RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= 537021.9.peg.574_1 (51 letters) >d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Length = 214 Score = 23.4 bits (50), Expect = 5.8 Identities = 11/46 (23%), Positives = 16/46 (34%) Query: 1 MKYKEKYGKNRNISFIPIIIIVLSKKISMPFVHSMLRAGLRPPCIF 46 + + G + P ISM V ++LR G PP Sbjct: 156 VFHCPLCGGIASERTCPEGHREKRTAISMTKVRALLREGKAPPSEL 201 >d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 Score = 22.8 bits (49), Expect = 7.2 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 31 FVHSMLRAGLRPPCIFCI 48 +V S+LR GL P I Sbjct: 308 YVESVLRYGLPPHFNIKI 325 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.334 0.148 0.465 Gapped Lambda K H 0.267 0.0681 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 202,839 Number of extensions: 6423 Number of successful extensions: 34 Number of sequences better than 10.0: 1 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 10 Length of query: 51 Length of database: 2,407,596 Length adjustment: 22 Effective length of query: 29 Effective length of database: 2,105,536 Effective search space: 61060544 Effective search space used: 61060544 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 47 (22.0 bits)