HHsearch results for GI: peg_477 and protein with PDBid: 3mkt_A
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.56 E-value=7.1e-14 Score=85.89 Aligned_cols=169 Identities=13% Similarity=0.161 Sum_probs=128.1
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77998899629789999999999999999999999999998899999997078988899877777899999999999655
Q 537021.9.peg.4 5 LPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGFLLS 84 (235)
Q Consensus 5 lP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~~l~ 84 (235)
-+..||+..+||+++.++..++++.....+++|..+.+. ..+++...+ ..+++........+.+..+++++..+.
T Consensus 72 ~~lvaq~~G~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~i~~~~----~~~~~~~~~a~~Y~~~~~~~~~~~~~~ 146 (460)
T 3mkt_A 72 VPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLF-QTQFIIRFM----DVEEAMATKTVGYMHAVIFAVPAYLLF 146 (460)
T ss_dssp GGGCTTTTSSSSTTTHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCSSC----SSTTHHHHHHHHHHTTGGGHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999973999899999999999999999998889986-699999996----253999999876403010013126788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--------
Q ss_conf 344577877665433457889999888643245531------012102313102799999999999999711--------
Q 537021.9.peg.4 85 RVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFP------FIGGYGIATAEVSWVWVNTICLAVALLKRR-------- 150 (235)
Q Consensus 85 ~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~------~~g~~G~a~at~is~~v~~~il~~~l~k~~-------- 150 (235)
..+...+++.+|+|.|++.++.+.++|+++|+.++. ..|..|.++|++++.+........+..++.
T Consensus 147 ~~~~~~l~~~g~~~~~~~~~i~~~i~ni~l~~~li~g~~~~~~~~~~G~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (460)
T 3mkt_A 147 QALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVF 226 (460)
T ss_dssp HHHTTTTCTTSCCTTTHHHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCS
T ss_pred HHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99876520454553157643211332122144101146556651078999998888999854467775530011111210
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --3666688999999999999999999999
Q 537021.9.peg.4 151 --QIDLPFQTIYRILSIFISSGLMGMFIVF 178 (235)
Q Consensus 151 --~~~~~~~~~~~~~k~~~as~im~~~~~~ 178 (235)
..+...+..++..+..+.+.+.......
T Consensus 227 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 256 (460)
T 3mkt_A 227 ETFHKPQPKELIRLFRLGFPVAAALFFEVT 256 (460)
T ss_dssp CCCCSSTTSSTTTSHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 210221456654213357827889999999