Query 537021.9.peg.577_1 Match_columns 44 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 33803 Date Tue May 24 22:15:31 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_577.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >1g9k_A Serralysin; beta jelly 6.1 1.3E+02 0.0038 14.8 -0.1 23 8-30 11-34 (72) 2 >3d55_A Antitoxin, uncharacter 5.4 2.2E+02 0.0064 13.7 0.7 11 32-42 21-31 (39) 3 >6rlx_B Relaxin, B-chain; horm 5.1 1.1E+02 0.0032 15.1 -1.0 11 1-11 3-13 (28) 4 >2o9c_A Bacteriophytochrome; p 4.6 2.1E+02 0.0063 13.8 0.2 13 31-43 38-50 (246) 5 >2fkn_A Urocanate hydratase; r 4.2 1.9E+02 0.0057 14.0 -0.2 31 8-40 74-104 (216) 6 >3cu0_A Galactosylgalactosylxy 3.9 2.7E+02 0.008 13.3 0.3 21 21-41 40-60 (118) 7 >1uwk_A Urocanate hydratase; h 3.6 2.3E+02 0.0068 13.6 -0.3 32 7-40 73-104 (216) 8 >3fdb_A Beta C-S lyase, putati 3.5 1.1E+02 0.0034 15.0 -1.9 36 6-42 18-53 (62) 9 >1mlw_A Tryptophan 5-monooxyge 3.5 1.9E+02 0.0058 13.9 -0.7 18 22-39 11-28 (78) 10 >1toh_A Tyroh, tyrosine hydrox 3.5 1.9E+02 0.0058 13.9 -0.7 12 25-36 14-25 (79) No 1 >>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} (A:19-48,A:205-246) Probab=6.12 E-value=1.3e+02 Score=14.76 Aligned_cols=23 Identities=30% Similarity=0.560 Sum_probs=12.8 Q ss_pred CCCCCEEHHH-HHHHHHCCEEEEC Q ss_conf 2655100345-6420100011103 Q 537021.9.peg.5 8 YGYNTKIVSD-LHTGIASWHTIEA 30 (44) Q Consensus 8 ygyntkivsd-lhtgiaswhtiea 30 (44) -.+.+.-+.| |...-||||++-. T Consensus 11 ~~~~~~~~~~~~~~~~~~~~SVMS 34 (72) T 1g9k_A 11 PSFTVDQVADQLTRSGASWHSVMS 34 (72) T ss_dssp ECCCHHHHHHHHTTTCCCCCCTTC T ss_pred CCCCCCHHHHHHHCCCCCCCEEEE T ss_conf 355420578876206774020464 No 2 >>3d55_A Antitoxin, uncharacterized protein RV3357/MT3465; tetramer, toxin neutraliSer, toxin inhibitor; 2.13A {Mycobacterium tuberculosis} PDB: 3cto_A (A:1-39) Probab=5.36 E-value=2.2e+02 Score=13.74 Aligned_cols=11 Identities=18% Similarity=0.749 Sum_probs=8.4 Q ss_pred CCCCCEEEEEE Q ss_conf 64475343113 Q 537021.9.peg.5 32 AEKEPISISGK 42 (44) Q Consensus 32 aekepisisgk 42 (44) ...+||-|+|| T Consensus 21 ~~H~Pi~I~gk 31 (39) T 3d55_A 21 TDHQPVRITSR 31 (39) T ss_dssp HHCCCEEEECT T ss_pred CCCCEEEEEEC T ss_conf 56973899837 No 3 >>6rlx_B Relaxin, B-chain; hormone(muscle relaxant); 1.50A {Homo sapiens} (B:) Probab=5.08 E-value=1.1e+02 Score=15.10 Aligned_cols=11 Identities=45% Similarity=0.607 Sum_probs=6.8 Q ss_pred CCHHHHCCCCC Q ss_conf 93012022655 Q 537021.9.peg.5 1 MDEVIGSYGYN 11 (44) Q Consensus 1 mdevigsygyn 11 (44) |||||--.|-. T Consensus 3 mdevik~cgre 13 (28) T 6rlx_B 3 MEEVIKLCGRE 13 (28) T ss_dssp GGCEECCCHHH T ss_pred HHHHHHHHHHH T ss_conf 88999997599 No 4 >>2o9c_A Bacteriophytochrome; phytochrome chromophore, figure-OF-eight knot, phytochromobilin, biliverdin, PAS, GAF, transferase; HET: LBV; 1.45A {Deinococcus radiodurans} (A:1-52,A:149-342) Probab=4.59 E-value=2.1e+02 Score=13.77 Aligned_cols=13 Identities=54% Similarity=0.956 Sum_probs=8.9 Q ss_pred CCCCCCEEEEEEE Q ss_conf 7644753431132 Q 537021.9.peg.5 31 GAEKEPISISGKI 43 (44) Q Consensus 31 gaekepisisgki 43 (44) ..++|||.|-|.| T Consensus 38 ~~~~~~~~~~~~~ 50 (246) T 2o9c_A 38 NCEREPIHIPGSI 50 (246) T ss_dssp TGGGCCTTCCSEE T ss_pred CCCCCCCCCCCCC T ss_conf 5151003687752 No 5 >>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis} (A:132-347) Probab=4.23 E-value=1.9e+02 Score=13.95 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=22.1 Q ss_pred CCCCCEEHHHHHHHHHCCEEEECCCCCCCEEEE Q ss_conf 265510034564201000111037644753431 Q 537021.9.peg.5 8 YGYNTKIVSDLHTGIASWHTIEAGAEKEPISIS 40 (44) Q Consensus 8 ygyntkivsdlhtgiaswhtieagaekepisis 40 (44) -||-.