Query         537021.9.peg.598_1
Match_columns 38
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 33803
Date          Wed May 25 00:37:15 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_598.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >1rz4_A Eukaryotic translation  13.2      27 0.00079   17.7  -1.3   21    2-22     15-35  (155)
  2 >1q20_A SULT2B1B, sulfotransfe  11.5      38  0.0011   17.0  -0.9   12    8-19     16-27  (29)
  3 >2eu9_A Dual specificity prote   9.9      48  0.0014   16.5  -0.9   18    5-22      2-19  (43)
  4 >1q1q_A SULT2B1A, sulfotransfe   8.5      58  0.0017   16.1  -0.9   12    8-19     29-40  (42)
  5 >3kvc_A Retinoid isomerohydrol   5.8 1.5E+02  0.0045   14.1   0.1   10   13-22     10-19  (178)
  6 >1muk_A Minor core protein lam   5.5      64  0.0019   15.9  -1.9   19   16-34     45-63  (109)
  7 >3cb4_D GTP-binding protein LE   5.1 1.6E+02  0.0046   14.0  -0.2   13   25-37     35-47  (121)
  8 >1u6g_C TIP120 protein, CAND1;   4.6   1E+02   0.003   15.0  -1.5   21    2-22     15-35  (82)
  9 >3kvc_A Retinoid isomerohydrol   4.3 2.6E+02  0.0077   13.0   0.5   10   12-21     97-106 (113)
 10 >2qnt_A AGR_C_3434P, uncharact   4.2 3.3E+02  0.0099   12.4   1.0   30    6-35     35-64  (68)

No 1  
>>1rz4_A Eukaryotic translation initiation factor 3 subunit 11; heat analogous motif, winged-helix, biosynthetic protein; 2.10A {Homo sapiens} (A:1-127,A:199-226)
Probab=13.24  E-value=27  Score=17.75  Aligned_cols=21  Identities=43%  Similarity=0.578  Sum_probs=16.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             752013881002110020142
Q 537021.9.peg.5    2 LNSAAHDNPENLSMTENYVIP   22 (38)
Q Consensus         2 lnsaahdnpenlsmtenyvip   22 (38)
                      |++...-|||||..-|+||--
T Consensus        15 L~gidRYNPenL~~LE~YV~~   35 (155)
T 1rz4_A           15 LKGIDRYNPENLATLERYVET   35 (155)
T ss_dssp             HHSGGGGCGGGHHHHHHHHHH
T ss_pred             HHCCCCCCHHHHHHHHHHHHH
T ss_conf             837433787888999999999


No 2  
>>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A {Homo sapiens} (A:16-44)
Probab=11.47  E-value=38  Score=16.99  Aligned_cols=12  Identities=33%  Similarity=0.396  Sum_probs=9.1

Q ss_pred             CCCCCCCCCCCC
Q ss_conf             881002110020
Q 537021.9.peg.5    8 DNPENLSMTENY   19 (38)
Q Consensus         8 dnpenlsmteny   19 (38)
                      -.||.+||.||-
T Consensus        16 yspesis~aen~   27 (29)
T 1q20_A           16 YSLESISLAENT   27 (29)
T ss_dssp             BCHHHHHHHHHC
T ss_pred             CCHHHHHHHHHC
T ss_conf             899999999956


No 3  
>>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2exe_A (A:239-281)
Probab=9.94  E-value=48  Score=16.53  Aligned_cols=18  Identities=39%  Similarity=0.595  Sum_probs=14.3

Q ss_pred             CCCCCCCCCCCCCCCCCC
Q ss_conf             013881002110020142
Q 537021.9.peg.5    5 AAHDNPENLSMTENYVIP   22 (38)
Q Consensus         5 aahdnpenlsmtenyvip   22 (38)
                      ..|||-|.|.|-|.-.-|
T Consensus         2 qTHdnlEHLAMMErvlGp   19 (43)
T 2eu9_A            2 QTHENREHLVMMEKILGP   19 (43)
T ss_dssp             CCSSHHHHHHHHHHHHCC
T ss_pred             CCCCHHHHHHHHHHHCCC
T ss_conf             657778887767661478


No 4  
>>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens} (A:1-42)
Probab=8.49  E-value=58  Score=16.13  Aligned_cols=12  Identities=33%  Similarity=0.396  Sum_probs=8.6

Q ss_pred             CCCCCCCCCCCC
Q ss_conf             881002110020
Q 537021.9.peg.5    8 DNPENLSMTENY   19 (38)
Q Consensus         8 dnpenlsmteny   19 (38)
                      -.||.+||.||-
T Consensus        29 YspESis~aEN~   40 (42)
T 1q1q_A           29 YSLESISLAENT   40 (42)
T ss_dssp             BCHHHHHHHHHC
T ss_pred             CCHHHHHHHHHC
T ss_conf             899999999856


No 5  
>>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A (A:234-411)
Probab=5.76  E-value=1.5e+02  Score=14.07  Aligned_cols=10  Identities=30%  Similarity=0.707  Sum_probs=7.0

