RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= 537021.9.peg.582_1
         (37 letters)



>1jr8_A ERV2 protein, mitochondrial; FAD, sulfhydryl oxidase,
          helical bundle, CXXC, oxidoreductase; HET: FAD; 1.50A
          {Saccharomyces cerevisiae} (A:)
          Length = 117

 Score = 24.1 bits (52), Expect = 7.7
 Identities = 4/31 (12%), Positives = 9/31 (29%)

Query: 1  MLRLHQIIKHFILFQEKNAHFNQYISFSQDK 31
          +     +        E + HF + I     +
Sbjct: 38 LHTFIGLYAELYPCGECSYHFVKLIEKYPVQ 68


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.331    0.142    0.410 

Gapped
Lambda     K      H
   0.267   0.0611    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 266,159
Number of extensions: 5976
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 37
Length of database: 4,956,049
Length adjustment: 10
Effective length of query: 27
Effective length of database: 4,617,999
Effective search space: 124685973
Effective search space used: 124685973
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 50 (23.3 bits)