RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= 537021.9.peg.598_1 (38 letters) >d1rz4a2 a.118.1.18 (A:2-131) Eukaryotic translation initiation factor 3 subunit 12, eIF3k, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 130 Score = 23.9 bits (52), Expect = 3.9 Identities = 10/20 (50%), Positives = 11/20 (55%) Query: 1 LLNSAAHDNPENLSMTENYV 20 LL NPENL+ E YV Sbjct: 13 LLKGIDRYNPENLATLERYV 32 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.314 0.131 0.374 Gapped Lambda K H 0.267 0.0662 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 139,761 Number of extensions: 3218 Number of successful extensions: 5 Number of sequences better than 10.0: 1 Number of HSP's gapped: 5 Number of HSP's successfully gapped: 1 Length of query: 38 Length of database: 2,407,596 Length adjustment: 11 Effective length of query: 27 Effective length of database: 2,256,566 Effective search space: 60927282 Effective search space used: 60927282 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 47 (22.0 bits)