Query 537021.9.peg.54_1
Match_columns 64
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Sun May 22 21:34:56 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_54.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s12a_ d.64.2.1 (A:) Hypothet 40.1 6.7 0.00049 17.8 1.9 39 19-57 47-94 (94)
2 d2od6a1 d.58.4.22 (A:1-109) Hy 12.7 45 0.0032 13.5 1.7 20 17-36 37-57 (109)
3 d1m94a_ d.15.1.1 (A:) Ubiquiti 10.7 49 0.0036 13.3 1.4 18 38-64 56-73 (73)
4 d2izva1 a.271.1.1 (A:386-429) 8.0 43 0.0031 13.6 0.2 13 35-47 30-42 (44)
5 d1kz7a2 b.55.1.1 (A:819-965) D 5.2 71 0.0052 12.4 0.1 30 19-48 48-77 (147)
6 d1g1pa_ g.3.6.1 (A:) Conotoxin 4.6 45 0.0033 13.5 -1.2 14 12-25 8-21 (32)
7 d2uubs1 d.28.1.1 (S:2-81) Ribo 4.0 60 0.0044 12.8 -1.0 17 27-44 29-45 (80)
8 d2c7fa1 b.71.1.2 (A:2-16,A:387 3.7 59 0.0043 12.9 -1.3 11 36-46 5-15 (131)
9 d2gxba1 a.4.5.19 (A:140-198) Z 3.3 1.4E+02 0.01 10.9 0.9 12 15-26 37-48 (59)
10 d2g0ia1 d.64.2.1 (A:1-111) Hyp 3.2 1.5E+02 0.011 10.8 1.2 34 22-55 65-111 (111)
No 1
>d1s12a_ d.64.2.1 (A:) Hypothetical protein TM1457 {Thermotoga maritima [TaxId: 2336]}
Probab=40.11 E-value=6.7 Score=17.78 Aligned_cols=39 Identities=18% Similarity=0.365 Sum_probs=31.8
Q ss_pred HHCCEEEEEEEEEECHHHHHHHH---------CCCCEEEEEEEEECCC
Q ss_conf 40360488889861213778863---------0200146899983285
Q 537021.9.peg.5 19 LKKGLLCCKIRIWNQRSQTILKS---------YRYKQVCKIQIIQEGS 57 (64)
Q Consensus 19 lkkgllcckiriwnqrsqtilks---------yrykqvckiqiiqegs 57 (64)
.+.|.+.|.+.--++..|.+|++ ..|.+-.++.++.+||
T Consensus 47 ~~~G~l~~~~~~~~~~~q~ll~~m~~gL~~i~~~Yp~~Iki~v~e~~~ 94 (94)
T d1s12a_ 47 KESGYLKVKFEELENCEVKVLAAMVRSLKELEQKFPSQIRVEVIDNGS 94 (94)
T ss_dssp EETTEEEEEECSCCHHHHHHHHHHHHHHHHHHHHSTTTEEEEECCCCC
T ss_pred EECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 518789999789797999999999999999998674638999846889
No 2
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=12.68 E-value=45 Score=13.51 Aligned_cols=20 Identities=30% Similarity=0.685 Sum_probs=14.4
Q ss_pred HHHHCCEEEEEE-EEEECHHH
Q ss_conf 864036048888-98612137
Q 537021.9.peg.5 17 SFLKKGLLCCKI-RIWNQRSQ 36 (64)
Q Consensus 17 sflkkgllccki-riwnqrsq 36 (64)
.+-+.|++-..+ ||||+..+
T Consensus 37 ~Lk~~Gl~r~~~~~iwNk~~~ 57 (109)
T d2od6a1 37 EMKSRGLLKFSMNRVWNKGEV 57 (109)
T ss_dssp HHHTTTEEEEEEEEECSSSSC
T ss_pred HHHHCCCCEEEEEEEECCCCC
T ss_conf 998769830799988377884
No 3
>d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=10.75 E-value=49 Score=13.29 Aligned_cols=18 Identities=28% Similarity=0.744 Sum_probs=13.8
Q ss_pred HHHHCCCCEEEEEEEEECCCEEEEEEC
Q ss_conf 886302001468999832857999979
Q 537021.9.peg.5 38 ILKSYRYKQVCKIQIIQEGSALLLFYI 64 (64)
Q Consensus 38 ilksyrykqvckiqiiqegsalllfyi 64 (64)
.|.+|. |++||.+-|||.
T Consensus 56 tL~~y~---------I~~gstl~L~~~ 73 (73)
T d1m94a_ 56 SLEDYE---------VHDQTNLELYYL 73 (73)
T ss_dssp BHHHHT---------CCTTEEEEEEEC
T ss_pred CHHHCC---------CCCCCEEEEEEC
T ss_conf 677729---------999999999979
No 4
>d2izva1 a.271.1.1 (A:386-429) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.00 E-value=43 Score=13.61 Aligned_cols=13 Identities=38% Similarity=0.600 Sum_probs=9.0
Q ss_pred HHHHHHHCCCCEE
Q ss_conf 3778863020014
Q 537021.9.peg.5 35 SQTILKSYRYKQV 47 (64)
Q Consensus 35 sqtilksyrykqv 47 (64)
-..-|++|.|||-
T Consensus 30 Lk~yLkeyhYkq~ 42 (44)
T d2izva1 30 MKLYLKEYHYKSK 42 (44)
T ss_dssp HHHHHTSSEEEEC
T ss_pred HHHHHHHCCCCCC
T ss_conf 9999986656322
No 5
>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.21 E-value=71 Score=12.45 Aligned_cols=30 Identities=37% Similarity=0.414 Sum_probs=20.4
Q ss_pred HHCCEEEEEEEEEECHHHHHHHHCCCCEEE
Q ss_conf 403604888898612137788630200146
Q 537021.9.peg.5 19 LKKGLLCCKIRIWNQRSQTILKSYRYKQVC 48 (64)
Q Consensus 19 lkkgllcckiriwnqrsqtilksyrykqvc 48 (64)
..+-|++||.+-++.+..+....|+|+...
