HHsearch alignment for GI: peg_476 and conserved domain: PRK00187
>PRK00187 multidrug efflux protein NorA; Provisional.
Probab=99.35 E-value=1.8e-08 Score=64.41 Aligned_cols=194 Identities=12% Similarity=0.013 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 99999999999999999999957656799999999634999999986556677755899999985100799999999999
Q 537021.9.peg.4 13 VASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGSENAWRLSSEVF 92 (241)
Q Consensus 13 ~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~~~a~~~~~~~~ 92 (241)
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~lG~~al-AA~~i~~~i~~l~~~~~~----gi~~A~~~~vG~~lGa~~~~~a~~~~~~~~ 319 (462)
T PRK00187 245 IGGTYAVEVGLFTFAALCMGALGSTQL-AAHQIALQAVSVAFMVPV----GLSYAVTMRVGQHYGAGRLLEARRAGRVGI 319 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 999999999999999999985680999-999999999999999999----999999999999876899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998714332102476-321024688899999999999998999999999999999868998677788
Q 537021.9.peg.4 93 SVLLPILMVMIMVIELVLPLLVRYVMAP-GFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGRYFIACMPSMV 171 (241)
Q Consensus 93 ~~~~~~~~~i~~l~~ifap~~v~~l~ap-Gf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~F~~~a~~pi~ 171 (241)
T Consensus 320 ~~~~~~~~~~~~~~~~f~~~i~~-lFt~~~d~~~~evi~l~~~~l~i~~~~~~~~~~~~v~~g~lrg~G~~~~~~~~~~i 398 (462)
T PRK00187 320 GFGAVAMLLFAGLFWLLPEAIIG-LFLDRNDPAFAEIVQLAVSLLAVAAWFELFDGTQTIAMGAIRGLKDARTTFLIGLA 398 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99999999999999999999999-86288985239999999999999999999999999999999982743999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999960465573168999999999999999999999
Q 537021.9.peg.4 172 IHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYL 216 (241)
Q Consensus 172 ~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~ 216 (241)
T Consensus 399 ~~w~v--~vPla~~l~~~--~~~G~~GiW~g~~i~~~~~~i~~~~ 439 (462)
T PRK00187 399 CYWLV--GAPLAWLLAFT--LGWGAVGVWWGLALGLACAAVALTL 439 (462)
T ss_pred HHHHH--HHHHHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999--99999999998--5799233689899999999999999