HHsearch alignment for GI: peg_476 and conserved domain: PRK09575
>PRK09575 vmrA multidrug efflux pump VmrA; Reviewed.
Probab=99.60 E-value=5.2e-12 Score=83.88 Aligned_cols=221 Identities=10% Similarity=-0.020 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999999999999995----7656799999999634999999986556677755899999985100
Q 537021.9.peg.4 5 LVRNFFTLVASESVNRCLGFVRASLMAAVF----GVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNG 80 (241)
Q Consensus 5 l~r~~~~i~~~tl~SrilGf~Re~~~A~~f----Ga~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~ 80 (241)
T Consensus 13 I~k~~~~laiP~i~~~l~~~ly~ivD~~fvG~~~G~~-alAAv~~~~pi~~~~~~~~~----~lg~G~~~lis~~~G~~~ 87 (456)
T PRK09575 13 IYRTFWRYTIPSIAAMLVNGLYQIVDGIFIGHYVGAE-GLAGINMAWPVIGIILGIGL----MVGMGTGSLLSIYRGEGD 87 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCC
T ss_conf 8999999999999999999999999999944726898-99999999999999999999----999999999999976999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999999999999987143321024763210246888999999999999989999999999999998
Q 537021.9.peg.4 81 SENAWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASG 160 (241)
Q Consensus 81 ~~~a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~ 160 (241)
T Consensus 88 ~~~a~~~~~~~~~~~~~~~~i~~~~~~~~~~~il~-~l----ga~~~v~~~a~~Yl~i~~~g~~~~~~~~~~~~~lra~G 162 (456)
T PRK09575 88 LQKAKTILTTGLLLLLLLGPIVSIILWLFADDFLL-AQ----GAEGRTLELGLQYIQVLTWGCLFTIGAIALPMLVRNDE 162 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999999998-83----97899999999999999998899999999999998289
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCC-HHHH
Q ss_conf 6899867778899999999999996046557316899999999999999999999999973--987777688999-8998
Q 537021.9.peg.4 161 RYFIACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAKKS--GVELRFQYPRLT-CNVK 237 (241)
Q Consensus 161 ~F~~~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~--g~~~~~~~~~~~-~~~k 237 (241)
T Consensus 163 ~~~~~~~~~i~~~i~NiiLd~lfI~-~----~~lGv~GAAlATvisq~i~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (456)
T PRK09575 163 SPNLATGLMVLGALINIVLDYLFIG-V----LDWGLTGAAIATALAQLVVTILGLGYFFSSRANIKLSLKELLFNWSLAP 237 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHC-C----CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHH
T ss_conf 9830589999977889989999972-0----8998644999999999999999999999068614753763115699999
Q ss_pred HHC
Q ss_conf 542
Q 537021.9.peg.4 238 LFL 240 (241)
Q Consensus 238 ~~l 240 (241)
T Consensus 238 ~i~ 240 (456)
T PRK09575 238 QIV 240 (456)
T ss_pred HHH
T ss_conf 999