Query 537021.9.peg.582_1
Match_columns 37
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 23785
Date Tue May 24 21:40:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_582.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gix_A Inward rectifier potass 8.5 84 0.0035 14.5 0.7 17 14-30 8-25 (208)
2 3lb9_A Endo-1,4-beta-xylanase; 3.1 2.3E+02 0.0098 12.4 0.1 13 19-31 1-13 (182)
3 1m45_B IQ2, IQ2 motif from MYO 3.1 3.3E+02 0.014 11.7 1.0 15 4-18 9-23 (26)
4 3gwc_A TS, tsase, thymidylate 3.1 1.7E+02 0.0073 13.0 -0.6 27 4-36 90-120 (258)
5 3kbh_E Spike glycoprotein; bet 2.7 2.6E+02 0.011 12.2 0.0 10 20-29 76-85 (136)
6 1te1_B GH11, endo-1,4-xylanase 2.6 3.2E+02 0.014 11.7 0.4 17 16-32 129-145 (190)
7 2vgd_A Enxyn11A; glycoside hyd 2.5 3.1E+02 0.013 11.8 0.2 16 17-32 155-170 (218)
8 1f5j_A Beta-1,4-xylanase; beta 2.5 3E+02 0.013 11.9 0.1 16 17-32 133-148 (199)
9 3l4c_A Dedicator of cytokinesi 2.4 4E+02 0.017 11.3 1.0 14 12-25 83-96 (220)
10 2z79_A Endo-1,4-beta-xylanase 2.4 3E+02 0.013 11.9 -0.0 16 18-33 122-137 (185)
No 1
>2gix_A Inward rectifier potassium channel 2; cytoplasmic domains of KIR2.1, andersen'S mutation, metal transport; 2.02A {Mus musculus}
Probab=8.47 E-value=84 Score=14.55 Aligned_cols=17 Identities=35% Similarity=0.726 Sum_probs=11.1
Q ss_pred HCCCCCCHH-HEEECCCC
Q ss_conf 100443422-30301444
Q 537021.9.peg.5 14 FQEKNAHFN-QYISFSQD 30 (37)
Q Consensus 14 fqeknahfn-qyisfsqd 30 (37)
|-.|..|.| ||++||+.
T Consensus 8 ~~~~~~~~~~~~~~~~~k 25 (208)
T 2gix_A 8 FVKKDGHCNVQFINVGEK 25 (208)
T ss_dssp SBCTTSCBCEEEECCCCS
T ss_pred EECCCCCEEEEEEECCCC
T ss_conf 214689277999660788
No 2
>3lb9_A Endo-1,4-beta-xylanase; BCX, permutation, glycosidase, xylan degradation, hydrolase; 3.00A {Bacillus circulans}
Probab=3.10 E-value=2.3e+02 Score=12.43 Aligned_cols=13 Identities=54% Similarity=0.687 Sum_probs=7.3
Q ss_pred CCHHHEEECCCCE
Q ss_conf 3422303014442
Q 537021.9.peg.5 19 AHFNQYISFSQDK 31 (37)
Q Consensus 19 ahfnqyisfsqdk 31 (37)
|.|.||.|..|.|
T Consensus 1 ~tF~Qy~SvR~~k 13 (182)
T 3lb9_A 1 ATFTQYWSVRQSK 13 (182)
T ss_dssp CEEEEEEEEESSC
T ss_pred CCEEEEEEEECCC
T ss_conf 9416358884267
No 3
>1m45_B IQ2, IQ2 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae}
Probab=3.08 E-value=3.3e+02 Score=11.72 Aligned_cols=15 Identities=47% Similarity=0.549 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 899998877510044
Q 537021.9.peg.5 4 LHQIIKHFILFQEKN 18 (37)
Q Consensus 4 lhqiikhfilfqekn 18 (37)
|..-||.||.-|.-|
T Consensus 9 lqnnikgfiirqrvn 23 (26)
T 1m45_B 9 LQNNIKGFIIRQRVN 23 (26)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEEEEECC
T ss_conf 983564478756415
No 4
>3gwc_A TS, tsase, thymidylate synthase THYX; FAD, fdump, flavoprotein, methyltransferase, nucleotide biosynthesis, transferase; HET: FAD UFP; 1.90A {Mycobacterium tuberculosis} PDB: 3hzg_A* 2af6_A* 2gq2_A*
Probab=3.06 E-value=1.7e+02 Score=13.04 Aligned_cols=27 Identities=26% Similarity=0.641 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHCCCCCCHHH----EEECCCCEEEECC
Q ss_conf 89999887751004434223----0301444265217
Q 537021.9.peg.5 4 LHQIIKHFILFQEKNAHFNQ----YISFSQDKIVIPS 36 (37)
Q Consensus 4 lhqiikhfilfqeknahfnq----yisfsqdkivips 36 (37)
.||+++|=+ +.||| |+.++....++|.
