HHsearch results for GI: peg_476 and protein with PDBid: 3mkt_A

>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.19  E-value=1.3e-09  Score=69.49  Aligned_cols=202  Identities=10%  Similarity=0.015  Sum_probs=143.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             99999999999999999999999999999576567999999996349999999865566777558999999851007999
Q 537021.9.peg.4    5 LVRNFFTLVASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGSENA   84 (241)
Q Consensus         5 l~r~~~~i~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~~~a   84 (241)
                      +.|-+.-+.+..+..-+.|++-...+++ +|+.. ..|...+..+-++...+.    ..+..+.-...+|...++|+|++
T Consensus        14 l~~la~P~~~~~l~~~~~~~vD~~~vg~-lg~~~-laav~~~~~i~~~~~~~~----~gl~~g~~~lvaq~~G~~~~~~~   87 (460)
T 3mkt_A           14 LIKLATPVLIASVAQTGMGFVDTIMAGG-VSAID-MAAVSIAASIWLPSILFG----VGLLMALVPVVAQLNGAGRQHKI   87 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTHHH-HTTTT-SSHHHHHHHHHHHHHHHH----HHHHHHHGGGCTTTTSSSSTTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHH-HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             9999999999999999999999999875-28899-999999999999999999----99999999999999739998999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999871433210247632102468889999999999999899999999999999986899
Q 537021.9.peg.4   85 WRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGRYFI  164 (241)
Q Consensus        85 ~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~F~~  164 (241)
                      .+..+..+.....+..++ .+...+.|++.. ++    ..++|..+.+..+.++.+|..++..+.....+++++.++...
T Consensus        88 ~~~~~~~l~~~~~~~i~~-~~~~~~~~~i~~-~~----~~~~~~~~~a~~Y~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  161 (460)
T 3mkt_A           88 PFEVHQGLILALLVSVPI-IAVLFQTQFIIR-FM----DVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKP  161 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHHHHHHTTCS-SC----SSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTT
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf             999999999999999988-899866999999-96----253999999876403010013126788998765204545531


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8677788999999999999960465573168999999999999999999999999
Q 537021.9.peg.4  165 ACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAK  219 (241)
Q Consensus       165 ~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~  219 (241)
                      |....+..+++.++.-.... ++.......++.+.+++.................
T Consensus       162 ~~~~~i~~~i~ni~l~~~li-~g~~~~~~~~~~G~a~a~~~~~~~~~~~~~~~~~  215 (460)
T 3mkt_A          162 AMVIGFIGLLLNIPLNWIFV-YGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIV  215 (460)
T ss_dssp             THHHHHHHHHHHHHHHHHHH-SCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCEEECCCCEE-ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             57643211332122144101-1465566510789999988889998544677755