Query 537021.9.peg.593_1
Match_columns 38
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 23785
Date Tue May 24 22:20:37 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_593.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i9s_A MESD, mesoderm developm 15.7 56 0.0024 14.8 1.7 11 2-12 18-28 (97)
2 2kgl_A Mesoderm development ca 12.3 70 0.0029 14.4 1.4 11 2-12 76-86 (195)
3 1x99_A Lectin, XCL lectin; fun 10.7 1E+02 0.0043 13.6 3.5 24 2-25 56-79 (145)
4 3lgo_A Protein SLM4; roadblock 5.4 66 0.0028 14.5 -1.1 29 1-35 137-165 (172)
5 2ofc_A Sclerotium rolfsii lect 5.3 1.9E+02 0.0081 12.3 3.5 24 2-25 53-76 (142)
6 1vps_A Polyomavirus VP1 pentam 4.1 2.4E+02 0.0099 11.9 2.5 20 2-21 130-149 (289)
7 1v95_A Nuclear receptor coacti 3.5 1.7E+02 0.0072 12.5 -0.3 16 7-22 57-72 (130)
8 2df7_A Structural polyprotein 3.1 2.8E+02 0.012 11.5 0.5 14 19-32 8-21 (458)
9 2eng_A Endoglucanase V; cellul 3.0 3.1E+02 0.013 11.3 1.2 17 8-26 99-115 (210)
10 2v6x_B DOA4-independent degrad 2.9 2.3E+02 0.0098 11.9 -0.0 12 17-28 3-14 (54)
No 1
>2i9s_A MESD, mesoderm development candidate 2; ferredoxin-like-fold, chaperone; NMR {Mus musculus}
Probab=15.75 E-value=56 Score=14.80 Aligned_cols=11 Identities=55% Similarity=1.180 Sum_probs=9.3
Q ss_pred EEEEEEECCCE
Q ss_conf 49999833880
Q 537021.9.peg.5 2 LLFFVAVRGDP 12 (38)
Q Consensus 2 llffvavrgdp 12 (38)
+..||.|.|||
T Consensus 18 lM~Fv~v~g~p 28 (97)
T 2i9s_A 18 LMMFVTVSGNP 28 (97)
T ss_dssp EEEEEECCSSS
T ss_pred EEEEEEECCCC
T ss_conf 69999967997
No 2
>2kgl_A Mesoderm development candidate 2; MESD, LRP5/6, chaperone, YWTD, WNT; NMR {Mus musculus} PDB: 2kmi_A 2rqk_A 2rqm_A
Probab=12.27 E-value=70 Score=14.36 Aligned_cols=11 Identities=55% Similarity=1.180 Sum_probs=9.2
Q ss_pred EEEEEEECCCE
Q ss_conf 49999833880
Q 537021.9.peg.5 2 LLFFVAVRGDP 12 (38)
Q Consensus 2 llffvavrgdp 12 (38)
++.||.|+|+|
T Consensus 76 lM~FV~v~g~p 86 (195)
T 2kgl_A 76 LMMFVTVSGNP 86 (195)
T ss_dssp CEEEEESSSCS
T ss_pred EEEEEEECCCC
T ss_conf 48999868999
No 3
>1x99_A Lectin, XCL lectin; fungal lectin, sugar binding protein; HET: MSE; 1.40A {Xerocomus chrysenteron} SCOP: b.97.1.2 PDB: 1xi0_A
Probab=10.66 E-value=1e+02 Score=13.59 Aligned_cols=24 Identities=29% Similarity=0.533 Sum_probs=19.2
Q ss_pred EEEEEEECCCEEEEEEEEECCHHH
Q ss_conf 499998338808999997088589
Q 537021.9.peg.5 2 LLFFVAVRGDPFFLIVMVQNTPRF 25 (38)
Q Consensus 2 llffvavrgdpfflivmvqntprf 25 (38)
.|-|.+-.||-|+.++-|.|-.|.
T Consensus 56 ~LRf~~~~Ge~F~Va~GvHNYk~W 79 (145)
T 1x99_A 56 MLRFMSTKGERITVAVGVHNYKRW 79 (145)
T ss_dssp EEEEEETTCCEEEEEEEEETTEEE
T ss_pred EEEEECCCCCEEEEEEEEECCCCH
T ss_conf 699974899889999953048733
No 4
>3lgo_A Protein SLM4; roadblock/LC7, domain SWAP, autophagy, membrane, transmembra transport, vacuole, protein binding; 2.85A {Saccharomyces cerevisiae}
Probab=5.39 E-value=66 Score=14.45 Aligned_cols=29 Identities=28% Similarity=0.470 Sum_probs=19.9
Q ss_pred CEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 94999983388089999970885899999999763
Q 537021.9.peg.5 1 LLLFFVAVRGDPFFLIVMVQNTPRFLKSLLLLFSS 35 (38)
Q Consensus 1 lllffvavrgdpfflivmvqntprflksllllfss 35 (38)
|||.|.|-++-|+=|.|| -+|..+.-|++
T Consensus 137 LLLlfIA~~~fPyGLLvm------KmK~al~af~~ 165 (172)
T 3lgo_A 137 LLLLFIAEGSFPYGLLVI------KIERAMRELTD 165 (172)
T ss_dssp EEEEEEECTTSCHHHHHH------HHHHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHH------HHHHHHHHHHH
T ss_conf 588777168887248999------99999999998
No 5
>2ofc_A Sclerotium rolfsii lectin; dual specificity, sugar binding protein; 1.11A {Athelia rolfsii} PDB: 2ofd_A* 2ofe_A*
Probab=5.25 E-value=1.9e+02 Score=12.30 Aligned_cols=24 Identities=33% Similarity=0.387 Sum_probs=18.7
Q ss_pred EEEEEEECCCEEEEEEEEECCHHH
Q ss_conf 499998338808999997088589
Q 537021.9.peg.5 2 LLFFVAVRGDPFFLIVMVQNTPRF 25 (38)
Q Consensus 2 llffvavrgdpfflivmvqntprf 25 (38)
.|-|.+-.||-|+.++-|.|--|.