++..||..-++- -.+|-++|+|+||. T Consensus 74 ~gyld~~~~~Ldeal~~--~~~a~~~~~~~SIg 104 (216) T 2fkn_A 74 TKYCDRKTASIEEALAW--AEEAKLAGKPLSIA 104 (216) T ss_dssp TTSCSEEESCHHHHHHH--HHHHHHTTCCEEEE T ss_pred CCCCEEECCCHHHHHHH--HHHHHHCCCCEEEE T ss_conf 78853684899999999--99998729944999 No 6 >>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} (A:142-259) Probab=3.91 E-value=2.7e+02 Score=13.31 Aligned_cols=21 Identities=19% Similarity=0.420 Sum_probs=16.8 Q ss_pred HHHCCEEEECCCCCCCEEEEE Q ss_conf 010001110376447534311 Q 537021.9.peg.5 21 GIASWHTIEAGAEKEPISISG 41 (44) Q Consensus 21 giaswhtieagaekepisisg 41 (44) .+.+||+......+-||..+| T Consensus 40 kv~gw~~~w~~~R~fpidmAG 60 (118) T 3cu0_A 40 RVVGFHTAWEPSRPFPVDMAG 60 (118) T ss_dssp EEEEEECCSSTTCSSCCCGGG T ss_pred EEEEEECCCCCCCCCCCCCEE T ss_conf 366676578888986532111 No 7 >>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} (A:136-351) Probab=3.61 E-value=2.3e+02 Score=13.63 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=22.6 Q ss_pred CCCCCCEEHHHHHHHHHCCEEEECCCCCCCEEEE Q ss_conf 2265510034564201000111037644753431 Q 537021.9.peg.5 7 SYGYNTKIVSDLHTGIASWHTIEAGAEKEPISIS 40 (44) Q Consensus 7 sygyntkivsdlhtgiaswhtieagaekepisis 40 (44) .-||-.++..||..-++- --+|-++|+|+||. T Consensus 73 ~~gyld~~~~~ldeal~~--~~~a~~~~~~~SIg 104 (216) T 1uwk_A 73 ETRYVDEQATDLDDALVR--IAKYTAEGKAISIA 104 (216) T ss_dssp HTTSCCEECSSHHHHHHH--HHHHHHTTCCCEEE T ss_pred HCCCCEEEECCHHHHHHH--HHHHHHCCCCEEEE T ss_conf 548641461889999999--99987549863787 No 8 >>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; NP_940074.1, structural genomics, joint center for structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} (A:35-78,A:254-271) Probab=3.54 E-value=1.1e+02 Score=14.97 Aligned_cols=36 Identities=25% Similarity=0.255 Sum_probs=26.3 Q ss_pred HCCCCCCEEHHHHHHHHHCCEEEECCCCCCCEEEEEE Q ss_conf 0226551003456420100011103764475343113 Q 537021.9.peg.5 6 GSYGYNTKIVSDLHTGIASWHTIEAGAEKEPISISGK 42 (44) Q Consensus 6 gsygyntkivsdlhtgiaswhtieagaekepisisgk 42 (44) |.|||. ..-.++-..|+.|..-.-|-+|.--|.-|- T Consensus 18 gifGYt-~~~~~y~~AI~~W~k~Rhgwe~~~~~~~~~ 53 (62) T 3fdb_A 18 EAFGYQ-PDGSLLSQATAEFYADRYGYQKDGASTLGL 53 (62) T ss_dssp TCCSSC-CSSCCHHHHHHHHHHHHHCCCHCCCCHHHH T ss_pred CCCCCC-CCCCHHHHHHHHHHHHHCCCCCCCCCCHHH T ss_conf 997899-984099999999999872999232110226 No 9 >>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} (A:199-276) Probab=3.49 E-value=1.9e+02 Score=13.94 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=12.1 Q ss_pred HHCCEEEECCCCCCCEEE Q ss_conf 100011103764475343 Q 537021.9.peg.5 22 IASWHTIEAGAEKEPISI 39 (44) Q Consensus 22 iaswhtieagaekepisi 39 (44) ---|.|+|-|.-+|+=.+ T Consensus 11 rlyWfTVEFGLi~e~g~~ 28 (78) T 1mlw_A 11 TCYFFTVEFGLCKQDGQL 28 (78) T ss_dssp HHHHTTTTTCEEEETTEE T ss_pred HEEEEEEEEEEECCCCCC T ss_conf 320266766676458971 No 10 >>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, pterin CO-substrate; 2.30A {Rattus norvegicus} (A:204-282) Probab=3.49 E-value=1.9e+02 Score=13.94 Aligned_cols=12 Identities=42% Similarity=0.761 Sum_probs=0.0 Q ss_pred CEEEECCCCCCC Q ss_conf 011103764475 Q 537021.9.peg.5 25 WHTIEAGAEKEP 36 (44) Q Consensus 25 whtieagaekep 36 (44) |.|+|-|.-+|+ T Consensus 14 WfTVEFGLi~e~ 25 (79) T 1toh_A 14 WFTVEFGLCKQN 25 (79) T ss_dssp HTTTTTCEEEET T ss_pred EEEEEEEEECCC T ss_conf 377864355258 Done!