HHsearch alignment for GI: peg_477 and conserved domain: PRK00187

>PRK00187 multidrug efflux protein NorA; Provisional.
Probab=99.34  E-value=2.5e-10  Score=69.30  Aligned_cols=146  Identities=14%  Similarity=0.064  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2677998899629789999999999999999999999999998899999997078-988899877777899999999999
Q 537021.9.peg.4    3 ALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERG-AFTAQDTILVSSYLSIYSTEIVGF   81 (235)
Q Consensus         3 allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G-~f~~~~~~~~~~~L~~~~~~l~~~   81 (235)
T Consensus       294 A~~~~vG~~lGa~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~lFt~~~d~~~~evi~l~~~~l~i~~~~~~~~  373 (462)
T PRK00187        294 AVTMRVGQHYGAGRLLEARRAGRVGIGFGAVAMLLFAGLFWLLPEAIIGLFLDRNDPAFAEIVQLAVSLLAVAAWFELFD  373 (462)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999876899999999999999999999999999999999999998628898523999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             655344577877665433457889999-8886432455310--121023131027999999999999997
Q 537021.9.peg.4   82 LLSRVLLSEFYARNDVKTPAKFYILSI-VMGFVIAIGLFPF--IGGYGIATAEVSWVWVNTICLAVALLK  148 (235)
Q Consensus        82 ~l~~il~~~~ya~~~~~~p~~~~~i~~-iini~l~~~li~~--~g~~G~a~at~is~~v~~~il~~~l~k  148 (235)
T Consensus       374 ~~~~v~~g~lrg~G~~~~~~~~~~i~~w~v~vPla~~l~~~~~~G~~GiW~g~~i~~~~~~i~~~~~~~w  443 (462)
T PRK00187        374 GTQTIAMGAIRGLKDARTTFLIGLACYWLVGAPLAWLLAFTLGWGAVGVWWGLALGLACAAVALTLAFEW  443 (462)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999982743999999999999999999999999857992336898999999999999999999