HHsearch results for GI: peg_477 and protein with PDBid: 3mkt_A

>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.56  E-value=7.1e-14  Score=85.89  Aligned_cols=169  Identities=13%  Similarity=0.161  Sum_probs=128.1

Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             77998899629789999999999999999999999999998899999997078988899877777899999999999655
Q 537021.9.peg.4    5 LPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGFLLS   84 (235)
Q Consensus         5 lP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~~l~   84 (235)
                      -+..||+..+||+++.++..++++.....+++|..+.+. ..+++...+    ..+++........+.+..+++++..+.
T Consensus        72 ~~lvaq~~G~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~i~~~~----~~~~~~~~~a~~Y~~~~~~~~~~~~~~  146 (460)
T 3mkt_A           72 VPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLF-QTQFIIRFM----DVEEAMATKTVGYMHAVIFAVPAYLLF  146 (460)
T ss_dssp             GGGCTTTTSSSSTTTHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCSSC----SSTTHHHHHHHHHHTTGGGHHHHHHHH
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999973999899999999999999999998889986-699999996----253999999876403010013126788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--------
Q ss_conf             344577877665433457889999888643245531------012102313102799999999999999711--------
Q 537021.9.peg.4   85 RVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFP------FIGGYGIATAEVSWVWVNTICLAVALLKRR--------  150 (235)
Q Consensus        85 ~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~------~~g~~G~a~at~is~~v~~~il~~~l~k~~--------  150 (235)
                      ..+...+++.+|+|.|++.++.+.++|+++|+.++.      ..|..|.++|++++.+........+..++.        
T Consensus       147 ~~~~~~l~~~g~~~~~~~~~i~~~i~ni~l~~~li~g~~~~~~~~~~G~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (460)
T 3mkt_A          147 QALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVF  226 (460)
T ss_dssp             HHHTTTTCTTSCCTTTHHHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCS
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf             99876520454553157643211332122144101146556651078999998888999854467775530011111210


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --3666688999999999999999999999
Q 537021.9.peg.4  151 --QIDLPFQTIYRILSIFISSGLMGMFIVF  178 (235)
Q Consensus       151 --~~~~~~~~~~~~~k~~~as~im~~~~~~  178 (235)
                        ..+...+..++..+..+.+.+.......
T Consensus       227 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  256 (460)
T 3mkt_A          227 ETFHKPQPKELIRLFRLGFPVAAALFFEVT  256 (460)
T ss_dssp             CCCCSSTTSSTTTSHHHHHHHHHHHHHHHH
T ss_pred             HHCCCHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             210221456654213357827889999999