BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 537021.9.peg.532_1 (38 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >537021.9.peg.532_1 Length = 38 Score = 72.0 bits (175), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 38/38 (100%), Positives = 38/38 (100%) Query: 1 LQLIIRLCLLQWETFLWIFIIVQSFYLQQRNGFLSILI 38 LQLIIRLCLLQWETFLWIFIIVQSFYLQQRNGFLSILI Sbjct: 1 LQLIIRLCLLQWETFLWIFIIVQSFYLQQRNGFLSILI 38 >gi|254781093|ref|YP_003065506.1| hypothetical protein CLIBASIA_04975 [Candidatus Liberibacter asiaticus str. psy62] Length = 225 Score = 23.5 bits (49), Expect = 0.64, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 13/17 (76%) Query: 20 IIVQSFYLQQRNGFLSI 36 I+ Q FYL Q+ GF+S+ Sbjct: 45 IVYQLFYLFQQRGFVSL 61 >gi|254781013|ref|YP_003065426.1| phage-associated protein [Candidatus Liberibacter asiaticus str. psy62] Length = 302 Score = 20.4 bits (41), Expect = 6.2, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%) Query: 12 WETFLWIFIIVQSFYLQQ 29 W T +WI IIV +F L Q Sbjct: 240 WVTIVWITIIV-AFLLTQ 256 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.343 0.154 0.514 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,464 Number of Sequences: 1233 Number of extensions: 446 Number of successful extensions: 5 Number of sequences better than 100.0: 4 Number of HSP's better than 100.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of query: 38 length of database: 328,796 effective HSP length: 12 effective length of query: 26 effective length of database: 314,000 effective search space: 8164000 effective search space used: 8164000 T: 11 A: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 38 (21.5 bits) S2: 31 (16.5 bits)