Query         537021.9.peg.683_1
Match_columns 37
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 33803
Date          Wed May 25 07:53:04 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_683.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >2e50_A Protein SET; histone c   9.4 1.8E+02  0.0052   14.0   1.9   26    8-33     56-81  (162)
  2 >2zd7_A VPS75, vacuolar protei   9.2 1.8E+02  0.0052   14.0   1.8   25    8-32     46-71  (210)
  3 >3fs3_A Nucleosome assembly pr   8.8 1.8E+02  0.0054   13.9   1.8   25    9-33     26-50  (151)
  4 >2hlg_A Fruit-specific protein   8.5      69   0.002   15.9  -0.5   12   19-30      2-13  (39)
  5 >1x48_A Interferon-induced, do   8.1 1.3E+02  0.0037   14.7   0.6   16   19-34     12-27  (88)
  6 >2oqb_A Histone-arginine methy   6.8 2.5E+02  0.0073   13.3   1.6   24   13-36     56-82  (117)
  7 >1qu6_A Protein kinase PKR; ds   5.7 1.4E+02  0.0042   14.5  -0.1   16   18-33     18-33  (92)
  8 >1r1h_A Neprilysin; enkephalin   5.4   2E+02  0.0058   13.8   0.5   22   15-36     90-111 (115)
  9 >2fml_A MUTT/nudix family prot   5.3 2.1E+02  0.0063   13.6   0.6   11   27-37      6-16  (57)
 10 >2bol_A TSP36, small heat shoc   5.0 2.1E+02  0.0063   13.6   0.5   15   20-34     30-44  (159)

No 1  
>>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} (A:64-225)
Probab=9.43  E-value=1.8e+02  Score=14.01  Aligned_cols=26  Identities=23%  Similarity=0.358  Sum_probs=20.1

Q ss_pred             CCCEEEEEEEEECHHHHCCCCEEEEC
Q ss_conf             24037999975005531678726531
Q 537021.9.peg.6    8 AKSFSLIFQFTINEYCRSNRNSITFS   33 (37)
Q Consensus         8 aksfslifqftineycrsnrnsitfs   33 (37)
                      ..+|.+.|.|.-|+|-...--+.+|.
T Consensus        56 ~~~f~i~F~F~~N~yF~n~~L~K~~~   81 (162)
T 2e50_A           56 KSGYRIDFYFDENPYFENKVLSKEFH   81 (162)
T ss_dssp             CCCEEEEEEECSCSSBSCSEEEEEEC
T ss_pred             CCCEEEEEEECCCCCCCCCEEEEEEE
T ss_conf             77558999968887546776899999


No 2  
>>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3c9d_A 3c9b_A 3dm7_A (A:55-264)
Probab=9.19  E-value=1.8e+02  Score=14.00  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=18.0

Q ss_pred             CCCEEEEEEEEE-CHHHHCCCCEEEE
Q ss_conf             240379999750-0553167872653
Q 537021.9.peg.6    8 AKSFSLIFQFTI-NEYCRSNRNSITF   32 (37)
Q Consensus         8 aksfslifqfti-neycrsnrnsitf   32 (37)
                      ..+|.|.|+|.- |+|-....-..+|
T Consensus        46 ~~~f~l~F~F~~~NpyF~n~~LtK~~   71 (210)
T 2zd7_A           46 TRDFSITFHFHGIEGDFKEQQVTKVF   71 (210)
T ss_dssp             TTCEEEEEEECCBTTTBCCEEEEEEE
T ss_pred             CCCEEEEEEECCCCCCCCCCEEEEEE
T ss_conf             88558999868888876677589999


No 3  
>>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, chaperone; 2.30A {Plasmodium falciparum 3D7} PDB: 3hfd_A 3gyw_A 3gyv_A (A:131-281)
Probab=8.82  E-value=1.8e+02  Score=13.93  Aligned_cols=25  Identities=24%  Similarity=0.432  Sum_probs=18.4

Q ss_pred             CCEEEEEEEEECHHHHCCCCEEEEC
Q ss_conf             4037999975005531678726531
Q 537021.9.peg.6    9 KSFSLIFQFTINEYCRSNRNSITFS   33 (37)
Q Consensus         9 ksfslifqftineycrsnrnsitfs   33 (37)
                      .+|.+.|.|.-|+|-+..--.-+|.
T Consensus        26 ~~f~i~F~F~~NpyF~N~~L~K~y~   50 (151)
T 3fs3_A           26 EGFILSFYFATNPFFSNSVLTKTYH   50 (151)
T ss_dssp             -CEEEEEEECSCSSBCCSEEEEEEE
T ss_pred             CCEEEEEEECCCCCCCCCEEEEEEE
T ss_conf             8658999847877766655999999


No 4  
>>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum} (A:)
Probab=8.54  E-value=69  Score=15.94  Aligned_cols=12  Identities=50%  Similarity=0.739  Sum_probs=8.4

Q ss_pred             ECHHHHCCCCEE
Q ss_conf             005531678726
Q 537021.9.peg.6   19 INEYCRSNRNSI   30 (37)
Q Consensus        19 ineycrsnrnsi   30 (37)
                      -|+||.+|..-|
T Consensus         2 CN~yCt~NsDC~   13 (39)
T 2hlg_A            2 CNEPCSSNSDCI   13 (39)
T ss_dssp             CSCBCSSSGGGS
T ss_pred             CCCCCCCCCCEE
T ss_conf             654236777855