T Consensus 90 ~~Ql~RHR~------~Sf~e~SqRYv~~~~~~~v~P~ 120 (258)
T 3gwc_A 90 THELIRHRH------FSYSQLSQRYVPEKDSRVVVPP 120 (258)
T ss_dssp HHHHTTCTT------SEEEECCTTTSCCTTCCBCCCG
T ss_pred HHHHHHCCC------CCCCCCCCCCCCCCCCCEECCH
T ss_conf 999986366------7512236575367786034680
No 5
>3kbh_E Spike glycoprotein; beta sandwich, coiled coil, envelope protein, fusion protein, HOST-virus interaction, membrane, transmembrane, virion; HET: NAG; 3.31A {Human coronavirus NL63}
Probab=2.74 E-value=2.6e+02 Score=12.23 Aligned_cols=10 Identities=20% Similarity=0.584 Sum_probs=6.3
Q ss_pred CHHHEEECCC
Q ss_conf 4223030144
Q 537021.9.peg.5 20 HFNQYISFSQ 29 (37)
Q Consensus 20 hfnqyisfsq 29 (37)
.+|.|++|++
T Consensus 76 ~lNNyLsF~~ 85 (136)
T 3kbh_E 76 KLNNFQKFKT 85 (136)
T ss_dssp ----------
T ss_pred HHCCCCCEEE
T ss_conf 9637562515
No 6
>1te1_B GH11, endo-1,4-xylanase; beta/alpha barrel (XIP-I) and beta jelly roll (GH11), hydrolase inhibitor/hydrolase complex; HET: NAG; 2.50A {Penicillium funiculosum} SCOP: b.29.1.11
Probab=2.59 E-value=3.2e+02 Score=11.73 Aligned_cols=17 Identities=41% Similarity=0.567 Sum_probs=12.3
Q ss_pred CCCCCHHHEEECCCCEE
Q ss_conf 04434223030144426
Q 537021.9.peg.5 16 EKNAHFNQYISFSQDKI 32 (37)
Q Consensus 16 eknahfnqyisfsqdki 32 (37)
+-++-|.||.|..|.|-
T Consensus 129 ~Gt~TF~QYwSVR~~~R 145 (190)
T 1te1_B 129 EGTSTFNQYWSVRTEKR 145 (190)
T ss_dssp TSSEEEEEEEECCSSCC
T ss_pred CCCCCEEEEEEECCCCC
T ss_conf 77734688799737998
No 7
>2vgd_A Enxyn11A; glycoside hydrolase, xylanase, beta jelly roll, hydrolase; HET: XYP FX3; 1.8A {Escherichia coli} PDB: 2vuj_A 2vul_A*
Probab=2.51 E-value=3.1e+02 Score=11.80 Aligned_cols=16 Identities=50% Similarity=0.526 Sum_probs=11.8
Q ss_pred CCCCHHHEEECCCCEE
Q ss_conf 4434223030144426
Q 537021.9.peg.5 17 KNAHFNQYISFSQDKI 32 (37)
Q Consensus 17 knahfnqyisfsqdki 32 (37)
-++.|.||.|..|.|-
T Consensus 155 Gt~TF~QYwSVR~~kR 170 (218)
T 2vgd_A 155 GNATFYQYWSVRQSKR 170 (218)
T ss_dssp SSEEEEEEEEEESSCC
T ss_pred CCCCEEEEEEECCCCC
T ss_conf 8734584179756898
No 8
>1f5j_A Beta-1,4-xylanase; beta-barrel, hydrolase; 1.80A {Dictyoglomus thermophilum} SCOP: b.29.1.11
Probab=2.48 E-value=3e+02 Score=11.88 Aligned_cols=16 Identities=38% Similarity=0.476 Sum_probs=11.3
Q ss_pred CCCCHHHEEECCCCEE
Q ss_conf 4434223030144426
Q 537021.9.peg.5 17 KNAHFNQYISFSQDKI 32 (37)
Q Consensus 17 knahfnqyisfsqdki 32 (37)
-++-|.||.|..|.|-
T Consensus 133 Gt~TF~QYwSVR~~~R 148 (199)
T 1f5j_A 133 GTATFDQYWSVRTSKR 148 (199)
T ss_dssp SSEEEEEEEEEESSCC
T ss_pred CCCCCEEEEEECCCCC
T ss_conf 7665234588625898
No 9
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=2.42 E-value=4e+02 Score=11.31 Aligned_cols=14 Identities=21% Similarity=0.432 Sum_probs=7.6
Q ss_pred HHHCCCCCCHHHEE
Q ss_conf 75100443422303
Q 537021.9.peg.5 12 ILFQEKNAHFNQYI 25 (37)
Q Consensus 12 ilfqeknahfnqyi 25 (37)
|++++++..||+-|
T Consensus 83 V~yh~~~P~w~eei 96 (220)
T 3l4c_A 83 IYYQVKQPRWFETV 96 (220)
T ss_dssp CCTTCSSCCCCEEE
T ss_pred EEEECCCCCCCEEE
T ss_conf 99708999975548
No 10
>2z79_A Endo-1,4-beta-xylanase A; glycoside hydrolase, glycosidase, xylan degradation; 1.30A {Bacillus subtilis} PDB: 2qz3_A 2dcy_A* 1xxn_A* 1bcx_A* 1xnb_A 1bvv_A 2b42_B 3hd8_B 1hv0_A 2bvv_A 1c5h_A 1c5i_A 1hv1_A 1xnc_A 2dcz_A 3exu_A* 2b46_X* 2b45_X*
Probab=2.38 E-value=3e+02 Score=11.90 Aligned_cols=16 Identities=38% Similarity=0.441 Sum_probs=11.9
Q ss_pred CCCHHHEEECCCCEEE
Q ss_conf 4342230301444265
Q 537021.9.peg.5 18 NAHFNQYISFSQDKIV 33 (37)
Q Consensus 18 nahfnqyisfsqdkiv 33 (37)
++-|.||.|..|.|-.
T Consensus 122 ~~TF~QYwSVR~~~R~ 137 (185)
T 2z79_A 122 RTTFTQYWSVRQSKRP 137 (185)
T ss_dssp EEEEEEEEEEESSCCC
T ss_pred CCCEEEEEEECCCCCC
T ss_conf 6668778997337888
Done!