HHsearch alignment for GI: peg_476 and conserved domain: COG0728
>COG0728 MviN Uncharacterized membrane protein, putative virulence factor [General function prediction only].
Probab=100.00 E-value=0 Score=356.17 Aligned_cols=230 Identities=29% Similarity=0.548 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 89999999999999999999999999999999576567999999996349999999865566777558999999851007
Q 537021.9.peg.4 2 LMKLVRNFFTLVASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGS 81 (241)
Q Consensus 2 ~m~l~r~~~~i~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~ 81 (241)
T Consensus 6 ~~sllks~~~vs~~Tl~SRi~G~vRd~~iA~~fGa~~~aDAF~vAf~iPN~lRrlfa--egafs~aFVPv~~~~~~~~~~ 83 (518)
T COG0728 6 KMSLLKSLIIVSSATLLSRILGFVRDVLIAAAFGAGAAADAFFVAFKLPNLLRRLFA--EGAFSSAFVPVLAEAKKKEGE 83 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHCCHH
T ss_conf 788999999999999999999999999999996776688999999972899999984--636766666789999870605
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999871433210247632102468889999999999999899999999999999986
Q 537021.9.peg.4 82 ENAWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGR 161 (241)
Q Consensus 82 ~~a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~ 161 (241)
T Consensus 84 ~~~~~f~~~v~~~l~~~ll~vt~L~~l~~p~iv~~~~~~g~-~~~~~-~~a~~l~~i~~Pyl~~isL~al~~aiLNs~~~ 161 (518)
T COG0728 84 EAARFFSRLVTGLLTLVLLLVTLLGILFAPWLVRLLLAPGF-DETDK-FLAVLLTRILFPYLLFISLSALFGAILNSRNR 161 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 57999999999999999999999999988999999717897-51568-99999999999999999999999999840372
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC
Q ss_conf 8998677788999999999999960465573168999999999999999999999999739877776889998998542
Q 537021.9.peg.4 162 YFIACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAKKSGVELRFQYPRLTCNVKLFL 240 (241)
Q Consensus 162 F~~~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~g~~~~~~~~~~~~~~k~~l 240 (241)
T Consensus 162 F~~~a~aPvl~Nv~~I~~~l~~~---~~~-~~-~~~~La~gvl~Gg~~Q~l~~lp~l~~~g~~~~p~~~~~~~~lk~~~ 235 (518)
T COG0728 162 FFIPAFAPVLLNVSVIGLALFLG---PYF-DP-PLLALAWGVLIGGLLQLLVQLPALRKAGLLIKPRFGFKDPGLKRFL 235 (518)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHC---CCH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 12044649999999999999854---100-04-7899999999999999999999999836544787888715599999