HHsearch results for GI: peg_476 and protein with PDBid: 3mkt_A
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.19 E-value=1.3e-09 Score=69.49 Aligned_cols=202 Identities=10% Similarity=0.015 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99999999999999999999999999999576567999999996349999999865566777558999999851007999
Q 537021.9.peg.4 5 LVRNFFTLVASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGSENA 84 (241)
Q Consensus 5 l~r~~~~i~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~~~a 84 (241)
+.|-+.-+.+..+..-+.|++-...+++ +|+.. ..|...+..+-++...+. ..+..+.-...+|...++|+|++
T Consensus 14 l~~la~P~~~~~l~~~~~~~vD~~~vg~-lg~~~-laav~~~~~i~~~~~~~~----~gl~~g~~~lvaq~~G~~~~~~~ 87 (460)
T 3mkt_A 14 LIKLATPVLIASVAQTGMGFVDTIMAGG-VSAID-MAAVSIAASIWLPSILFG----VGLLMALVPVVAQLNGAGRQHKI 87 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHH-HTTTT-SSHHHHHHHHHHHHHHHH----HHHHHHHGGGCTTTTSSSSTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHH-HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 9999999999999999999999999875-28899-999999999999999999----99999999999999739998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999871433210247632102468889999999999999899999999999999986899
Q 537021.9.peg.4 85 WRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGRYFI 164 (241)
Q Consensus 85 ~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~F~~ 164 (241)
.+..+..+.....+..++ .+...+.|++.. ++ ..++|..+.+..+.++.+|..++..+.....+++++.++...
T Consensus 88 ~~~~~~~l~~~~~~~i~~-~~~~~~~~~i~~-~~----~~~~~~~~~a~~Y~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 161 (460)
T 3mkt_A 88 PFEVHQGLILALLVSVPI-IAVLFQTQFIIR-FM----DVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKP 161 (460)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHTTCS-SC----SSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTT
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 999999999999999988-899866999999-96----253999999876403010013126788998765204545531
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8677788999999999999960465573168999999999999999999999999
Q 537021.9.peg.4 165 ACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAK 219 (241)
Q Consensus 165 ~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~ 219 (241)
|....+..+++.++.-.... ++.......++.+.+++.................
T Consensus 162 ~~~~~i~~~i~ni~l~~~li-~g~~~~~~~~~~G~a~a~~~~~~~~~~~~~~~~~ 215 (460)
T 3mkt_A 162 AMVIGFIGLLLNIPLNWIFV-YGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIV 215 (460)
T ss_dssp THHHHHHHHHHHHHHHHHHH-SCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEECCCCEE-ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57643211332122144101-1465566510789999988889998544677755