No 5  
>>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} (A:)
Probab=8.07  E-value=1.3e+02  Score=14.71  Aligned_cols=16  Identities=13%  Similarity=0.544  Sum_probs=11.7

Q ss_pred             ECHHHHCCCCEEEECC
Q ss_conf             0055316787265314
Q 537021.9.peg.6   19 INEYCRSNRNSITFSS   34 (37)
Q Consensus        19 ineycrsnrnsitfss   34 (37)
                      ++|||..++-.+.|-.
T Consensus        12 L~e~~qk~~~~~~y~~   27 (88)
T 1x48_A           12 VNSFAQKKKLSVNYEQ   27 (88)
T ss_dssp             HHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHCCCCCCCC
T ss_conf             9999998689987402


No 6  
>>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulation, activation domain; 1.69A {Rattus norvegicus} (A:)
Probab=6.79  E-value=2.5e+02  Score=13.32  Aligned_cols=24  Identities=25%  Similarity=0.474  Sum_probs=18.6

Q ss_pred             EEEEEEEC---HHHHCCCCEEEECCCC
Q ss_conf             99997500---5531678726531476
Q 537021.9.peg.6   13 LIFQFTIN---EYCRSNRNSITFSSGE   36 (37)
Q Consensus        13 lifqftin---eycrsnrnsitfssge   36 (37)
                      -+|++++|   |-||-.+.|+-...|.
T Consensus        56 cvfkc~v~reTEC~rVgkqSfliTlG~   82 (117)
T 2oqb_A           56 CVFKCSVSRETECSRVGRQSFIITLGC   82 (117)
T ss_dssp             EEEEEEEETTSEEEEETTTEEEEEETT
T ss_pred             EEEEEEECCCCCCEEECCEEEEEEECC
T ss_conf             999998417841102325269999679


No 7  
>>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} (A:1-92)
Probab=5.69  E-value=1.4e+02  Score=14.46  Aligned_cols=16  Identities=13%  Similarity=0.382  Sum_probs=11.1

Q ss_pred             EECHHHHCCCCEEEEC
Q ss_conf             5005531678726531
Q 537021.9.peg.6   18 TINEYCRSNRNSITFS   33 (37)
Q Consensus        18 tineycrsnrnsitfs   33 (37)
                      .+||||..++....|-
T Consensus        18 ~L~e~~q~~~~~~~~~   33 (92)
T 1qu6_A           18 ELNTYRQKQGVVLKYQ   33 (92)
T ss_dssp             HHHHHHHHHTCCCEEE
T ss_pred             HHHHHHHHCCCCCEEE
T ss_conf             9999998559897299


No 8  
>>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} (A:92-118,A:422-509)
Probab=5.44  E-value=2e+02  Score=13.77  Aligned_cols=22  Identities=32%  Similarity=0.475  Sum_probs=17.7

Q ss_pred             EEEEECHHHHCCCCEEEECCCC
Q ss_conf             9975005531678726531476
Q 537021.9.peg.6   15 FQFTINEYCRSNRNSITFSSGE   36 (37)
Q Consensus        15 fqftineycrsnrnsitfssge   36 (37)
                      .-.+.|-|.-..+|+|+|..|-
T Consensus        90 ~p~~VNAyY~~~~N~IviPAGI  111 (115)
T 1r1h_A           90 GAAVVNAFYSSGRNQIVFPAGI  111 (115)
T ss_dssp             CSSCSCCEEETTTTEEEEEGGG
T ss_pred             CCCCCCCCCCCCCCCEEEEHHH
T ss_conf             7555532015200432200886


No 9  
>>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.26A {Enterococcus faecalis} (A:150-206)
Probab=5.29  E-value=2.1e+02  Score=13.61  Aligned_cols=11  Identities=27%  Similarity=0.456  Sum_probs=7.9

Q ss_pred             CCEEEECCCCC
Q ss_conf             87265314769
Q 537021.9.peg.6   27 RNSITFSSGEI   37 (37)
Q Consensus        27 rnsitfssgei   37 (37)
                      .|.|+.||||+
T Consensus         6 ~n~i~lssg~v   16 (57)
T 2fml_A            6 GQHITLSHEDV   16 (57)
T ss_dssp             TTEEEEEETTE
T ss_pred             CCHHCCCCCCH
T ss_conf             41113432000


No 10 
>>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} (A:60-94,A:191-314)
Probab=5.03  E-value=2.1e+02  Score=13.62  Aligned_cols=15  Identities=33%  Similarity=0.499  Sum_probs=12.3

Q ss_pred             CHHHHCCCCEEEECC
Q ss_conf             055316787265314
Q 537021.9.peg.6   20 NEYCRSNRNSITFSS   34 (37)
Q Consensus        20 neycrsnrnsitfss   34 (37)
                      -||...|-.|||||.
T Consensus        30 ~~~~~~nyksitfs~   44 (159)
T 2bol_A           30 LEYTQPNYKAIKLSP   44 (159)
T ss_dssp             TSSCSCCTTTEEEET
T ss_pred             CCCCCCCCCCCCCCC
T ss_conf             678887665314444


Done!