T Consensus 48 F~~~Li~cK~~~~~~~~~~~~~~y~~k~~~ 77 (147)
T d1kz7a2 48 HEKAVLFCKKREENGEGYEKAPSYSYKQSL 77 (147)
T ss_dssp ESSEEEEEEEECCCCSSCCCSCEEEEEEEE
T ss_pred ECCCEEEEEECCCCCCCCCCCCEEEEEEEE
T ss_conf 227289997314677665568548996688
No 6
>d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]}
Probab=4.56 E-value=45 Score=13.46 Aligned_cols=14 Identities=50% Similarity=0.857 Sum_probs=10.0
Q ss_pred HHHHHHHHHCCEEE
Q ss_conf 44207864036048
Q 537021.9.peg.5 12 LYMSLSFLKKGLLC 25 (64)
Q Consensus 12 lymslsflkkgllc 25 (64)
-+-||..||.||-|
T Consensus 8 gfcslpilknglcc 21 (32)
T d1g1pa_ 8 GFCSLPILKNGLCC 21 (32)
T ss_dssp SBCCCSSSSCCCBT
T ss_pred CCEECHHHCCCCCC
T ss_conf 51503333577100
No 7
>d2uubs1 d.28.1.1 (S:2-81) Ribosomal protein S19 {Thermus thermophilus [TaxId: 274]}
Probab=3.98 E-value=60 Score=12.82 Aligned_cols=17 Identities=35% Similarity=0.573 Sum_probs=11.4
Q ss_pred EEEEEECHHHHHHHHCCC
Q ss_conf 889861213778863020
Q 537021.9.peg.5 27 KIRIWNQRSQTILKSYRY 44 (64)
Q Consensus 27 kiriwnqrsqtilksyry 44 (64)
.|+.|..+| +|+-.+--
T Consensus 29 ~IkT~sR~s-~IlP~~VG 45 (80)
T d2uubs1 29 LIKTWSRRS-TIVPEMVG 45 (80)
T ss_dssp EEEECCSSS-BCCGGGTT
T ss_pred CEEEECCCC-EECHHHCC
T ss_conf 576851666-80667816
No 8
>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]}
Probab=3.65 E-value=59 Score=12.88 Aligned_cols=11 Identities=27% Similarity=0.467 Sum_probs=5.9
Q ss_pred HHHHHHCCCCE
Q ss_conf 77886302001
Q 537021.9.peg.5 36 QTILKSYRYKQ 46 (64)
Q Consensus 36 qtilksyrykq 46 (64)
|||.|-|||-+
T Consensus 5 ~~~~~~~k~~r 15 (131)
T d2c7fa1 5 MTVDKDYKIAE 15 (131)
T ss_dssp EEECTTCEEEE
T ss_pred HHEEEHHHHCC
T ss_conf 31101000158
No 9
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.28 E-value=1.4e+02 Score=10.85 Aligned_cols=12 Identities=42% Similarity=0.296 Sum_probs=9.0
Q ss_pred HHHHHHCCEEEE
Q ss_conf 078640360488
Q 537021.9.peg.5 15 SLSFLKKGLLCC 26 (64)
Q Consensus 15 slsflkkgllcc 26 (64)
-.||.++|.+|-
T Consensus 37 LYsL~~kgkl~k 48 (59)
T d2gxba1 37 LYSLAKKGKLQK 48 (59)
T ss_dssp HHHHHHTTSEEE
T ss_pred HHHHHHCCCHHH
T ss_conf 999997552653
No 10
>d2g0ia1 d.64.2.1 (A:1-111) Hypothetical protein Smu.848 {Streptococcus mutans [TaxId: 1309]}
Probab=3.22 E-value=1.5e+02 Score=10.82 Aligned_cols=34 Identities=9% Similarity=0.243 Sum_probs=0.0
Q ss_pred CEEEEEEEE----EECHHHHHHH---------HCCCCEEEEEEEEEC
Q ss_conf 604888898----6121377886---------302001468999832
Q 537021.9.peg.5 22 GLLCCKIRI----WNQRSQTILK---------SYRYKQVCKIQIIQE 55 (64)
Q Consensus 22 gllcckiri----wnqrsqtilk---------syrykqvckiqiiqe 55 (64)
|.+.|.+.. -++..|.+++ ...|.+-.+++++.|
T Consensus 65 G~l~~~l~~~~~~~~~~~q~ll~sl~~gL~~i~~~Yp~~I~i~~~~~ 111 (111)
T d2g0ia1 65 GYMKIDLSYITNKSDEKVQLLFEAFLLGITNLAENSPEFVTAKIMTQ 111 (111)
T ss_dssp CEEEEECTTCTTTTCHHHHHHHHHHHHHHHHHHHHCTTTEEEEEEEC
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 55999983688531589999999999999999986654379999709
Done!