HHsearch alignment for GI: peg_476 and conserved domain: pfam03023
>pfam03023 MVIN MviN-like protein. Deletion of the mviN virulence gene in Salmonella enterica serovar. Typhimurium greatly reduces virulence in a mouse model of typhoid-like disease. Open reading frames encoding homologues of MviN have since been identified in a variety of bacteria, including pathogens and non-pathogens and plant-symbionts. In the nitrogen-fixing symbiont Rhizobium tropici, mviN is required for motility. The MviM protein is predicted to be membrane-associated.
Probab=100.00 E-value=0 Score=308.37 Aligned_cols=201 Identities=27% Similarity=0.510 Sum_probs=187.3
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99995765679999999963499999998655667775589999998510079999999999999999999999999987
Q 537021.9.peg.4 30 MAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGSENAWRLSSEVFSVLLPILMVMIMVIELV 109 (241)
Q Consensus 30 ~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~i~~l~~if 109 (241)
T Consensus 1 iA~~fGa~~~~DAf~~A~~iPn~l~~l~~--~Gals~afIP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~f 77 (452)
T pfam03023 1 IAAYFGAGPLADAFNVAFRIPNLLRRLFA--EGAFSSAFVPVFAELKQ-ADKDEAAEFVRRVSTLLIGVLLLVTLLGILA 77 (452)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 94997878486999999998999999999--99999999999999985-3969999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 14332102476321024688899999999999998999999999999999868998677788999999999999960465
Q 537021.9.peg.4 110 LPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGRYFIACMPSMVIHILPIFVLTYALCYGSN 189 (241)
Q Consensus 110 ap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~F~~~a~~pi~~Ni~~I~~~~~~~~~~~~ 189 (241)
T Consensus 78 ap~lv~-l~a~Gf--~~~~~~la~~l~ri~~p~i~f~~l~a~~~~~Lna~~~F~~~a~~pi~~N~~~I~~ll~~~~~~g- 153 (452)
T pfam03023 78 APWVIR-LLAPGF--DAETFSLTVSLLRITFPYLLLVSLSAVFGAVLNARKKFFAPAFSPVLLNIGVILTLLFLANYFG- 153 (452)
T ss_pred HHHHHH-HHCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf 999999-985887--5468999999999999999999999999999988388555787589899999999999998556-
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC
Q ss_conf 573168999999999999999999999999739877776889998998542
Q 537021.9.peg.4 190 MHKAEMIYLLCWGVFLAHAVYFWILYLSAKKSGVELRFQYPRLTCNVKLFL 240 (241)
Q Consensus 190 ~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~g~~~~~~~~~~~~~~k~~l 240 (241)
T Consensus 154 ---~~~i~~la~g~~~G~~~q~l~~~~~l~k~g~~~~~~~~~~~~~lk~~~ 201 (452)
T pfam03023 154 ---REPIYGLAIGVLIGGVLQLLVQLPFLRKAGLLLKPRFNFRDKGVKRFL 201 (452)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf ---189999999999999999999999999829964554354543688999