HHsearch alignment for GI: peg_477 and conserved domain: COG0728
>COG0728 MviN Uncharacterized membrane protein, putative virulence factor [General function prediction only].
Probab=100.00 E-value=0 Score=260.74 Aligned_cols=216 Identities=29% Similarity=0.405 Sum_probs=189.9
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02677998899629789999999999999999999999999998899999997078988899877777899999999999
Q 537021.9.peg.4 2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGF 81 (235)
Q Consensus 2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~ 81 (235)
T Consensus 290 tvllP~lSr~~~~~~~~~~~~~l~~~i~l~lll~lP~~~~l~~la~piv~~Lf~rG~F~~~d~~~ta~~L~~y~~gL~~~ 369 (518)
T COG0728 290 TVLLPSLSRHAANGDWPEFLKLLDWGLRLTLLLTLPASAGLLVLAEPIVSLLFERGAFTAEDVLMTAEALAAYSLGLIPF 369 (518)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99879999975067659899999999999999999999999998999999995358998577999999999998744899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 65534457787766543345788999988864324553101210231310279999999999999971136666889999
Q 537021.9.peg.4 82 LLSRVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFPFIGGYGIATAEVSWVWVNTICLAVALLKRRQIDLPFQTIYR 161 (235)
Q Consensus 82 ~l~~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~~~g~~G~a~at~is~~v~~~il~~~l~k~~~~~~~~~~~~~ 161 (235)
T Consensus 370 ~L~~ll~~~FYAr~d~ktP~~i~ii~~~~n~~l~~~l~~~~~~~giala~s~a~~~~~~ll~~~l~k~~~~~~~~~~~~~ 449 (518)
T COG0728 370 ALVKLLSRVFYAREDTKTPMKIAIISLVVNILLNLLLIPPLGHVGLALATSLAAWVNALLLYYLLRKRLVYLPGRGWGLF 449 (518)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 99999999999803877376999999999999999978613522999999999999999999999984377862003599
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -99999999999999999999864-320221059999999999999999999999999
Q 537021.9.peg.4 162 -ILSIFISSGLMGMFIVFFKPCLF-NQLSAETAFSPFKNLAIILSGAVLVYLCSISLL 217 (235)
Q Consensus 162 -~~k~~~as~im~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~y~~~~~~~ 217 (235)
T Consensus 450 ~~~k~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 507 (518)
T COG0728 450 LILKLLLASAIMAAALLALLHLAQREWLLGGLLLIRLGVLLLLVLLGAGVYFAMLLLL 507 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999868899999999999999999999999998