Query: 79 MVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIENLATKLKN 119 +V F+++ F+ ++ E+F + + L Sbjct: 78 LVVDFYSFVNLNQFKNLGVDFIIKPFTQEEFNAKIESFLSE 118 >gi|255527427|ref|ZP_05394300.1| NLP/P60 protein [Clostridium carboxidivorans P7] gi|296187456|ref|ZP_06855851.1| NlpC/P60 family protein [Clostridium carboxidivorans P7] gi|255508873|gb|EET85240.1| NLP/P60 protein [Clostridium carboxidivorans P7] gi|296047978|gb|EFG87417.1| NlpC/P60 family protein [Clostridium carboxidivorans P7] Length = 346 Score = 33.4 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 8/98 (8%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 4 ISWKKRKKKLDALNVSSFAIGEN---ALPRNISSDECFPLAEAGITEKQDVLNRLSACTP 60 I+ +K +++ + + + ++++ AE+ + ++D+ N+ Sbjct: 43 INIEKLDNEIETVMKQTDDNNKQIVATEASIKTTEKELQDAESNLNNQKDIFNKRVKSMY 102 Query: 61 DNYTKQLIELCEKNHDY-KMVEMLQRFLHVVSFELGRL 97 N + + ++ D ++ + +++ + Sbjct: 103 INGFDSYLNVLLQSKDIGDLLSNTDTLVRLINLNENTI 140 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.308 0.144 0.394 Lambda K H 0.267 0.0435 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,344,382,679 Number of Sequences: 13984884 Number of extensions: 53920711 Number of successful extensions: 359553 Number of sequences better than 10.0: 2141 Number of HSP's better than 10.0 without gapping: 998 Number of HSP's successfully gapped in prelim test: 1143 Number of HSP's that attempted gapping in prelim test: 320421 Number of HSP's gapped (non-prelim): 29317 length of query: 165 length of database: 4,792,584,752 effective HSP length: 126 effective length of query: 39 effective length of database: 3,030,489,368 effective search space: 118189085352 effective search space used: 118189085352 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 76 (33.8 bits)