Q ss_pred             CCCCCCCCCC
Q ss_conf             2110020142
Q 537021.9.peg.5   13 LSMTENYVIP   22 (38)
Q Consensus        13 lsmtenyvip   22 (38)
                      ..|||||+|=
T Consensus        10 f~iTeny~V~   19 (178)
T 3kvc_A           10 FGLTPNYIVF   19 (178)
T ss_dssp             CEECSSEEEE
T ss_pred             EEECCCEEEE
T ss_conf             6511766899


No 6  
>>1muk_A Minor core protein lambda 3; single subunit polymerase fold, fingers, PALM, thumb, right hand configuration, viral protein; 2.50A {Reovirus SP} (A:60-148,A:203-222)
Probab=5.52  E-value=64  Score=15.90  Aligned_cols=19  Identities=26%  Similarity=0.440  Sum_probs=14.2

Q ss_pred             CCCCCCCHHHHHHHHHHHH
Q ss_conf             0020142177999998655
Q 537021.9.peg.5   16 TENYVIPHYGVLKEIISRH   34 (38)
Q Consensus        16 tenyviphygvlkeiisrh   34 (38)
                      +--..||.||-|.++|+..
T Consensus        45 sPl~tip~YG~L~~~Ie~d   63 (109)
T 1muk_A           45 EPHETLTSYGRLSEAIENR   63 (109)
T ss_dssp             EECSSCTTEEEECHHHHHH
T ss_pred             CHHHCCCCCCCCCHHHHCC
T ss_conf             4222167655106634234


No 7  
>>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane, nucleotide-binding, periplasm, translation; 2.80A {Escherichia coli K12} PDB: 3deg_C* (D:479-599)
Probab=5.13  E-value=1.6e+02  Score=14.04  Aligned_cols=13  Identities=31%  Similarity=0.726  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             7999998655305
Q 537021.9.peg.5   25 GVLKEIISRHKFS   37 (38)
Q Consensus        25 gvlkeiisrhkfs   37 (38)
                      .-|||+|.|+-|.
T Consensus        35 ~kLKe~IPrq~fe   47 (121)
T 3cb4_D           35 EKMKDLIPRQQFD   47 (121)
T ss_dssp             HHHHHHSCSCSSC
T ss_pred             HHHHHCCCCCCCC
T ss_conf             6325318744304


No 8  
>>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} (C:1016-1097)
Probab=4.56  E-value=1e+02  Score=14.96  Aligned_cols=21  Identities=38%  Similarity=0.575  Sum_probs=12.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             752013881002110020142
Q 537021.9.peg.5    2 LNSAAHDNPENLSMTENYVIP   22 (38)
Q Consensus         2 lnsaahdnpenlsmtenyvip   22 (38)
                      ||||+|..|.-+.-.-+-+.|
T Consensus        15 lnsa~hnkp~li~~~l~~iLP   35 (82)
T 1u6g_C           15 FNSAAHNKPSLIRDLLDTVLP   35 (82)
T ss_dssp             HHHHHHHCGGGTGGGHHHHHH
T ss_pred             HHHHHHHCHHHHHHHHHHHHH
T ss_conf             999998586889999999988


No 9  
>>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A (A:121-233)
Probab=4.32  E-value=2.6e+02  Score=12.95  Aligned_cols=10  Identities=0%  Similarity=0.232  Sum_probs=6.7

Q ss_pred             CCCCCCCCCC
Q ss_conf             0211002014
Q 537021.9.peg.5   12 NLSMTENYVI   21 (38)
Q Consensus        12 nlsmtenyvi   21 (38)
                      ...+||||+|
T Consensus        97 dfaiTe~y~V  106 (113)
T 3kvc_A           97 EDPISKSEIV  106 (113)
T ss_dssp             CCGGGGCEEE
T ss_pred             ECCCCCEEEE
T ss_conf             0466750378


No 10 
>>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family related protein, PSI-2; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} (A:1-68)
Probab=4.21  E-value=3.3e+02  Score=12.44  Aligned_cols=30  Identities=20%  Similarity=0.154  Sum_probs=23.6

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             138810021100201421779999986553
Q 537021.9.peg.5    6 AHDNPENLSMTENYVIPHYGVLKEIISRHK   35 (38)
Q Consensus         6 ahdnpenlsmtenyviphygvlkeiisrhk   35 (38)
                      -.|+-+|.++++..+|-.-...++.|.+..
T Consensus        35 i~D~G~NV~f~~GfaLQ~~~~w~~~i~~~~   64 (68)
T 2qnt_A           35 LEDFGSFVLFETGFAIHEGRSLEETIWRTS   64 (68)
T ss_dssp             EEECSSEEEETTSCEEEEHHHHHHHHHSCC
T ss_pred             EEECCCCEEEEEEEEECCCCCHHHHCCCCC
T ss_conf             985587304554432214530122202467


Done!