HHsearch alignment for GI: peg_477 and conserved domain: COG0534
>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
Probab=99.37 E-value=1.5e-10 Score=70.39 Aligned_cols=145 Identities=19% Similarity=0.116 Sum_probs=126.7
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02677998899629789999999999999999999999999998899999997078988899877777899999999999
Q 537021.9.peg.4 2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGF 81 (235)
Q Consensus 2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~ 81 (235)
T Consensus 298 ~a~~~lvG~~~Ga~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~lf~~----~~~v~~~~~~~l~i~~~~~~~~ 373 (455)
T COG0534 298 QAVTILVGQNLGAGNYKRARRAARLALKLSLLIALLIALLLLLFREPIISLFTT----DPEVIALAVILLLIAALFQPFD 373 (455)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999877999999999999999999999999999999989999999789----4999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 65534457787766543345788999988-86432455310-12102313102799999999999999711
Q 537021.9.peg.4 82 LLSRVLLSEFYARNDVKTPAKFYILSIVM-GFVIAIGLFPF-IGGYGIATAEVSWVWVNTICLAVALLKRR 150 (235)
Q Consensus 82 ~l~~il~~~~ya~~~~~~p~~~~~i~~ii-ni~l~~~li~~-~g~~G~a~at~is~~v~~~il~~~l~k~~ 150 (235)
T Consensus 374 ~~~~~~~g~lrg~g~~~~~~~~~~~~~~~~~lp~~~~l~~~~~g~~Gvw~~~~~~~~~~~~~~~~~~~~~~ 444 (455)
T COG0534 374 GIQFVLSGVLRGAGDAKIPFIISLLSYWGFRLPLAYLLGFFFLGLAGVWIGFPLSLILRAILLLLRLRRGR 444 (455)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999975258719989999999999999999999888417427669999999999999999999998