T Consensus 53 ~LRf~~~~Ge~F~VavGvHNYk~W 76 (142)
T 2ofc_A 53 TLRFHADNGESFTATFGVHNYKRW 76 (142)
T ss_dssp EEEEEETTSCEEEEEEEEETTEEE
T ss_pred EEEEECCCCCEEEEEEEEECCCCC
T ss_conf 588864899679999986428741
No 6
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, sialic acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=4.13 E-value=2.4e+02 Score=11.88 Aligned_cols=20 Identities=30% Similarity=0.416 Sum_probs=17.3
Q ss_pred EEEEEEECCCEEEEEEEEEC
Q ss_conf 49999833880899999708
Q 537021.9.peg.5 2 LLFFVAVRGDPFFLIVMVQN 21 (38)
Q Consensus 2 llffvavrgdpfflivmvqn 21 (38)
-+.|-||-|.|.=++-.++|
T Consensus 130 ~~hffAVGGePLdlqgi~~n 149 (289)
T 1vps_A 130 QYHVFAVGGEPLDLQGLVTD 149 (289)
T ss_dssp EEEEEEEESSCEEEEECCSC
T ss_pred EEEEEEECCCCEEEEEEECC
T ss_conf 38999836864477887147
No 7
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=3.48 E-value=1.7e+02 Score=12.54 Aligned_cols=16 Identities=25% Similarity=0.590 Sum_probs=11.6
Q ss_pred EECCCEEEEEEEEECC
Q ss_conf 8338808999997088
Q 537021.9.peg.5 7 AVRGDPFFLIVMVQNT 22 (38)
Q Consensus 7 avrgdpfflivmvqnt 22 (38)
+-||-||-.+|.-||.
T Consensus 57 s~~G~~yaIlVt~qn~ 72 (130)
T 1v95_A 57 SRGGSPFAIVITQQHQ 72 (130)
T ss_dssp HHHTCSEEEEECHHHH
T ss_pred HHCCCCEEEEEECCCH
T ss_conf 7579836999812406
No 8
>2df7_A Structural polyprotein VP2; icosahedral capsid, immunogen, epitope, calcium, surface loop,, virus like particle; 2.60A {Infectious bursal disease virus} SCOP: b.121.4.9 PDB: 2gsy_A 3fbm_A 1wcd_J 1wce_A
Probab=3.11 E-value=2.8e+02 Score=11.53 Aligned_cols=14 Identities=36% Similarity=0.555 Sum_probs=9.8
Q ss_pred EECCHHHHHHHHHH
Q ss_conf 70885899999999
Q 537021.9.peg.5 19 VQNTPRFLKSLLLL 32 (38)
Q Consensus 19 vqntprflksllll 32 (38)
.|.+-+||||+|+-
T Consensus 8 ~~~~~~ylkSil~P 21 (458)
T 2df7_A 8 TQQIVPFIRSLLMP 21 (458)
T ss_dssp ---CCHHHHHHHCG
T ss_pred HHHHHHHHHHHHCC
T ss_conf 67889999885385
No 9
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=2.99 E-value=3.1e+02 Score=11.33 Aligned_cols=17 Identities=29% Similarity=0.280 Sum_probs=11.0
Q ss_pred ECCCEEEEEEEEECCHHHH
Q ss_conf 3388089999970885899
Q 537021.9.peg.5 8 VRGDPFFLIVMVQNTPRFL 26 (38)
Q Consensus 8 vrgdpfflivmvqntprfl 26 (38)
+.|. -+|||+.||---|
T Consensus 99 ~~GK--kmiVQ~tNtGgDl 115 (210)
T 2eng_A 99 VAGK--KMVVQSTSTGGDL 115 (210)
T ss_dssp GTTC--EEEEEEEEC----
T ss_pred CCCC--EEEEEEECCCCCC
T ss_conf 6777--6899973136757
No 10
>2v6x_B DOA4-independent degradation protein 4; protein transport, vacuole, endosome, cytoplasm, transport, ESCRT-III, MVB, VPS2, VPS4, SKD1; 1.98A {Saccharomyces cerevisiae}
Probab=2.91 E-value=2.3e+02 Score=11.90 Aligned_cols=12 Identities=50% Similarity=0.576 Sum_probs=8.0
Q ss_pred EEEECCHHHHHH
Q ss_conf 997088589999
Q 537021.9.peg.5 17 VMVQNTPRFLKS 28 (38)
Q Consensus 17 vmvqntprflks 28 (38)
-|.|+||.-+-|
T Consensus 3 ~~lQ~tPQn~is 14 (54)
T 2v6x_B 3 HMLQSTPQNLVS 14 (54)
T ss_dssp CCCCCCCHHHHT
T ss_pred HHHHHCCHHHHC
T ss_conf 053317086751
Done!