RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= 537021.9.peg.603_1 (37 letters) >gnl|CDD|34553 COG4945, COG4945, Membrane-anchored protein predicted to be involved in regulation of amylopullulanase [Carbohydrate transport and metabolism]. Length = 570 Score = 23.8 bits (51), Expect = 10.0 Identities = 7/22 (31%), Positives = 10/22 (45%) Query: 13 IKLRGWQYGEEFMLRTYSGESL 34 I + GW + + TYS L Sbjct: 106 IYISGWATYVQTLTGTYSNGIL 127 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.321 0.138 0.414 Gapped Lambda K H 0.267 0.0543 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 449,382 Number of extensions: 10814 Number of successful extensions: 16 Number of sequences better than 10.0: 1 Number of HSP's gapped: 16 Number of HSP's successfully gapped: 1 Length of query: 37 Length of database: 6,263,737 Length adjustment: 11 Effective length of query: 26 Effective length of database: 6,026,038 Effective search space: 156676988 Effective search space used: 156676988 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 51 (23.8 bits)