HHsearch alignment for GI: peg_477 and conserved domain: PRK09575
>PRK09575 vmrA multidrug efflux pump VmrA; Reviewed.
Probab=99.92 E-value=8.5e-22 Score=126.33 Aligned_cols=223 Identities=14% Similarity=0.099 Sum_probs=162.5
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79988996297899999999999999999999999999988999999970789888998777778999999999996553
Q 537021.9.peg.4 6 PKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGFLLSR 85 (235)
Q Consensus 6 P~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~~l~~ 85 (235)
T Consensus 77 ~lis~~~G~~~~~~a~~~~~~~~~~~~~~~~i~~~~~~~~~~~il~~l-ga---~~~v~~~a~~Yl~i~~~g~~~~~~~~ 152 (456)
T PRK09575 77 SLLSIYRGEGDLQKAKTILTTGLLLLLLLGPIVSIILWLFADDFLLAQ-GA---EGRTLELGLQYIQVLTWGCLFTIGAI 152 (456)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999769999999999999999999999999999999999999883-97---89999999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCC
Q ss_conf 44577877665433457889999888643245531--012102313102799999999999999711--------36666
Q 537021.9.peg.4 86 VLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFP--FIGGYGIATAEVSWVWVNTICLAVALLKRR--------QIDLP 155 (235)
Q Consensus 86 il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~--~~g~~G~a~at~is~~v~~~il~~~l~k~~--------~~~~~ 155 (235)
T Consensus 153 ~~~~~lra~G~~~~~~~~~i~~~i~NiiLd~lfI~~~~lGv~GAAlATvisq~i~~~~~l~~~~~~~~~l~~~~~~~~~~ 232 (456)
T PRK09575 153 ALPMLVRNDESPNLATGLMVLGALINIVLDYLFIGVLDWGLTGAAIATALAQLVVTILGLGYFFSSRANIKLSLKELLFN 232 (456)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCC
T ss_conf 99999982899830589999977889989999972089986449999999999999999999990686147537631156
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH-----CCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 889999999999999999999999998----6432-----02210599999999999999999-9999999986676899
Q 537021.9.peg.4 156 FQTIYRILSIFISSGLMGMFIVFFKPC----LFNQ-----LSAETAFSPFKNLAIILSGAVLV-YLCSISLLLGKGFLAS 225 (235)
Q Consensus 156 ~~~~~~~~k~~~as~im~~~~~~~~~~----~~~~-----~~~~~~~~~~~~l~~~~~~~~~~-y~~~~~~~~~~~~~~~ 225 (235)
T Consensus 233 ~~~~~~i~~iG~p~~i~~~~~s~~~~~~n~~~~~~g~~~~vAa~~i~~~i~~~~~~~~~Gl~~a~~~lvg~n~GA~~~~r 312 (456)
T PRK09575 233 WSLAPQIVLLGSSSFFMYLYGSFVVALHNRLFMEYGSSLTVGAFAIVGYLMVLYYLVAEGIAEGMQPPVSYYFGARQYDN 312 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 99999999984799999999999999999999997769999999999999999999999998878999999856998899
Q ss_pred HHHHHCC
Q ss_conf 9997305
Q 537021.9.peg.4 226 LKYSLKT 232 (235)
Q Consensus 226 l~~~~r~ 232 (235)
T Consensus 313 v~~~~~~ 319 (456)
T PRK09575 313 IKKLLKL 319 (456)
T ss_pred HHHHHHH
T ss_conf 9999999