RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= 537021.9.peg.509_1 (45 letters) >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 25.7 bits (56), Expect = 2.8 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 9/37 (24%) Query: 7 ISLKKALIDFSLIS-AHK----KIMAITAKELSKRIS 38 IS LI +I AH K++ T EL + Sbjct: 236 ISC--PLI--GVIQLAHYVVTAKLLGFTPGELRSYLK 268 Score = 25.3 bits (55), Expect = 3.5 Identities = 6/24 (25%), Positives = 10/24 (41%), Gaps = 3/24 (12%) Query: 24 KIMAITAKEL--SKRISISRCINA 45 + T L K++ IS +N Sbjct: 351 DYVNKTNSHLPAGKQVEIS-LVNG 373 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.323 0.132 0.338 Gapped Lambda K H 0.267 0.0648 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 328,742 Number of extensions: 8864 Number of successful extensions: 36 Number of sequences better than 10.0: 1 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 4 Length of query: 45 Length of database: 5,693,230 Length adjustment: 18 Effective length of query: 27 Effective length of database: 5,256,838 Effective search space: 141934626 Effective search space used: 141934626 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 50 (23.2 bits)