HHsearch alignment for GI: peg_476 and conserved domain: COG0728
>COG0728 MviN Uncharacterized membrane protein, putative virulence factor [General function prediction only].
Probab=99.59 E-value=9.7e-12 Score=82.40 Aligned_cols=223 Identities=12% Similarity=0.155 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999999999999999999957656799999999634999999986556677755899999985100799
Q 537021.9.peg.4 4 KLVRNFFTLVASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGSEN 83 (241)
Q Consensus 4 ~l~r~~~~i~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~~~ 83 (241)
T Consensus 233 ~~~~~~~p~~l~~sisQi-~lli~~~iAS~l~~Gsis-~l~YA~rl~qlPlGifgv---ai~tvllP~lSr~~~~~~~~~ 307 (518)
T COG0728 233 RFLKLMLPALLGVSISQI-NLLIDTAIASFLAEGSVS-WLYYADRLYQLPLGIFGV---ALSTVLLPSLSRHAANGDWPE 307 (518)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCHHH
T ss_conf 999999999999999999-999999999860135099-999999999715899999---999998799999750676598
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999987143321024763210246888999999999999989999999999999998689
Q 537021.9.peg.4 84 AWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGRYF 163 (241)
Q Consensus 84 a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~F~ 163 (241)
T Consensus 308 ~~~~l~~~i~l~lll~lP~~~~l~~la~piv~~Lf~rG-~F~~~d~~~ta~~L~~y~~gL~~~~L~~ll~~~FYAr~d~k 386 (518)
T COG0728 308 FLKLLDWGLRLTLLLTLPASAGLLVLAEPIVSLLFERG-AFTAEDVLMTAEALAAYSLGLIPFALVKLLSRVFYAREDTK 386 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999998999999995358-99857799999999999874489999999999999803877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHC
Q ss_conf 986777889999999999999604655731689999999999999999999999997398-77776889998998542
Q 537021.9.peg.4 164 IACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAKKSGV-ELRFQYPRLTCNVKLFL 240 (241)
Q Consensus 164 ~~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~g~-~~~~~~~~~~~~~k~~l 240 (241)
T Consensus 387 tP~~i~ii~~~~n~~l~~~l~~~~~~-------~giala~s~a~~~~~~ll~~~l~k~~~~~~~~~~~~~~-~~k~~l 456 (518)
T COG0728 387 TPMKIAIISLVVNILLNLLLIPPLGH-------VGLALATSLAAWVNALLLYYLLRKRLVYLPGRGWGLFL-ILKLLL 456 (518)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH-HHHHHH
T ss_conf 37699999999999999997861352-------29999999999999999999999843778620035999-999999